RNA–Protein interactions for RNA: ENST00000577483.1

SSH2-205, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 1,630 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-205ENST00000577483 TCP11Q8WWU5 503 aa14.13□□□□□ -0.15
SSH2-205ENST00000577483 TMX3Q96JJ7 454 aa14.13□□□□□ -0.15
SSH2-205ENST00000577483 TBC1D32Q96NH3 1257 aa14.13□□□□□ -0.15
SSH2-205ENST00000577483 ANKEF1Q9NU02 776 aa14.13□□□□□ -0.15
SSH2-205ENST00000577483 FAM105AQ9NUU6 356 aa14.13□□□□□ -0.15
SSH2-205ENST00000577483 DGAT1O75907 488 aa14.12□□□□□ -0.15
SSH2-205ENST00000577483 EOMESO95936 686 aa14.12□□□□□ -0.15
SSH2-205ENST00000577483 LAG3P18627 525 aa14.12□□□□□ -0.15
SSH2-205ENST00000577483 ORC2Q13416 577 aaPredicted RBP14.12□□□□□ -0.15
SSH2-205ENST00000577483 GNL2Q13823 731 aaKnown RBP14.12□□□□□ -0.15
SSH2-205ENST00000577483 POTEGQ6S5H5 508 aa14.12□□□□□ -0.15
SSH2-205ENST00000577483 EP400NLQ6ZTU2 488 aa14.12□□□□□ -0.15
SSH2-205ENST00000577483 SRGAP1Q7Z6B7 1085 aa14.12□□□□□ -0.15
SSH2-205ENST00000577483 THNSL1Q8IYQ7 743 aa14.12□□□□□ -0.15
SSH2-205ENST00000577483 ABI1Q8IZP0 508 aa14.12□□□□□ -0.15
SSH2-205ENST00000577483 C4orf32Q8N8J7 132 aa14.12□□□□□ -0.15
SSH2-205ENST00000577483 ASAP3Q8TDY4 903 aa14.12□□□□□ -0.15
SSH2-205ENST00000577483 AAASQ9NRG9 546 aa14.12□□□□□ -0.15
SSH2-205ENST00000577483 HOXA11P31270 313 aaPredicted RBP14.12□□□□□ -0.15
SSH2-205ENST00000577483 TRAPPC10P48553 1259 aa14.12□□□□□ -0.15
SSH2-205ENST00000577483 ERVFC1P60507 584 aa14.12□□□□□ -0.15
SSH2-205ENST00000577483 CAPSQ13938 189 aa14.12□□□□□ -0.15
SSH2-205ENST00000577483 PTCRAQ6ISU1 281 aaPredicted RBP14.12□□□□□ -0.15
SSH2-205ENST00000577483 IGFLR1Q9H665 355 aa14.12□□□□□ -0.15
SSH2-205ENST00000577483 UPF2Q9HAU5 1272 aaKnown RBP14.12□□□□□ -0.15
SSH2-205ENST00000577483 TUFT1Q9NNX1 390 aa14.12□□□□□ -0.15
SSH2-205ENST00000577483 TLR9Q9NR96 1032 aa14.12□□□□□ -0.15
SSH2-205ENST00000577483 PCDHB6Q9Y5E3 794 aa14.12□□□□□ -0.15
SSH2-205ENST00000577483 ASAP2O43150 1006 aa14.11□□□□□ -0.15
SSH2-205ENST00000577483 USO1O60763 962 aaKnown RBP14.11□□□□□ -0.15
SSH2-205ENST00000577483 GLRA2P23416 452 aa14.11□□□□□ -0.15
SSH2-205ENST00000577483 ARL2P36404 184 aa14.11□□□□□ -0.15
SSH2-205ENST00000577483 UBE3AQ05086 875 aa14.11□□□□□ -0.15
SSH2-205ENST00000577483 UBXN11Q5T124 520 aa14.11□□□□□ -0.15
SSH2-205ENST00000577483 KCNT2Q6UVM3 1135 aa14.11□□□□□ -0.15
SSH2-205ENST00000577483 POLR3CQ9BUI4 534 aaPredicted RBP14.11□□□□□ -0.15
SSH2-205ENST00000577483 CD320Q9NPF0 282 aa14.11□□□□□ -0.15
SSH2-205ENST00000577483 GPRC5CQ9NQ84 441 aa14.11□□□□□ -0.15
SSH2-205ENST00000577483 NOL7Q9UMY1 257 aaKnown RBP14.11□□□□□ -0.15
SSH2-205ENST00000577483 PLXNA3P51805 1871 aa14.11□□□□□ -0.15
SSH2-205ENST00000577483 GRXCR2A6NFK2 248 aa14.1□□□□□ -0.15
SSH2-205ENST00000577483 ZNF623O75123 536 aa14.1□□□□□ -0.15
SSH2-205ENST00000577483 GLP2RO95838 553 aa14.1□□□□□ -0.15
SSH2-205ENST00000577483 RPA1P27694 616 aa14.1□□□□□ -0.15
SSH2-205ENST00000577483 GJB2P29033 226 aa14.1□□□□□ -0.15
SSH2-205ENST00000577483 RAB27AP51159 221 aa14.1□□□□□ -0.15
SSH2-205ENST00000577483 PTENP60484 403 aa14.1□□□□□ -0.15
SSH2-205ENST00000577483 PLCB3Q01970 1234 aa14.1□□□□□ -0.15
SSH2-205ENST00000577483 MBTD1Q05BQ5 628 aa14.1□□□□□ -0.15
SSH2-205ENST00000577483 MXD4Q14582 209 aaPredicted RBP14.1□□□□□ -0.15
SSH2-205ENST00000577483 CLUL1Q15846 466 aa14.1□□□□□ -0.15
SSH2-205ENST00000577483 ECM1Q16610 540 aa14.1□□□□□ -0.15
SSH2-205ENST00000577483 CSPP1Q1MSJ5 1256 aa14.1□□□□□ -0.15
SSH2-205ENST00000577483 RBM23Q86U06 439 aaKnown RBP14.1□□□□□ -0.15
SSH2-205ENST00000577483 IFNLR1Q8IU57 520 aaPredicted RBP14.1□□□□□ -0.15
SSH2-205ENST00000577483 MRPS27Q92552 414 aaKnown RBP14.1□□□□□ -0.15
SSH2-205ENST00000577483 KHSRPQ92945 711 aaKnown RBP eCLIP14.1□□□□□ -0.15
SSH2-205ENST00000577483 CCDC43Q96MW1 224 aaKnown RBP14.1□□□□□ -0.15
SSH2-205ENST00000577483 ZNF558Q96NG5 402 aa14.1□□□□□ -0.15
SSH2-205ENST00000577483 POLR3FQ9H1D9 316 aaPredicted RBP14.1□□□□□ -0.15
SSH2-205ENST00000577483 PCDHB2Q9Y5E7 798 aa14.1□□□□□ -0.15
SSH2-205ENST00000577483 FSCN2O14926 492 aa14.09□□□□□ -0.15
SSH2-205ENST00000577483 NCK2O43639 380 aa14.09□□□□□ -0.15
SSH2-205ENST00000577483 B4GALT3O60512 393 aa14.09□□□□□ -0.15
SSH2-205ENST00000577483 TSPAN1O60635 241 aa14.09□□□□□ -0.15
SSH2-205ENST00000577483 OFD1O75665 1012 aa14.09□□□□□ -0.15
SSH2-205ENST00000577483 XRCC6P12956 609 aaKnown RBP eCLIP14.09□□□□□ -0.15
SSH2-205ENST00000577483 NRIP1P48552 1158 aa14.09□□□□□ -0.15
SSH2-205ENST00000577483 FXR2P51116 673 aaKnown RBP eCLIP14.09□□□□□ -0.15
SSH2-205ENST00000577483 AFF1P51825 1210 aaKnown RBP14.09□□□□□ -0.15
SSH2-205ENST00000577483 RBM10P98175 930 aaKnown RBP14.09□□□□□ -0.15
SSH2-205ENST00000577483 PTGDRQ13258 359 aa14.09□□□□□ -0.15
SSH2-205ENST00000577483 ADAM15Q13444 863 aa14.09□□□□□ -0.15
SSH2-205ENST00000577483 AMHR2Q16671 573 aa14.09□□□□□ -0.15
SSH2-205ENST00000577483 AGMOQ6ZNB7 445 aa14.09□□□□□ -0.15
SSH2-205ENST00000577483 MAEAQ7L5Y9 396 aa14.09□□□□□ -0.15
SSH2-205ENST00000577483 TMEM173Q86WV6 379 aaPredicted RBP14.09□□□□□ -0.15
SSH2-205ENST00000577483 SLC39A11Q8N1S5 342 aa14.09□□□□□ -0.15
SSH2-205ENST00000577483 MRPL9Q9BYD2 267 aaKnown RBP14.09□□□□□ -0.15
SSH2-205ENST00000577483 TBC1D13Q9NVG8 400 aa14.09□□□□□ -0.15
SSH2-205ENST00000577483 DBR1Q9UK59 544 aaKnown RBP14.09□□□□□ -0.15
SSH2-205ENST00000577483 LZTS1Q9Y250 596 aa14.09□□□□□ -0.15
SSH2-205ENST00000577483 INPP5FQ9Y2H2 1132 aa14.09□□□□□ -0.15
SSH2-205ENST00000577483 C2orf16Q68DN1 1984 aa14.09□□□□□ -0.15
SSH2-205ENST00000577483 PDCD11Q14690 1871 aaKnown RBP14.09□□□□□ -0.15
SSH2-205ENST00000577483 NT5C1B-RDH14C9J2C7 533 aa14.08□□□□□ -0.15
SSH2-205ENST00000577483 PER2O15055 1255 aa14.08□□□□□ -0.15
SSH2-205ENST00000577483 ERLIN2O94905 339 aa14.08□□□□□ -0.15
SSH2-205ENST00000577483 SKIP12755 728 aa14.08□□□□□ -0.15
SSH2-205ENST00000577483 BCAR1P56945 870 aa14.08□□□□□ -0.15
SSH2-205ENST00000577483 TFDP1Q14186 410 aa14.08□□□□□ -0.15
SSH2-205ENST00000577483 IL17AQ16552 155 aa14.08□□□□□ -0.15
SSH2-205ENST00000577483 PLPP4Q5VZY2 271 aa14.08□□□□□ -0.15
SSH2-205ENST00000577483 FAM178BQ8IXR5 827 aa14.08□□□□□ -0.15
SSH2-205ENST00000577483 EFHBQ8N7U6 833 aa14.08□□□□□ -0.15
SSH2-205ENST00000577483 SMG8Q8ND04 991 aaKnown RBP14.08□□□□□ -0.15
SSH2-205ENST00000577483 CPB2Q96IY4 423 aa14.08□□□□□ -0.15
SSH2-205ENST00000577483 EIF2AQ9BY44 585 aaKnown RBP14.08□□□□□ -0.15
SSH2-205ENST00000577483 CLEC1BQ9P126 229 aa14.08□□□□□ -0.15
SSH2-205ENST00000577483 DENND4AQ7Z401 1863 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms