RNA–Protein interactions for RNA: ENST00000578297.1

LIMD2-204, Transcript of LIM domain containing 2, humanhuman

TSL 2

Gene LIMD2, Length 760 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-204ENST00000578297 TRANK1O15050 2925 aa25.59■■□□□ 1.69
LIMD2-204ENST00000578297 LRRIQ4A6NIV6 560 aa25.58■■□□□ 1.69
LIMD2-204ENST00000578297 RFXAPO00287 272 aa25.58■■□□□ 1.69
LIMD2-204ENST00000578297 ERLIN2O94905 339 aa25.58■■□□□ 1.69
LIMD2-204ENST00000578297 LINC00271P0C7V0 271 aa25.58■■□□□ 1.69
LIMD2-204ENST00000578297 SKIP12755 728 aa25.58■■□□□ 1.69
LIMD2-204ENST00000578297 AXLP30530 894 aa25.58■■□□□ 1.69
LIMD2-204ENST00000578297 SLC12A3P55017 1021 aa25.58■■□□□ 1.69
LIMD2-204ENST00000578297 PPP2R5AQ15172 486 aa25.58■■□□□ 1.69
LIMD2-204ENST00000578297 ZNF598Q86UK7 904 aaKnown RBP25.58■■□□□ 1.69
LIMD2-204ENST00000578297 TMEM192Q8IY95 271 aa25.58■■□□□ 1.69
LIMD2-204ENST00000578297 LINC00301Q8NCQ3 95 aa25.58■■□□□ 1.69
LIMD2-204ENST00000578297 BSNDQ8WZ55 320 aa25.58■■□□□ 1.69
LIMD2-204ENST00000578297 CLIC6Q96NY7 704 aa25.58■■□□□ 1.69
LIMD2-204ENST00000578297 TIPINQ9BVW5 301 aa25.58■■□□□ 1.69
LIMD2-204ENST00000578297 TFIP11Q9UBB9 837 aaKnown RBP25.58■■□□□ 1.69
LIMD2-204ENST00000578297 RWDD3Q9Y3V2 267 aa25.58■■□□□ 1.69
LIMD2-204ENST00000578297 HOXA2O43364 376 aa25.57■■□□□ 1.68
LIMD2-204ENST00000578297 TSPAN1O60635 241 aa25.57■■□□□ 1.68
LIMD2-204ENST00000578297 PLA2G4BP0C869 781 aa25.57■■□□□ 1.68
LIMD2-204ENST00000578297 POU3F3P20264 500 aaPredicted RBP25.57■■□□□ 1.68
LIMD2-204ENST00000578297 NAMPTP43490 491 aa25.57■■□□□ 1.68
LIMD2-204ENST00000578297 GATMP50440 423 aa25.57■■□□□ 1.68
LIMD2-204ENST00000578297 NCBP1Q09161 790 aaKnown RBP25.57■■□□□ 1.68
LIMD2-204ENST00000578297 AMHR2Q16671 573 aa25.57■■□□□ 1.68
LIMD2-204ENST00000578297 EPC2Q52LR7 807 aa25.57■■□□□ 1.68
LIMD2-204ENST00000578297 KRI1Q8N9T8 703 aaKnown RBP25.57■■□□□ 1.68
LIMD2-204ENST00000578297 FBXO22Q8NEZ5 403 aa25.57■■□□□ 1.68
LIMD2-204ENST00000578297 EPSTI1Q96J88 318 aa25.57■■□□□ 1.68
LIMD2-204ENST00000578297 IFT74Q96LB3 600 aa25.57■■□□□ 1.68
LIMD2-204ENST00000578297 RUSC1Q9BVN2 902 aa25.57■■□□□ 1.68
LIMD2-204ENST00000578297 C2orf40Q9H1Z8 148 aa25.57■■□□□ 1.68
LIMD2-204ENST00000578297 POLD4Q9HCU8 107 aa25.57■■□□□ 1.68
LIMD2-204ENST00000578297 FAM105AQ9NUU6 356 aa25.57■■□□□ 1.68
LIMD2-204ENST00000578297 KCND2Q9NZV8 630 aa25.57■■□□□ 1.68
LIMD2-204ENST00000578297 FNDC1Q4ZHG4 1894 aaPredicted RBP25.57■■□□□ 1.68
LIMD2-204ENST00000578297 RALGAPA2Q2PPJ7 1873 aa25.56■■□□□ 1.68
LIMD2-204ENST00000578297 EYSQ5T1H1 3165 aa25.56■■□□□ 1.68
LIMD2-204ENST00000578297 ZNF623O75123 536 aa25.56■■□□□ 1.68
LIMD2-204ENST00000578297 FGFR1P11362 822 aa25.56■■□□□ 1.68
LIMD2-204ENST00000578297 ATF7P17544 494 aaPredicted RBP25.56■■□□□ 1.68
LIMD2-204ENST00000578297 IGFBP4P22692 258 aa25.56■■□□□ 1.68
LIMD2-204ENST00000578297 GUCY2CP25092 1073 aa25.56■■□□□ 1.68
LIMD2-204ENST00000578297 RAB27AP51159 221 aa25.56■■□□□ 1.68
LIMD2-204ENST00000578297 KARSQ15046 597 aaKnown RBP25.56■■□□□ 1.68
LIMD2-204ENST00000578297 STK38Q15208 465 aa25.56■■□□□ 1.68
LIMD2-204ENST00000578297 PAN2Q504Q3 1202 aaKnown RBP25.56■■□□□ 1.68
LIMD2-204ENST00000578297 SPECC1Q5M775 1068 aa25.56■■□□□ 1.68
LIMD2-204ENST00000578297 ZBTB8OSQ8IWT0 167 aa25.56■■□□□ 1.68
LIMD2-204ENST00000578297 RNF19AQ9NV58 838 aa25.56■■□□□ 1.68
LIMD2-204ENST00000578297 MRPL42Q9Y6G3 142 aaKnown RBP25.56■■□□□ 1.68
LIMD2-204ENST00000578297 NLRC5Q86WI3 1866 aa25.55■■□□□ 1.68
LIMD2-204ENST00000578297 TBKBP1A7MCY6 615 aa25.55■■□□□ 1.68
LIMD2-204ENST00000578297 C5orf67F2Z3F1 127 aa25.55■■□□□ 1.68
LIMD2-204ENST00000578297 LPXNO60711 386 aa25.55■■□□□ 1.68
LIMD2-204ENST00000578297 HIP1RO75146 1068 aa25.55■■□□□ 1.68
LIMD2-204ENST00000578297 YEATS4O95619 227 aa25.55■■□□□ 1.68
LIMD2-204ENST00000578297 SSBP05455 408 aaKnown RBP eCLIP25.55■■□□□ 1.68
LIMD2-204ENST00000578297 PLCG1P19174 1290 aa25.55■■□□□ 1.68
LIMD2-204ENST00000578297 BMPR1AP36894 532 aa25.55■■□□□ 1.68
LIMD2-204ENST00000578297 ATL3Q6DD88 541 aa25.55■■□□□ 1.68
LIMD2-204ENST00000578297 NOTUMQ6P988 496 aa25.55■■□□□ 1.68
LIMD2-204ENST00000578297 USP49Q70CQ1 688 aa25.55■■□□□ 1.68
LIMD2-204ENST00000578297 DAW1Q8N136 415 aa25.55■■□□□ 1.68
LIMD2-204ENST00000578297 RASSF8Q8NHQ8 419 aa25.55■■□□□ 1.68
LIMD2-204ENST00000578297 MAFAQ8NHW3 353 aaPredicted RBP25.55■■□□□ 1.68
LIMD2-204ENST00000578297 LRRC15Q8TF66 581 aa25.55■■□□□ 1.68
LIMD2-204ENST00000578297 SYMPKQ92797 1274 aaKnown RBP25.55■■□□□ 1.68
LIMD2-204ENST00000578297 PRIMPOLQ96LW4 560 aa25.55■■□□□ 1.68
LIMD2-204ENST00000578297 DRC1Q96MC2 740 aa25.55■■□□□ 1.68
LIMD2-204ENST00000578297 TMEM117Q9H0C3 514 aa25.55■■□□□ 1.68
LIMD2-204ENST00000578297 FZD8Q9H461 694 aa25.55■■□□□ 1.68
LIMD2-204ENST00000578297 SPTLC2O15270 562 aa25.54■■□□□ 1.68
LIMD2-204ENST00000578297 PPP6R2O75170 966 aa25.54■■□□□ 1.68
LIMD2-204ENST00000578297 RB1P06400 928 aa25.54■■□□□ 1.68
LIMD2-204ENST00000578297 FAM187BQ17R55 369 aa25.54■■□□□ 1.68
LIMD2-204ENST00000578297 UBXN11Q5T124 520 aa25.54■■□□□ 1.68
LIMD2-204ENST00000578297 PPP4R3CPQ6ZMV5 832 aa25.54■■□□□ 1.68
LIMD2-204ENST00000578297 RNF169Q8NCN4 708 aa25.54■■□□□ 1.68
LIMD2-204ENST00000578297 DEPTORQ8TB45 409 aa25.54■■□□□ 1.68
LIMD2-204ENST00000578297 GDPD5Q8WTR4 605 aa25.54■■□□□ 1.68
LIMD2-204ENST00000578297 CCDC51Q96ER9 411 aa25.54■■□□□ 1.68
LIMD2-204ENST00000578297 CASD1Q96PB1 797 aa25.54■■□□□ 1.68
LIMD2-204ENST00000578297 C17orf75Q9HAS0 396 aa25.54■■□□□ 1.68
LIMD2-204ENST00000578297 BLOC1S4Q9NUP1 217 aa25.54■■□□□ 1.68
LIMD2-204ENST00000578297 PRMT7Q9NVM4 692 aaPredicted RBP25.54■■□□□ 1.68
LIMD2-204ENST00000578297 H3BNC9 293 aa25.53■■□□□ 1.68
LIMD2-204ENST00000578297 BRD1O95696 1058 aa25.53■■□□□ 1.68
LIMD2-204ENST00000578297 ARF4P18085 180 aaPredicted RBP25.53■■□□□ 1.68
LIMD2-204ENST00000578297 CTNNB1P35222 781 aa25.53■■□□□ 1.68
LIMD2-204ENST00000578297 MAPK7Q13164 816 aa25.53■■□□□ 1.68
LIMD2-204ENST00000578297 MRPL10Q7Z7H8 261 aaKnown RBP25.53■■□□□ 1.68
LIMD2-204ENST00000578297 RAD54LQ92698 747 aa25.53■■□□□ 1.68
LIMD2-204ENST00000578297 CPB2Q96IY4 423 aa25.53■■□□□ 1.68
LIMD2-204ENST00000578297 PLVAPQ9BX97 442 aa25.53■■□□□ 1.68
LIMD2-204ENST00000578297 LMCD1Q9NZU5 365 aa25.53■■□□□ 1.68
LIMD2-204ENST00000578297 CCDC39Q9UFE4 941 aa25.53■■□□□ 1.68
LIMD2-204ENST00000578297 PCDHB2Q9Y5E7 798 aa25.53■■□□□ 1.68
LIMD2-204ENST00000578297 MTCH2Q9Y6C9 303 aa25.53■■□□□ 1.68
LIMD2-204ENST00000578297 COL4A4P53420 1690 aaPredicted RBP25.52■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms