RNA–Protein interactions for RNA: ENST00000578009.5

IFT20-205, Transcript of intraflagellar transport 20, humanhuman

TSL 3

Gene IFT20, Length 611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-205ENST00000578009 GJB2P29033 226 aa5.67□□□□□ -1.5
IFT20-205ENST00000578009 MRE11P49959 708 aa5.67□□□□□ -1.5
IFT20-205ENST00000578009 HMGA2P52926 109 aa5.67□□□□□ -1.5
IFT20-205ENST00000578009 PMS1P54277 932 aaKnown RBP5.67□□□□□ -1.5
IFT20-205ENST00000578009 RPS8P62241 208 aaKnown RBP5.67□□□□□ -1.5
IFT20-205ENST00000578009 HMGN5P82970 282 aaKnown RBP5.67□□□□□ -1.5
IFT20-205ENST00000578009 CHRNDQ07001 517 aa5.67□□□□□ -1.5
IFT20-205ENST00000578009 TBC1D10BQ4KMP7 808 aaPredicted RBP5.67□□□□□ -1.5
IFT20-205ENST00000578009 TBC1D9BQ66K14 1250 aa5.67□□□□□ -1.5
IFT20-205ENST00000578009 CCDC83Q8IWF9 413 aa5.67□□□□□ -1.5
IFT20-205ENST00000578009 TTC9BQ8N6N2 239 aa5.67□□□□□ -1.5
IFT20-205ENST00000578009 ADAMTS17Q8TE56 1095 aa5.67□□□□□ -1.5
IFT20-205ENST00000578009 GTF3C6Q969F1 213 aa5.67□□□□□ -1.5
IFT20-205ENST00000578009 NKD1Q969G9 470 aa5.67□□□□□ -1.5
IFT20-205ENST00000578009 TSPAN17Q96FV3 270 aa5.67□□□□□ -1.5
IFT20-205ENST00000578009 STRBPQ96SI9 672 aaKnown RBP5.67□□□□□ -1.5
IFT20-205ENST00000578009 C1QTNF3Q9BXJ4 246 aa5.67□□□□□ -1.5
IFT20-205ENST00000578009 SCAND2PQ9GZW5 306 aaPredicted RBP5.67□□□□□ -1.5
IFT20-205ENST00000578009 PIH1D3Q9NQM4 214 aaKnown RBP5.67□□□□□ -1.5
IFT20-205ENST00000578009 GGT7Q9UJ14 662 aa5.67□□□□□ -1.5
IFT20-205ENST00000578009 SF3B6Q9Y3B4 125 aaKnown RBP5.67□□□□□ -1.5
IFT20-205ENST00000578009 MYH3P11055 1940 aa5.67□□□□□ -1.5
IFT20-205ENST00000578009 PNPLA7Q6ZV29 1317 aa5.67□□□□□ -1.5
IFT20-205ENST00000578009 CARMIL3Q8ND23 1372 aa5.67□□□□□ -1.5
IFT20-205ENST00000578009 LAMB2P55268 1798 aa5.66□□□□□ -1.5
IFT20-205ENST00000578009 BCORQ6W2J9 1755 aa5.66□□□□□ -1.5
IFT20-205ENST00000578009 OVOL3O00110 214 aa5.66□□□□□ -1.5
IFT20-205ENST00000578009 ZNF213O14771 459 aa5.66□□□□□ -1.5
IFT20-205ENST00000578009 DHX16O60231 1041 aaKnown RBP5.66□□□□□ -1.5
IFT20-205ENST00000578009 LARGE1O95461 756 aa5.66□□□□□ -1.5
IFT20-205ENST00000578009 C6P13671 934 aa5.66□□□□□ -1.5
IFT20-205ENST00000578009 NCLP19338 710 aaKnown RBP5.66□□□□□ -1.5
IFT20-205ENST00000578009 TM4SF1P30408 202 aa5.66□□□□□ -1.5
IFT20-205ENST00000578009 MCM5P33992 734 aa5.66□□□□□ -1.5
IFT20-205ENST00000578009 RFC4P35249 363 aa5.66□□□□□ -1.5
IFT20-205ENST00000578009 NT5C2P49902 561 aa5.66□□□□□ -1.5
IFT20-205ENST00000578009 POU4F1Q01851 419 aa5.66□□□□□ -1.5
IFT20-205ENST00000578009 CACNB2Q08289 660 aaPredicted RBP5.66□□□□□ -1.5
IFT20-205ENST00000578009 ST3GAL1Q11201 340 aa5.66□□□□□ -1.5
IFT20-205ENST00000578009 RASGRF1Q13972 1273 aa5.66□□□□□ -1.5
IFT20-205ENST00000578009 CAVIN4Q5BKX8 364 aa5.66□□□□□ -1.5
IFT20-205ENST00000578009 AXDND1Q5T1B0 1012 aaPredicted RBP5.66□□□□□ -1.5
IFT20-205ENST00000578009 LARP1BQ659C4 914 aaKnown RBP5.66□□□□□ -1.5
IFT20-205ENST00000578009 ATL3Q6DD88 541 aa5.66□□□□□ -1.5
IFT20-205ENST00000578009 Q6ZUG5 572 aa5.66□□□□□ -1.5
IFT20-205ENST00000578009 C15orf52Q6ZUT6 534 aaKnown RBP5.66□□□□□ -1.5
IFT20-205ENST00000578009 STOX1Q6ZVD7 989 aa5.66□□□□□ -1.5
IFT20-205ENST00000578009 NOL8Q76FK4 1167 aaKnown RBP5.66□□□□□ -1.5
IFT20-205ENST00000578009 PTF1AQ7RTS3 328 aa5.66□□□□□ -1.5
IFT20-205ENST00000578009 PPFIBP1Q86W92 1011 aa5.66□□□□□ -1.5
IFT20-205ENST00000578009 NBPF5PQ86XG9 351 aaPredicted RBP5.66□□□□□ -1.5
IFT20-205ENST00000578009 DDX11Q96FC9 970 aa5.66□□□□□ -1.5
IFT20-205ENST00000578009 PEX11GQ96HA9 241 aa5.66□□□□□ -1.5
IFT20-205ENST00000578009 ZDHHC15Q96MV8 337 aa5.66□□□□□ -1.5
IFT20-205ENST00000578009 PUS7LQ9H0K6 701 aaKnown RBP5.66□□□□□ -1.5
IFT20-205ENST00000578009 NOL6Q9H6R4 1146 aaKnown RBP5.66□□□□□ -1.5
IFT20-205ENST00000578009 NUDT5Q9UKK9 219 aa5.66□□□□□ -1.5
IFT20-205ENST00000578009 DENND2AQ9ULE3 1009 aa5.66□□□□□ -1.5
IFT20-205ENST00000578009 MTMR6Q9Y217 621 aa5.66□□□□□ -1.5
IFT20-205ENST00000578009 RWDD3Q9Y3V2 267 aa5.66□□□□□ -1.5
IFT20-205ENST00000578009 FHOD1Q9Y613 1164 aa5.66□□□□□ -1.5
IFT20-205ENST00000578009 ZNF536O15090 1300 aa5.66□□□□□ -1.5
IFT20-205ENST00000578009 IDH1O75874 414 aaKnown RBP5.65□□□□□ -1.5
IFT20-205ENST00000578009 LETM1O95202 739 aaPredicted RBP5.65□□□□□ -1.5
IFT20-205ENST00000578009 CHGBP05060 677 aa5.65□□□□□ -1.5
IFT20-205ENST00000578009 PCP11498 1178 aaKnown RBP5.65□□□□□ -1.5
IFT20-205ENST00000578009 PDIA3P30101 505 aaKnown RBP5.65□□□□□ -1.5
IFT20-205ENST00000578009 GDF5P43026 501 aa5.65□□□□□ -1.5
IFT20-205ENST00000578009 TRDNQ13061 729 aa5.65□□□□□ -1.5
IFT20-205ENST00000578009 ANKRD39Q53RE8 183 aa5.65□□□□□ -1.5
IFT20-205ENST00000578009 NAA16Q6N069 864 aaPredicted RBP5.65□□□□□ -1.5
IFT20-205ENST00000578009 GIMAP6Q6P9H5 292 aa5.65□□□□□ -1.5
IFT20-205ENST00000578009 DNAJC14Q6Y2X3 702 aaPredicted RBP5.65□□□□□ -1.5
IFT20-205ENST00000578009 MB21D2Q8IYB1 491 aaPredicted RBP5.65□□□□□ -1.5
IFT20-205ENST00000578009 LZTR1Q8N653 840 aa5.65□□□□□ -1.5
IFT20-205ENST00000578009 NCOA7Q8NI08 942 aa5.65□□□□□ -1.5
IFT20-205ENST00000578009 SH3RF3Q8TEJ3 882 aaPredicted RBP5.65□□□□□ -1.5
IFT20-205ENST00000578009 CPA5Q8WXQ8 436 aa5.65□□□□□ -1.5
IFT20-205ENST00000578009 SYAP1Q96A49 352 aaPredicted RBP5.65□□□□□ -1.5
IFT20-205ENST00000578009 FAM84BQ96KN1 310 aaPredicted RBP5.65□□□□□ -1.5
IFT20-205ENST00000578009 NACAP1Q9BZK3 213 aa5.65□□□□□ -1.5
IFT20-205ENST00000578009 ZSCAN16Q9H4T2 348 aaPredicted RBP5.65□□□□□ -1.5
IFT20-205ENST00000578009 FBLN5Q9UBX5 448 aa5.65□□□□□ -1.5
IFT20-205ENST00000578009 SRP68Q9UHB9 627 aaKnown RBP5.65□□□□□ -1.5
IFT20-205ENST00000578009 ST6GALNAC2Q9UJ37 374 aa5.65□□□□□ -1.5
IFT20-205ENST00000578009 ELP1O95163 1332 aa5.65□□□□□ -1.51
IFT20-205ENST00000578009 ZNF532Q9HCE3 1301 aa5.65□□□□□ -1.51
IFT20-205ENST00000578009 SCN7AQ01118 1682 aa5.65□□□□□ -1.51
IFT20-205ENST00000578009 DDX60Q8IY21 1712 aaKnown RBP5.65□□□□□ -1.51
IFT20-205ENST00000578009 ARAP2Q8WZ64 1704 aa5.65□□□□□ -1.51
IFT20-205ENST00000578009 BTAF1O14981 1849 aa5.64□□□□□ -1.51
IFT20-205ENST00000578009 AKAP11Q9UKA4 1901 aa5.64□□□□□ -1.51
IFT20-205ENST00000578009 KLRG2A4D1S0 409 aaPredicted RBP5.64□□□□□ -1.51
IFT20-205ENST00000578009 PRC1O43663 620 aa5.64□□□□□ -1.51
IFT20-205ENST00000578009 XRCC6P12956 609 aaKnown RBP eCLIP5.64□□□□□ -1.51
IFT20-205ENST00000578009 CD247P20963 164 aa5.64□□□□□ -1.51
IFT20-205ENST00000578009 TACR2P21452 398 aa5.64□□□□□ -1.51
IFT20-205ENST00000578009 RCAN1P53805 252 aa5.64□□□□□ -1.51
IFT20-205ENST00000578009 UBE2HP62256 183 aa5.64□□□□□ -1.51
IFT20-205ENST00000578009 KIAA2012Q0VF49 1180 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms