RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 FAM105AQ9NUU6 356 aa19.31■□□□□ 0.68
SMG6-212ENST00000573153 CLDND1Q9NY35 253 aa19.31■□□□□ 0.68
SMG6-212ENST00000573153 CLEC1BQ9P126 229 aa19.31■□□□□ 0.68
SMG6-212ENST00000573153 PIN4Q9Y237 131 aaKnown RBP19.31■□□□□ 0.68
SMG6-212ENST00000573153 HOXA2O43364 376 aa19.3■□□□□ 0.68
SMG6-212ENST00000573153 OR52Z1P0C646 297 aa19.3■□□□□ 0.68
SMG6-212ENST00000573153 LAG3P18627 525 aa19.3■□□□□ 0.68
SMG6-212ENST00000573153 ATP2B1P20020 1258 aa19.3■□□□□ 0.68
SMG6-212ENST00000573153 GLRA2P23416 452 aa19.3■□□□□ 0.68
SMG6-212ENST00000573153 TRAPPC10P48553 1259 aa19.3■□□□□ 0.68
SMG6-212ENST00000573153 AFF1P51825 1210 aaKnown RBP19.3■□□□□ 0.68
SMG6-212ENST00000573153 PTENP60484 403 aa19.3■□□□□ 0.68
SMG6-212ENST00000573153 ECM1Q16610 540 aa19.3■□□□□ 0.68
SMG6-212ENST00000573153 PTCRAQ6ISU1 281 aaPredicted RBP19.3■□□□□ 0.68
SMG6-212ENST00000573153 KCNT2Q6UVM3 1135 aa19.3■□□□□ 0.68
SMG6-212ENST00000573153 AGMOQ6ZNB7 445 aa19.3■□□□□ 0.68
SMG6-212ENST00000573153 OTUD6AQ7L8S5 288 aa19.3■□□□□ 0.68
SMG6-212ENST00000573153 SLC39A11Q8N1S5 342 aa19.3■□□□□ 0.68
SMG6-212ENST00000573153 FAM184AQ8NB25 1140 aa19.3■□□□□ 0.68
SMG6-212ENST00000573153 MTRQ99707 1265 aa19.3■□□□□ 0.68
SMG6-212ENST00000573153 INO80BQ9C086 356 aaPredicted RBP19.3■□□□□ 0.68
SMG6-212ENST00000573153 DACT1Q9NYF0 836 aa19.3■□□□□ 0.68
SMG6-212ENST00000573153 C5orf42Q9H799 3197 aa19.3■□□□□ 0.68
SMG6-212ENST00000573153 SRGAP2CP0DJJ0 459 aa19.29■□□□□ 0.68
SMG6-212ENST00000573153 RBM10P98175 930 aaKnown RBP19.29■□□□□ 0.68
SMG6-212ENST00000573153 TTC38Q5R3I4 469 aa19.29■□□□□ 0.68
SMG6-212ENST00000573153 CATSPER4Q7RTX7 472 aa19.29■□□□□ 0.68
SMG6-212ENST00000573153 MRPL10Q7Z7H8 261 aaKnown RBP19.29■□□□□ 0.68
SMG6-212ENST00000573153 EFHBQ8N7U6 833 aa19.29■□□□□ 0.68
SMG6-212ENST00000573153 RNF149Q8NC42 400 aa19.29■□□□□ 0.68
SMG6-212ENST00000573153 BCL7CQ8WUZ0 217 aaPredicted RBP19.29■□□□□ 0.68
SMG6-212ENST00000573153 MRPS27Q92552 414 aaKnown RBP19.29■□□□□ 0.68
SMG6-212ENST00000573153 TMX3Q96JJ7 454 aa19.29■□□□□ 0.68
SMG6-212ENST00000573153 POLR3CQ9BUI4 534 aaPredicted RBP19.29■□□□□ 0.68
SMG6-212ENST00000573153 TUFT1Q9NNX1 390 aa19.29■□□□□ 0.68
SMG6-212ENST00000573153 LZTS1Q9Y250 596 aa19.29■□□□□ 0.68
SMG6-212ENST00000573153 PCDHB12Q9Y5F1 795 aa19.29■□□□□ 0.68
SMG6-212ENST00000573153 TSPAN1O60635 241 aa19.28■□□□□ 0.68
SMG6-212ENST00000573153 OFD1O75665 1012 aa19.28■□□□□ 0.68
SMG6-212ENST00000573153 DGAT1O75907 488 aa19.28■□□□□ 0.68
SMG6-212ENST00000573153 XRCC6P12956 609 aaKnown RBP eCLIP19.28■□□□□ 0.68
SMG6-212ENST00000573153 MBTD1Q05BQ5 628 aa19.28■□□□□ 0.68
SMG6-212ENST00000573153 POU5F1BQ06416 359 aa19.28■□□□□ 0.68
SMG6-212ENST00000573153 IL17AQ16552 155 aa19.28■□□□□ 0.68
SMG6-212ENST00000573153 POTEGQ6S5H5 508 aa19.28■□□□□ 0.68
SMG6-212ENST00000573153 RNF169Q8NCN4 708 aa19.28■□□□□ 0.68
SMG6-212ENST00000573153 SMG8Q8ND04 991 aaKnown RBP19.28■□□□□ 0.68
SMG6-212ENST00000573153 TCP11Q8WWU5 503 aa19.28■□□□□ 0.68
SMG6-212ENST00000573153 GPRC5CQ9NQ84 441 aa19.28■□□□□ 0.68
SMG6-212ENST00000573153 TLR9Q9NR96 1032 aa19.28■□□□□ 0.68
SMG6-212ENST00000573153 KIF3AQ9Y496 699 aa19.28■□□□□ 0.68
SMG6-212ENST00000573153 PCDHB6Q9Y5E3 794 aa19.28■□□□□ 0.68
SMG6-212ENST00000573153 ASAP2O43150 1006 aa19.27■□□□□ 0.68
SMG6-212ENST00000573153 MBTPS2O43462 519 aa19.27■□□□□ 0.68
SMG6-212ENST00000573153 NCK2O43639 380 aa19.27■□□□□ 0.68
SMG6-212ENST00000573153 TECP42680 631 aa19.27■□□□□ 0.68
SMG6-212ENST00000573153 NRIP1P48552 1158 aa19.27■□□□□ 0.68
SMG6-212ENST00000573153 FXR2P51116 673 aaKnown RBP eCLIP19.27■□□□□ 0.68
SMG6-212ENST00000573153 CSPP1Q1MSJ5 1256 aa19.27■□□□□ 0.68
SMG6-212ENST00000573153 LONRF3Q496Y0 759 aa19.27■□□□□ 0.68
SMG6-212ENST00000573153 TWF2Q6IBS0 349 aaKnown RBP19.27■□□□□ 0.68
SMG6-212ENST00000573153 THNSL1Q8IYQ7 743 aa19.27■□□□□ 0.68
SMG6-212ENST00000573153 BSNDQ8WZ55 320 aa19.27■□□□□ 0.68
SMG6-212ENST00000573153 VN1R3Q9BXE9 311 aa19.27■□□□□ 0.68
SMG6-212ENST00000573153 NFKBIZQ9BYH8 718 aa19.27■□□□□ 0.68
SMG6-212ENST00000573153 NRDE2Q9H7Z3 1164 aa19.27■□□□□ 0.68
SMG6-212ENST00000573153 C11orf16Q9NQ32 467 aa19.27■□□□□ 0.68
SMG6-212ENST00000573153 AAASQ9NRG9 546 aa19.27■□□□□ 0.68
SMG6-212ENST00000573153 TBC1D13Q9NVG8 400 aa19.27■□□□□ 0.68
SMG6-212ENST00000573153 DBR1Q9UK59 544 aaKnown RBP19.27■□□□□ 0.68
SMG6-212ENST00000573153 PCDHB2Q9Y5E7 798 aa19.27■□□□□ 0.68
SMG6-212ENST00000573153 C19orf67A6NJJ6 358 aa19.26■□□□□ 0.67
SMG6-212ENST00000573153 HIDE1A8MVS5 230 aa19.26■□□□□ 0.67
SMG6-212ENST00000573153 INPPL1O15357 1258 aa19.26■□□□□ 0.67
SMG6-212ENST00000573153 EYA4O95677 639 aa19.26■□□□□ 0.67
SMG6-212ENST00000573153 RPA1P27694 616 aa19.26■□□□□ 0.67
SMG6-212ENST00000573153 RAB27AP51159 221 aa19.26■□□□□ 0.67
SMG6-212ENST00000573153 ZP2Q05996 745 aa19.26■□□□□ 0.67
SMG6-212ENST00000573153 DUSP6Q16828 381 aa19.26■□□□□ 0.67
SMG6-212ENST00000573153 IGSF22Q8N9C0 903 aa19.26■□□□□ 0.67
SMG6-212ENST00000573153 ZNF558Q96NG5 402 aa19.26■□□□□ 0.67
SMG6-212ENST00000573153 EIF2AQ9BY44 585 aaKnown RBP19.26■□□□□ 0.67
SMG6-212ENST00000573153 IGFLR1Q9H665 355 aa19.26■□□□□ 0.67
SMG6-212ENST00000573153 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.26■□□□□ 0.67
SMG6-212ENST00000573153 PER2O15055 1255 aa19.25■□□□□ 0.67
SMG6-212ENST00000573153 B4GALT5O43286 388 aa19.25■□□□□ 0.67
SMG6-212ENST00000573153 USO1O60763 962 aaKnown RBP19.25■□□□□ 0.67
SMG6-212ENST00000573153 EDN1P05305 212 aa19.25■□□□□ 0.67
SMG6-212ENST00000573153 BCAR1P56945 870 aa19.25■□□□□ 0.67
SMG6-212ENST00000573153 MXD4Q14582 209 aaPredicted RBP19.25■□□□□ 0.67
SMG6-212ENST00000573153 SMAD2Q15796 467 aaKnown RBP19.25■□□□□ 0.67
SMG6-212ENST00000573153 CLUL1Q15846 466 aa19.25■□□□□ 0.67
SMG6-212ENST00000573153 PUS10Q3MIT2 529 aaKnown RBP19.25■□□□□ 0.67
SMG6-212ENST00000573153 SPOUT1Q5T280 376 aaKnown RBP19.25■□□□□ 0.67
SMG6-212ENST00000573153 CDCA2Q69YH5 1023 aaPredicted RBP19.25■□□□□ 0.67
SMG6-212ENST00000573153 RBM23Q86U06 439 aaKnown RBP19.25■□□□□ 0.67
SMG6-212ENST00000573153 ZNF280BQ86YH2 543 aa19.25■□□□□ 0.67
SMG6-212ENST00000573153 SMRP1Q8NCR6 262 aa19.25■□□□□ 0.67
SMG6-212ENST00000573153 MRPL9Q9BYD2 267 aaKnown RBP19.25■□□□□ 0.67
SMG6-212ENST00000573153 POLR3FQ9H1D9 316 aaPredicted RBP19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms