RNA–Protein interactions for RNA: ENST00000578501.5

CSNK1D-208, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-208ENST00000578501 SKIP12755 728 aa15.16■□□□□ 0.02
CSNK1D-208ENST00000578501 FGFR4P22455 802 aa15.16■□□□□ 0.02
CSNK1D-208ENST00000578501 BMPR1AP36894 532 aa15.16■□□□□ 0.02
CSNK1D-208ENST00000578501 PHKA2P46019 1235 aa15.16■□□□□ 0.02
CSNK1D-208ENST00000578501 TFDP1Q14186 410 aa15.16■□□□□ 0.02
CSNK1D-208ENST00000578501 ECM1Q16610 540 aa15.16■□□□□ 0.02
CSNK1D-208ENST00000578501 KRT79Q5XKE5 535 aa15.16■□□□□ 0.02
CSNK1D-208ENST00000578501 ECHDC2Q86YB7 292 aa15.16■□□□□ 0.02
CSNK1D-208ENST00000578501 KCTD17Q8N5Z5 321 aa15.16■□□□□ 0.02
CSNK1D-208ENST00000578501 BMP2KQ9NSY1 1161 aaPredicted RBP15.16■□□□□ 0.02
CSNK1D-208ENST00000578501 AGPAT5Q9NUQ2 364 aa15.16■□□□□ 0.02
CSNK1D-208ENST00000578501 A0A087WWV3 80 aa15.15■□□□□ 0.02
CSNK1D-208ENST00000578501 ARHGEF35A5YM69 484 aa15.15■□□□□ 0.02
CSNK1D-208ENST00000578501 CYP11B2P19099 503 aa15.15■□□□□ 0.02
CSNK1D-208ENST00000578501 KCNA5P22460 613 aa15.15■□□□□ 0.02
CSNK1D-208ENST00000578501 PTENP60484 403 aa15.15■□□□□ 0.02
CSNK1D-208ENST00000578501 NAALADL2Q58DX5 795 aa15.15■□□□□ 0.02
CSNK1D-208ENST00000578501 FAM102BQ5T8I3 360 aa15.15■□□□□ 0.02
CSNK1D-208ENST00000578501 PADI6Q6TGC4 694 aa15.15■□□□□ 0.02
CSNK1D-208ENST00000578501 CATSPER4Q7RTX7 472 aa15.15■□□□□ 0.02
CSNK1D-208ENST00000578501 ZNF598Q86UK7 904 aaKnown RBP15.15■□□□□ 0.02
CSNK1D-208ENST00000578501 SNX29Q8TEQ0 813 aa15.15■□□□□ 0.02
CSNK1D-208ENST00000578501 GDPD5Q8WTR4 605 aa15.15■□□□□ 0.02
CSNK1D-208ENST00000578501 RSPH1Q8WYR4 309 aa15.15■□□□□ 0.02
CSNK1D-208ENST00000578501 MINDY3Q9H8M7 445 aa15.15■□□□□ 0.02
CSNK1D-208ENST00000578501 KIAA1024Q9UPX6 916 aa15.15■□□□□ 0.02
CSNK1D-208ENST00000578501 FAM50BQ9Y247 325 aa15.15■□□□□ 0.02
CSNK1D-208ENST00000578501 MRPL42Q9Y6G3 142 aaKnown RBP15.15■□□□□ 0.02
CSNK1D-208ENST00000578501 SLC26A4O43511 780 aa15.14■□□□□ 0.01
CSNK1D-208ENST00000578501 DCXO43602 365 aa15.14■□□□□ 0.01
CSNK1D-208ENST00000578501 USO1O60763 962 aaKnown RBP15.14■□□□□ 0.01
CSNK1D-208ENST00000578501 ZNF623O75123 536 aa15.14■□□□□ 0.01
CSNK1D-208ENST00000578501 PDIA4P13667 645 aaKnown RBP15.14■□□□□ 0.01
CSNK1D-208ENST00000578501 GLRA2P23416 452 aa15.14■□□□□ 0.01
CSNK1D-208ENST00000578501 PTPROQ16827 1216 aa15.14■□□□□ 0.01
CSNK1D-208ENST00000578501 HYIQ5T013 277 aa15.14■□□□□ 0.01
CSNK1D-208ENST00000578501 PTCRAQ6ISU1 281 aaPredicted RBP15.14■□□□□ 0.01
CSNK1D-208ENST00000578501 HSCBQ8IWL3 235 aa15.14■□□□□ 0.01
CSNK1D-208ENST00000578501 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.14■□□□□ 0.01
CSNK1D-208ENST00000578501 ASAP3Q8TDY4 903 aa15.14■□□□□ 0.01
CSNK1D-208ENST00000578501 P2RX5Q93086 422 aa15.14■□□□□ 0.01
CSNK1D-208ENST00000578501 AK8Q96MA6 479 aa15.14■□□□□ 0.01
CSNK1D-208ENST00000578501 FBXL18Q96ME1 805 aa15.14■□□□□ 0.01
CSNK1D-208ENST00000578501 MMTAG2Q9BU76 263 aaKnown RBP15.14■□□□□ 0.01
CSNK1D-208ENST00000578501 C11orf84Q9BUA3 381 aaPredicted RBP15.14■□□□□ 0.01
CSNK1D-208ENST00000578501 TMEM117Q9H0C3 514 aa15.14■□□□□ 0.01
CSNK1D-208ENST00000578501 POLR3FQ9H1D9 316 aaPredicted RBP15.14■□□□□ 0.01
CSNK1D-208ENST00000578501 DDX19AQ9NUU7 478 aaKnown RBP15.14■□□□□ 0.01
CSNK1D-208ENST00000578501 DNM3Q9UQ16 869 aa15.14■□□□□ 0.01
CSNK1D-208ENST00000578501 PIN4Q9Y237 131 aaKnown RBP15.14■□□□□ 0.01
CSNK1D-208ENST00000578501 RALGAPA2Q2PPJ7 1873 aa15.14■□□□□ 0.01
CSNK1D-208ENST00000578501 GRXCR2A6NFK2 248 aa15.13■□□□□ 0.01
CSNK1D-208ENST00000578501 TBKBP1A7MCY6 615 aa15.13■□□□□ 0.01
CSNK1D-208ENST00000578501 PP2D1A8MPX8 630 aa15.13■□□□□ 0.01
CSNK1D-208ENST00000578501 AXLP30530 894 aa15.13■□□□□ 0.01
CSNK1D-208ENST00000578501 HOXA11P31270 313 aaPredicted RBP15.13■□□□□ 0.01
CSNK1D-208ENST00000578501 CTNNB1P35222 781 aa15.13■□□□□ 0.01
CSNK1D-208ENST00000578501 GATMP50440 423 aa15.13■□□□□ 0.01
CSNK1D-208ENST00000578501 RAB27AP51159 221 aa15.13■□□□□ 0.01
CSNK1D-208ENST00000578501 RESTQ13127 1097 aa15.13■□□□□ 0.01
CSNK1D-208ENST00000578501 GPM6BQ13491 265 aa15.13■□□□□ 0.01
CSNK1D-208ENST00000578501 CAPSQ13938 189 aa15.13■□□□□ 0.01
CSNK1D-208ENST00000578501 PAN2Q504Q3 1202 aaKnown RBP15.13■□□□□ 0.01
CSNK1D-208ENST00000578501 TWF2Q6IBS0 349 aaKnown RBP15.13■□□□□ 0.01
CSNK1D-208ENST00000578501 MRPL38Q96DV4 380 aaKnown RBP15.13■□□□□ 0.01
CSNK1D-208ENST00000578501 CASD1Q96PB1 797 aa15.13■□□□□ 0.01
CSNK1D-208ENST00000578501 LMAN2LQ9H0V9 348 aa15.13■□□□□ 0.01
CSNK1D-208ENST00000578501 BHMT2Q9H2M3 363 aa15.13■□□□□ 0.01
CSNK1D-208ENST00000578501 RNF19AQ9NV58 838 aa15.13■□□□□ 0.01
CSNK1D-208ENST00000578501 MTMR6Q9Y217 621 aa15.13■□□□□ 0.01
CSNK1D-208ENST00000578501 COL4A4P53420 1690 aaPredicted RBP15.12■□□□□ 0.01
CSNK1D-208ENST00000578501 VWA3AA6NCI4 1184 aa15.12■□□□□ 0.01
CSNK1D-208ENST00000578501 STX6O43752 255 aa15.12■□□□□ 0.01
CSNK1D-208ENST00000578501 ERLIN2O94905 339 aa15.12■□□□□ 0.01
CSNK1D-208ENST00000578501 EYA4O95677 639 aa15.12■□□□□ 0.01
CSNK1D-208ENST00000578501 FGFR1P11362 822 aa15.12■□□□□ 0.01
CSNK1D-208ENST00000578501 IL9P15248 144 aa15.12■□□□□ 0.01
CSNK1D-208ENST00000578501 ATF7P17544 494 aaPredicted RBP15.12■□□□□ 0.01
CSNK1D-208ENST00000578501 CDC25AP30304 524 aa15.12■□□□□ 0.01
CSNK1D-208ENST00000578501 MBTD1Q05BQ5 628 aa15.12■□□□□ 0.01
CSNK1D-208ENST00000578501 NCBP1Q09161 790 aaKnown RBP15.12■□□□□ 0.01
CSNK1D-208ENST00000578501 SF3A1Q15459 793 aaKnown RBP15.12■□□□□ 0.01
CSNK1D-208ENST00000578501 CDCA2Q69YH5 1023 aaPredicted RBP15.12■□□□□ 0.01
CSNK1D-208ENST00000578501 CCDC51Q96ER9 411 aa15.12■□□□□ 0.01
CSNK1D-208ENST00000578501 NT5C3AQ9H0P0 336 aa15.12■□□□□ 0.01
CSNK1D-208ENST00000578501 ZSCAN16Q9H4T2 348 aaPredicted RBP15.12■□□□□ 0.01
CSNK1D-208ENST00000578501 GPRC5CQ9NQ84 441 aa15.12■□□□□ 0.01
CSNK1D-208ENST00000578501 AAASQ9NRG9 546 aa15.12■□□□□ 0.01
CSNK1D-208ENST00000578501 FAM105AQ9NUU6 356 aa15.12■□□□□ 0.01
CSNK1D-208ENST00000578501 PRKAG3Q9UGI9 489 aa15.12■□□□□ 0.01
CSNK1D-208ENST00000578501 IBSPP21815 317 aaPredicted RBP15.11■□□□□ 0.01
CSNK1D-208ENST00000578501 PPP2R5AQ15172 486 aa15.11■□□□□ 0.01
CSNK1D-208ENST00000578501 MAEAQ7L5Y9 396 aa15.11■□□□□ 0.01
CSNK1D-208ENST00000578501 ABI1Q8IZP0 508 aa15.11■□□□□ 0.01
CSNK1D-208ENST00000578501 KIFAP3Q92845 792 aa15.11■□□□□ 0.01
CSNK1D-208ENST00000578501 MFSD14AQ96MC6 490 aa15.11■□□□□ 0.01
CSNK1D-208ENST00000578501 FOXD4L1Q9NU39 408 aa15.11■□□□□ 0.01
CSNK1D-208ENST00000578501 TYW1Q9NV66 732 aaKnown RBP15.11■□□□□ 0.01
CSNK1D-208ENST00000578501 DAXXQ9UER7 740 aaPredicted RBP15.11■□□□□ 0.01
CSNK1D-208ENST00000578501 PLAGL2Q9UPG8 496 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms