RNA–Protein interactions for RNA: ENST00000578469.1

SREBF1-218, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-218ENST00000578469 LGR5O75473 907 aa18.56■□□□□ 0.56
SREBF1-218ENST00000578469 OFD1O75665 1012 aa18.56■□□□□ 0.56
SREBF1-218ENST00000578469 ATP4AP20648 1035 aa18.56■□□□□ 0.56
SREBF1-218ENST00000578469 SCP2P22307 547 aa18.56■□□□□ 0.56
SREBF1-218ENST00000578469 PSMC2P35998 433 aaKnown RBP18.56■□□□□ 0.56
SREBF1-218ENST00000578469 LAMC2Q13753 1193 aa18.56■□□□□ 0.56
SREBF1-218ENST00000578469 MAMDC4Q6UXC1 1216 aa18.56■□□□□ 0.56
SREBF1-218ENST00000578469 PLPPR4Q7Z2D5 763 aa18.56■□□□□ 0.56
SREBF1-218ENST00000578469 EXOC8Q8IYI6 725 aa18.56■□□□□ 0.56
SREBF1-218ENST00000578469 OR8K1Q8NGG5 319 aa18.56■□□□□ 0.56
SREBF1-218ENST00000578469 GLG1Q92896 1179 aa18.56■□□□□ 0.56
SREBF1-218ENST00000578469 PDLIM7Q9NR12 457 aa18.56■□□□□ 0.56
SREBF1-218ENST00000578469 AGPAT3Q9NRZ7 376 aa18.56■□□□□ 0.56
SREBF1-218ENST00000578469 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.56■□□□□ 0.56
SREBF1-218ENST00000578469 FRMD4BQ9Y2L6 1034 aa18.56■□□□□ 0.56
SREBF1-218ENST00000578469 A0A0C4DFX4 3053 aa18.55■□□□□ 0.56
SREBF1-218ENST00000578469 A0A1W2PQJ5 194 aa18.55■□□□□ 0.56
SREBF1-218ENST00000578469 RBM47A0AV96 593 aaKnown RBP18.55■□□□□ 0.56
SREBF1-218ENST00000578469 ZSCAN12O43309 604 aa18.55■□□□□ 0.56
SREBF1-218ENST00000578469 GH1P01241 217 aa18.55■□□□□ 0.56
SREBF1-218ENST00000578469 XRCC5P13010 732 aaKnown RBP18.55■□□□□ 0.56
SREBF1-218ENST00000578469 MNX1P50219 401 aaPredicted RBP18.55■□□□□ 0.56
SREBF1-218ENST00000578469 SLC26A2P50443 739 aa18.55■□□□□ 0.56
SREBF1-218ENST00000578469 EMC2Q15006 297 aa18.55■□□□□ 0.56
SREBF1-218ENST00000578469 TMTC1Q8IUR5 882 aa18.55■□□□□ 0.56
SREBF1-218ENST00000578469 TMEM139Q8IV31 216 aa18.55■□□□□ 0.56
SREBF1-218ENST00000578469 SLC9A9Q8IVB4 645 aa18.55■□□□□ 0.56
SREBF1-218ENST00000578469 KSR1Q8IVT5 923 aa18.55■□□□□ 0.56
SREBF1-218ENST00000578469 C12orf56Q8IXR9 622 aa18.55■□□□□ 0.56
SREBF1-218ENST00000578469 FAM186BQ8IYM0 893 aa18.55■□□□□ 0.56
SREBF1-218ENST00000578469 CCAR2Q8N163 923 aaKnown RBP18.55■□□□□ 0.56
SREBF1-218ENST00000578469 MSL3Q8N5Y2 521 aaKnown RBP18.55■□□□□ 0.56
SREBF1-218ENST00000578469 DEFB123Q8N688 67 aa18.55■□□□□ 0.56
SREBF1-218ENST00000578469 SOCS4Q8WXH5 440 aa18.55■□□□□ 0.56
SREBF1-218ENST00000578469 SLC7A3Q8WY07 619 aa18.55■□□□□ 0.56
SREBF1-218ENST00000578469 PCYT2Q99447 389 aa18.55■□□□□ 0.56
SREBF1-218ENST00000578469 NTPCRQ9BSD7 190 aaKnown RBP18.55■□□□□ 0.56
SREBF1-218ENST00000578469 ABHD10Q9NUJ1 306 aa18.55■□□□□ 0.56
SREBF1-218ENST00000578469 ZNHIT6Q9NWK9 470 aaKnown RBP18.55■□□□□ 0.56
SREBF1-218ENST00000578469 EMSYQ7Z589 1322 aa18.54■□□□□ 0.56
SREBF1-218ENST00000578469 TTC26A0AVF1 554 aa18.54■□□□□ 0.56
SREBF1-218ENST00000578469 AKAP3O75969 853 aa18.54■□□□□ 0.56
SREBF1-218ENST00000578469 AFPP02771 609 aaKnown RBP18.54■□□□□ 0.56
SREBF1-218ENST00000578469 NPTX2P47972 431 aa18.54■□□□□ 0.56
SREBF1-218ENST00000578469 ZBED6P86452 979 aa18.54■□□□□ 0.56
SREBF1-218ENST00000578469 PPP2R5AQ15172 486 aa18.54■□□□□ 0.56
SREBF1-218ENST00000578469 TDHQ8IZJ6 230 aa18.54■□□□□ 0.56
SREBF1-218ENST00000578469 NEK11Q8NG66 645 aa18.54■□□□□ 0.56
SREBF1-218ENST00000578469 BBXQ8WY36 941 aaPredicted RBP18.54■□□□□ 0.56
SREBF1-218ENST00000578469 EDEM3Q9BZQ6 932 aa18.54■□□□□ 0.56
SREBF1-218ENST00000578469 POLR3FQ9H1D9 316 aaPredicted RBP18.54■□□□□ 0.56
SREBF1-218ENST00000578469 SMARCAD1Q9H4L7 1026 aa18.54■□□□□ 0.56
SREBF1-218ENST00000578469 DHX33Q9H6R0 707 aaKnown RBP18.54■□□□□ 0.56
SREBF1-218ENST00000578469 MMRN2Q9H8L6 949 aa18.54■□□□□ 0.56
SREBF1-218ENST00000578469 XPNPEP1Q9NQW7 623 aa18.54■□□□□ 0.56
SREBF1-218ENST00000578469 PDGFCQ9NRA1 345 aa18.54■□□□□ 0.56
SREBF1-218ENST00000578469 DMAC2Q9NW81 257 aa18.54■□□□□ 0.56
SREBF1-218ENST00000578469 SIK3Q9Y2K2 1263 aa18.54■□□□□ 0.56
SREBF1-218ENST00000578469 WDR81Q562E7 1941 aa18.53■□□□□ 0.56
SREBF1-218ENST00000578469 EXOC3O60645 756 aa18.53■□□□□ 0.56
SREBF1-218ENST00000578469 FECHP22830 423 aa18.53■□□□□ 0.56
SREBF1-218ENST00000578469 CYP2J2P51589 502 aa18.53■□□□□ 0.56
SREBF1-218ENST00000578469 KCNH2Q12809 1159 aa18.53■□□□□ 0.56
SREBF1-218ENST00000578469 HSDL1Q3SXM5 330 aa18.53■□□□□ 0.56
SREBF1-218ENST00000578469 LRIT3Q3SXY7 679 aa18.53■□□□□ 0.56
SREBF1-218ENST00000578469 TAPT1Q6NXT6 567 aa18.53■□□□□ 0.56
SREBF1-218ENST00000578469 CYP26C1Q6V0L0 522 aa18.53■□□□□ 0.56
SREBF1-218ENST00000578469 TMEM161BQ8NDZ6 487 aa18.53■□□□□ 0.56
SREBF1-218ENST00000578469 TMEM174Q8WUU8 243 aa18.53■□□□□ 0.56
SREBF1-218ENST00000578469 MAML3Q96JK9 1138 aa18.53■□□□□ 0.56
SREBF1-218ENST00000578469 JPH2Q9BR39 696 aaPredicted RBP18.53■□□□□ 0.56
SREBF1-218ENST00000578469 GJD2Q9UKL4 321 aa18.53■□□□□ 0.56
SREBF1-218ENST00000578469 OGDHLQ9ULD0 1010 aa18.53■□□□□ 0.56
SREBF1-218ENST00000578469 TBX20Q9UMR3 447 aa18.53■□□□□ 0.56
SREBF1-218ENST00000578469 MYH9P35579 1960 aaKnown RBP18.53■□□□□ 0.56
SREBF1-218ENST00000578469 ARID2Q68CP9 1835 aa18.52■□□□□ 0.56
SREBF1-218ENST00000578469 DENND3A2RUS2 1198 aa18.52■□□□□ 0.56
SREBF1-218ENST00000578469 NKRFO15226 690 aaKnown RBP eCLIP18.52■□□□□ 0.562e-7■□□□□ 9.5
SREBF1-218ENST00000578469 GAS2O43903 313 aaKnown RBP18.52■□□□□ 0.56
SREBF1-218ENST00000578469 PRKAR2AP13861 404 aaKnown RBP18.52■□□□□ 0.56
SREBF1-218ENST00000578469 SYN1P17600 705 aa18.52■□□□□ 0.56
SREBF1-218ENST00000578469 MAGEA10P43363 369 aaPredicted RBP18.52■□□□□ 0.56
SREBF1-218ENST00000578469 TARBP2Q15633 366 aaKnown RBP18.52■□□□□ 0.56
SREBF1-218ENST00000578469 TCERG1LQ5VWI1 586 aa18.52■□□□□ 0.56
SREBF1-218ENST00000578469 E4F1Q66K89 784 aaPredicted RBP18.52■□□□□ 0.56
SREBF1-218ENST00000578469 MAP4K3Q8IVH8 894 aa18.52■□□□□ 0.56
SREBF1-218ENST00000578469 ATP8B4Q8TF62 1192 aa18.52■□□□□ 0.56
SREBF1-218ENST00000578469 TRIB2Q92519 343 aa18.52■□□□□ 0.56
SREBF1-218ENST00000578469 COPS5Q92905 334 aa18.52■□□□□ 0.56
SREBF1-218ENST00000578469 DNAJC7Q99615 494 aa18.52■□□□□ 0.56
SREBF1-218ENST00000578469 TINF2Q9BSI4 451 aa18.52■□□□□ 0.56
SREBF1-218ENST00000578469 UBE2OQ9C0C9 1292 aaKnown RBP18.52■□□□□ 0.56
SREBF1-218ENST00000578469 TTYH3Q9C0H2 523 aa18.52■□□□□ 0.56
SREBF1-218ENST00000578469 ABHD16BQ9H3Z7 469 aa18.52■□□□□ 0.56
SREBF1-218ENST00000578469 TRMT1Q9NXH9 659 aaKnown RBP18.52■□□□□ 0.56
SREBF1-218ENST00000578469 PLXNA1Q9UIW2 1896 aa18.52■□□□□ 0.55
SREBF1-218ENST00000578469 GOLGA6L9A6NEM1 432 aa18.51■□□□□ 0.55
SREBF1-218ENST00000578469 KIF2AO00139 706 aaPredicted RBP18.51■□□□□ 0.55
SREBF1-218ENST00000578469 SNAI1O95863 264 aaPredicted RBP18.51■□□□□ 0.55
SREBF1-218ENST00000578469 KRT13P13646 458 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms