RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 LZTS1Q9Y250 596 aa19.44■□□□□ 0.7
SMG6-214ENST00000573827 MED24O75448 989 aa19.43■□□□□ 0.7
SMG6-214ENST00000573827 SRGAP2CP0DJJ0 459 aa19.43■□□□□ 0.7
SMG6-214ENST00000573827 XRCC6P12956 609 aaKnown RBP eCLIP19.43■□□□□ 0.7
SMG6-214ENST00000573827 ZNF174Q15697 407 aa19.43■□□□□ 0.7
SMG6-214ENST00000573827 AMHR2Q16671 573 aa19.43■□□□□ 0.7
SMG6-214ENST00000573827 CSPP1Q1MSJ5 1256 aa19.43■□□□□ 0.7
SMG6-214ENST00000573827 KCNT2Q6UVM3 1135 aa19.43■□□□□ 0.7
SMG6-214ENST00000573827 MRPL10Q7Z7H8 261 aaKnown RBP19.43■□□□□ 0.7
SMG6-214ENST00000573827 CATSPER3Q86XQ3 398 aa19.43■□□□□ 0.7
SMG6-214ENST00000573827 EFHBQ8N7U6 833 aa19.43■□□□□ 0.7
SMG6-214ENST00000573827 RNF169Q8NCN4 708 aa19.43■□□□□ 0.7
SMG6-214ENST00000573827 PIGOQ8TEQ8 1089 aa19.43■□□□□ 0.7
SMG6-214ENST00000573827 TCP11Q8WWU5 503 aa19.43■□□□□ 0.7
SMG6-214ENST00000573827 LPPQ93052 612 aa19.43■□□□□ 0.7
SMG6-214ENST00000573827 MTRQ99707 1265 aa19.43■□□□□ 0.7
SMG6-214ENST00000573827 FAM105AQ9NUU6 356 aa19.43■□□□□ 0.7
SMG6-214ENST00000573827 ASAP2O43150 1006 aa19.42■□□□□ 0.7
SMG6-214ENST00000573827 B4GALT3O60512 393 aa19.42■□□□□ 0.7
SMG6-214ENST00000573827 DGAT1O75907 488 aa19.42■□□□□ 0.7
SMG6-214ENST00000573827 OR52Z1P0C646 297 aa19.42■□□□□ 0.7
SMG6-214ENST00000573827 TRAPPC10P48553 1259 aa19.42■□□□□ 0.7
SMG6-214ENST00000573827 PTENP60484 403 aa19.42■□□□□ 0.7
SMG6-214ENST00000573827 POU5F1BQ06416 359 aa19.42■□□□□ 0.7
SMG6-214ENST00000573827 NBR1Q14596 966 aa19.42■□□□□ 0.7
SMG6-214ENST00000573827 PUS10Q3MIT2 529 aaKnown RBP19.42■□□□□ 0.7
SMG6-214ENST00000573827 TWF2Q6IBS0 349 aaKnown RBP19.42■□□□□ 0.7
SMG6-214ENST00000573827 SLC39A11Q8N1S5 342 aa19.42■□□□□ 0.7
SMG6-214ENST00000573827 RNF149Q8NC42 400 aa19.42■□□□□ 0.7
SMG6-214ENST00000573827 VN1R2Q8NFZ6 395 aa19.42■□□□□ 0.7
SMG6-214ENST00000573827 MRPS27Q92552 414 aaKnown RBP19.42■□□□□ 0.7
SMG6-214ENST00000573827 POLR3CQ9BUI4 534 aaPredicted RBP19.42■□□□□ 0.7
SMG6-214ENST00000573827 TLR9Q9NR96 1032 aa19.42■□□□□ 0.7
SMG6-214ENST00000573827 OFD1O75665 1012 aa19.41■□□□□ 0.7
SMG6-214ENST00000573827 GLRA2P23416 452 aa19.41■□□□□ 0.7
SMG6-214ENST00000573827 CAPSQ13938 189 aa19.41■□□□□ 0.7
SMG6-214ENST00000573827 KCNC3Q14003 757 aa19.41■□□□□ 0.7
SMG6-214ENST00000573827 TTC38Q5R3I4 469 aa19.41■□□□□ 0.7
SMG6-214ENST00000573827 SPOUT1Q5T280 376 aaKnown RBP19.41■□□□□ 0.7
SMG6-214ENST00000573827 AGMOQ6ZNB7 445 aa19.41■□□□□ 0.7
SMG6-214ENST00000573827 TMEM173Q86WV6 379 aaPredicted RBP19.41■□□□□ 0.7
SMG6-214ENST00000573827 THNSL1Q8IYQ7 743 aa19.41■□□□□ 0.7
SMG6-214ENST00000573827 ZNF558Q96NG5 402 aa19.41■□□□□ 0.7
SMG6-214ENST00000573827 IGFLR1Q9H665 355 aa19.41■□□□□ 0.7
SMG6-214ENST00000573827 TUFT1Q9NNX1 390 aa19.41■□□□□ 0.7
SMG6-214ENST00000573827 PCDHB2Q9Y5E7 798 aa19.41■□□□□ 0.7
SMG6-214ENST00000573827 TSPAN1O60635 241 aa19.4■□□□□ 0.7
SMG6-214ENST00000573827 EYA4O95677 639 aa19.4■□□□□ 0.7
SMG6-214ENST00000573827 TECP42680 631 aa19.4■□□□□ 0.7
SMG6-214ENST00000573827 NRIP1P48552 1158 aa19.4■□□□□ 0.7
SMG6-214ENST00000573827 RAB27AP51159 221 aa19.4■□□□□ 0.7
SMG6-214ENST00000573827 AFF1P51825 1210 aaKnown RBP19.4■□□□□ 0.7
SMG6-214ENST00000573827 RBM10P98175 930 aaKnown RBP19.4■□□□□ 0.7
SMG6-214ENST00000573827 ZP2Q05996 745 aa19.4■□□□□ 0.7
SMG6-214ENST00000573827 MBTD1Q05BQ5 628 aa19.4■□□□□ 0.7
SMG6-214ENST00000573827 MXD4Q14582 209 aaPredicted RBP19.4■□□□□ 0.7
SMG6-214ENST00000573827 ABI1Q8IZP0 508 aa19.4■□□□□ 0.7
SMG6-214ENST00000573827 RSPH1Q8WYR4 309 aa19.4■□□□□ 0.7
SMG6-214ENST00000573827 TMX3Q96JJ7 454 aa19.4■□□□□ 0.7
SMG6-214ENST00000573827 NFKBIZQ9BYH8 718 aa19.4■□□□□ 0.7
SMG6-214ENST00000573827 TBC1D13Q9NVG8 400 aa19.4■□□□□ 0.7
SMG6-214ENST00000573827 DBR1Q9UK59 544 aaKnown RBP19.4■□□□□ 0.7
SMG6-214ENST00000573827 C19orf67A6NJJ6 358 aa19.39■□□□□ 0.69
SMG6-214ENST00000573827 MBTPS2O43462 519 aa19.39■□□□□ 0.69
SMG6-214ENST00000573827 SKIP12755 728 aa19.39■□□□□ 0.69
SMG6-214ENST00000573827 RPA1P27694 616 aa19.39■□□□□ 0.69
SMG6-214ENST00000573827 PPM1AP35813 382 aa19.39■□□□□ 0.69
SMG6-214ENST00000573827 FXR2P51116 673 aaKnown RBP eCLIP19.39■□□□□ 0.69
SMG6-214ENST00000573827 SMAD2Q15796 467 aaKnown RBP19.39■□□□□ 0.69
SMG6-214ENST00000573827 ECM1Q16610 540 aa19.39■□□□□ 0.69
SMG6-214ENST00000573827 DUSP6Q16828 381 aa19.39■□□□□ 0.69
SMG6-214ENST00000573827 LONRF3Q496Y0 759 aa19.39■□□□□ 0.69
SMG6-214ENST00000573827 POTEGQ6S5H5 508 aa19.39■□□□□ 0.69
SMG6-214ENST00000573827 FAM184AQ8NB25 1140 aa19.39■□□□□ 0.69
SMG6-214ENST00000573827 SMG8Q8ND04 991 aaKnown RBP19.39■□□□□ 0.69
SMG6-214ENST00000573827 BCL7CQ8WUZ0 217 aaPredicted RBP19.39■□□□□ 0.69
SMG6-214ENST00000573827 TBC1D32Q96NH3 1257 aa19.39■□□□□ 0.69
SMG6-214ENST00000573827 MRPL9Q9BYD2 267 aaKnown RBP19.39■□□□□ 0.69
SMG6-214ENST00000573827 EPHX3Q9H6B9 360 aa19.39■□□□□ 0.69
SMG6-214ENST00000573827 GPRC5CQ9NQ84 441 aa19.39■□□□□ 0.69
SMG6-214ENST00000573827 SPG21Q9NZD8 308 aa19.39■□□□□ 0.69
SMG6-214ENST00000573827 HIDE1A8MVS5 230 aa19.38■□□□□ 0.69
SMG6-214ENST00000573827 PER2O15055 1255 aa19.38■□□□□ 0.69
SMG6-214ENST00000573827 INPPL1O15357 1258 aa19.38■□□□□ 0.69
SMG6-214ENST00000573827 BCAR1P56945 870 aa19.38■□□□□ 0.69
SMG6-214ENST00000573827 COASYQ13057 564 aa19.38■□□□□ 0.69
SMG6-214ENST00000573827 SMAD4Q13485 552 aaKnown RBP19.38■□□□□ 0.69
SMG6-214ENST00000573827 PCBP1Q15365 356 aaKnown RBP eCLIP19.38■□□□□ 0.69
SMG6-214ENST00000573827 CLUL1Q15846 466 aa19.38■□□□□ 0.69
SMG6-214ENST00000573827 IL17AQ16552 155 aa19.38■□□□□ 0.69
SMG6-214ENST00000573827 NOMO2Q5JPE7 1267 aa19.38■□□□□ 0.69
SMG6-214ENST00000573827 PDE12Q6L8Q7 609 aaKnown RBP19.38■□□□□ 0.69
SMG6-214ENST00000573827 EP400NLQ6ZTU2 488 aa19.38■□□□□ 0.69
SMG6-214ENST00000573827 RBM23Q86U06 439 aaKnown RBP19.38■□□□□ 0.69
SMG6-214ENST00000573827 GJD3Q8N144 294 aa19.38■□□□□ 0.69
SMG6-214ENST00000573827 VN1R3Q9BXE9 311 aa19.38■□□□□ 0.69
SMG6-214ENST00000573827 NRDE2Q9H7Z3 1164 aa19.38■□□□□ 0.69
SMG6-214ENST00000573827 TLE6Q9H808 572 aa19.38■□□□□ 0.69
SMG6-214ENST00000573827 PCDHB6Q9Y5E3 794 aa19.38■□□□□ 0.69
SMG6-214ENST00000573827 NCLP19338 710 aaKnown RBP19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms