RNA–Protein interactions for RNA: ENST00000572949.5

USP6-204, Transcript of ubiquitin specific peptidase 6, humanhuman

TSL 2

Gene USP6, Length 7,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-204ENST00000572949 TTC39CQ8N584 583 aa10.06□□□□□ -0.8
USP6-204ENST00000572949 TMEM35BQ8NCS4 154 aa10.06□□□□□ -0.8
USP6-204ENST00000572949 ASAP3Q8TDY4 903 aa10.06□□□□□ -0.8
USP6-204ENST00000572949 RNF26Q9BY78 433 aaPredicted RBP10.06□□□□□ -0.8
USP6-204ENST00000572949 KCNA2P16389 499 aa10.06□□□□□ -0.8
USP6-204ENST00000572949 AMPD2Q01433 879 aa10.06□□□□□ -0.8
USP6-204ENST00000572949 MAP3K10Q02779 954 aa10.06□□□□□ -0.8
USP6-204ENST00000572949 TWF1Q12792 350 aa10.06□□□□□ -0.8
USP6-204ENST00000572949 E2F5Q15329 346 aa10.06□□□□□ -0.8
USP6-204ENST00000572949 ELF2Q15723 593 aa10.06□□□□□ -0.8
USP6-204ENST00000572949 ZNF827Q17R98 1081 aa10.06□□□□□ -0.8
USP6-204ENST00000572949 CALB1P05937 261 aa10.06□□□□□ -0.8
USP6-204ENST00000572949 COPB1P53618 953 aaKnown RBP10.06□□□□□ -0.8
USP6-204ENST00000572949 DEUP1Q05D60 604 aa10.06□□□□□ -0.8
USP6-204ENST00000572949 MAN2A1Q16706 1144 aa10.06□□□□□ -0.8
USP6-204ENST00000572949 CYP4A22Q5TCH4 519 aa10.06□□□□□ -0.8
USP6-204ENST00000572949 DDIASQ8IXT1 998 aa10.06□□□□□ -0.8
USP6-204ENST00000572949 FAM213AQ9BRX8 229 aa10.06□□□□□ -0.8
USP6-204ENST00000572949 ADAM22Q9P0K1 906 aa10.06□□□□□ -0.8
USP6-204ENST00000572949 TARSL2A2RTX5 802 aaKnown RBP10.05□□□□□ -0.8
USP6-204ENST00000572949 E9PMD0 336 aa10.05□□□□□ -0.8
USP6-204ENST00000572949 TXNP10599 105 aaKnown RBP10.05□□□□□ -0.8
USP6-204ENST00000572949 SLC9A1P19634 815 aa10.05□□□□□ -0.8
USP6-204ENST00000572949 TRPC1P48995 793 aa10.05□□□□□ -0.8
USP6-204ENST00000572949 TMEM270Q6UE05 265 aa10.05□□□□□ -0.8
USP6-204ENST00000572949 P2RX5Q93086 422 aa10.05□□□□□ -0.8
USP6-204ENST00000572949 DNAJC5BQ9UF47 199 aa10.05□□□□□ -0.8
USP6-204ENST00000572949 PALLDQ8WX93 1383 aa10.05□□□□□ -0.8
USP6-204ENST00000572949 CTTNBP2Q8WZ74 1663 aa10.05□□□□□ -0.8
USP6-204ENST00000572949 ZBTB7BO15156 539 aaPredicted RBP10.05□□□□□ -0.8
USP6-204ENST00000572949 KRT7P08729 469 aa10.05□□□□□ -0.8
USP6-204ENST00000572949 CHRNA3P32297 505 aa10.05□□□□□ -0.8
USP6-204ENST00000572949 STAT3P40763 770 aa10.05□□□□□ -0.8
USP6-204ENST00000572949 NCKAP1LP55160 1127 aa10.05□□□□□ -0.8
USP6-204ENST00000572949 SKA1Q96BD8 255 aa10.05□□□□□ -0.8
USP6-204ENST00000572949 FOXP1Q9H334 677 aaPredicted RBP10.05□□□□□ -0.8
USP6-204ENST00000572949 DTNAQ9Y4J8 743 aa10.05□□□□□ -0.8
USP6-204ENST00000572949 TTLL13PA6NNM8 815 aa10.05□□□□□ -0.8
USP6-204ENST00000572949 TLR2O60603 784 aa10.05□□□□□ -0.8
USP6-204ENST00000572949 KRT76Q01546 638 aa10.05□□□□□ -0.8
USP6-204ENST00000572949 RASSF3Q86WH2 238 aa10.05□□□□□ -0.8
USP6-204ENST00000572949 ENGASEQ8NFI3 743 aa10.05□□□□□ -0.8
USP6-204ENST00000572949 RPAP3Q9H6T3 665 aaPredicted RBP10.05□□□□□ -0.8
USP6-204ENST00000572949 DNAJC17Q9NVM6 304 aaKnown RBP10.05□□□□□ -0.8
USP6-204ENST00000572949 PCDHA6Q9UN73 950 aa10.05□□□□□ -0.8
USP6-204ENST00000572949 PCDHA8Q9Y5H6 950 aa10.05□□□□□ -0.8
USP6-204ENST00000572949 TRAPPC8Q9Y2L5 1435 aa10.05□□□□□ -0.8
USP6-204ENST00000572949 ABCC4O15439 1325 aa10.05□□□□□ -0.8
USP6-204ENST00000572949 ORC4O43929 436 aa10.05□□□□□ -0.8
USP6-204ENST00000572949 SYNCRIPO60506 623 aaKnown RBP10.05□□□□□ -0.8
USP6-204ENST00000572949 KRT37O76014 449 aa10.05□□□□□ -0.8
USP6-204ENST00000572949 HMOX2P30519 316 aa10.05□□□□□ -0.8
USP6-204ENST00000572949 PRELPP51888 382 aa10.05□□□□□ -0.8
USP6-204ENST00000572949 TBC1D9BQ66K14 1250 aa10.05□□□□□ -0.8
USP6-204ENST00000572949 ERAP2Q6P179 960 aa10.05□□□□□ -0.8
USP6-204ENST00000572949 C10orf53Q8N6V4 93 aa10.05□□□□□ -0.8
USP6-204ENST00000572949 TMEM169Q96HH4 297 aa10.05□□□□□ -0.8
USP6-204ENST00000572949 DDX56Q9NY93 547 aaKnown RBP10.05□□□□□ -0.8
USP6-204ENST00000572949 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.05□□□□□ -0.8
USP6-204ENST00000572949 GABBR1Q9UBS5 961 aa10.05□□□□□ -0.8
USP6-204ENST00000572949 SPACA6W5XKT8 324 aa10.05□□□□□ -0.8
USP6-204ENST00000572949 RPS6KA5O75582 802 aa10.05□□□□□ -0.8
USP6-204ENST00000572949 IGFBP4P22692 258 aa10.05□□□□□ -0.8
USP6-204ENST00000572949 KDELC2Q7Z4H8 507 aa10.05□□□□□ -0.8
USP6-204ENST00000572949 KRT78Q8N1N4 520 aa10.05□□□□□ -0.8
USP6-204ENST00000572949 GLT1D1Q96MS3 346 aa10.05□□□□□ -0.8
USP6-204ENST00000572949 TUBB6Q9BUF5 446 aa10.05□□□□□ -0.8
USP6-204ENST00000572949 VPS11Q9H270 941 aa10.05□□□□□ -0.8
USP6-204ENST00000572949 CIAO1O76071 339 aa10.04□□□□□ -0.8
USP6-204ENST00000572949 TBXAS1P24557 533 aaPredicted RBP10.04□□□□□ -0.8
USP6-204ENST00000572949 BRD2P25440 801 aaKnown RBP10.04□□□□□ -0.8
USP6-204ENST00000572949 SFNP31947 248 aa10.04□□□□□ -0.8
USP6-204ENST00000572949 HAUS4Q9H6D7 363 aa10.04□□□□□ -0.8
USP6-204ENST00000572949 DMAP1Q9NPF5 467 aaPredicted RBP10.04□□□□□ -0.8
USP6-204ENST00000572949 PGRMC1O00264 195 aaKnown RBP10.04□□□□□ -0.8
USP6-204ENST00000572949 MYBP10242 640 aa10.04□□□□□ -0.8
USP6-204ENST00000572949 EFTUD2Q15029 972 aaKnown RBP eCLIP10.04□□□□□ -0.8
USP6-204ENST00000572949 OTUD7AQ8TE49 926 aaPredicted RBP10.04□□□□□ -0.8
USP6-204ENST00000572949 SCFD1Q8WVM8 642 aa10.04□□□□□ -0.8
USP6-204ENST00000572949 NFKBIZQ9BYH8 718 aa10.04□□□□□ -0.8
USP6-204ENST00000572949 BHMT2Q9H2M3 363 aa10.04□□□□□ -0.8
USP6-204ENST00000572949 PSD3Q9NYI0 1048 aa10.04□□□□□ -0.8
USP6-204ENST00000572949 H2AFY2Q9P0M6 372 aaPredicted RBP10.04□□□□□ -0.8
USP6-204ENST00000572949 LCMT1Q9UIC8 334 aa10.04□□□□□ -0.8
USP6-204ENST00000572949 FAM32AQ9Y421 112 aaKnown RBP10.04□□□□□ -0.8
USP6-204ENST00000572949 SUPT3HO75486 399 aa10.04□□□□□ -0.8
USP6-204ENST00000572949 STAG3L1P0CL83 205 aa10.04□□□□□ -0.8
USP6-204ENST00000572949 HARS2P49590 506 aaKnown RBP10.04□□□□□ -0.8
USP6-204ENST00000572949 NR5A1Q13285 461 aa10.04□□□□□ -0.8
USP6-204ENST00000572949 TFDP2Q14188 446 aa10.04□□□□□ -0.8
USP6-204ENST00000572949 CCNYL1Q8N7R7 359 aa10.04□□□□□ -0.8
USP6-204ENST00000572949 EVA1BQ9NVM1 165 aa10.04□□□□□ -0.8
USP6-204ENST00000572949 CFAP74Q9C0B2 1584 aa10.04□□□□□ -0.8
USP6-204ENST00000572949 CHL1O00533 1208 aa10.04□□□□□ -0.8
USP6-204ENST00000572949 ERVK-10P10266 1014 aa10.04□□□□□ -0.8
USP6-204ENST00000572949 ME3Q16798 604 aa10.04□□□□□ -0.8
USP6-204ENST00000572949 RABGGTAQ92696 567 aa10.04□□□□□ -0.8
USP6-204ENST00000572949 ANAPC7Q9UJX3 599 aa10.04□□□□□ -0.8
USP6-204ENST00000572949 UGGT2Q9NYU1 1516 aa10.04□□□□□ -0.8
USP6-204ENST00000572949 DYNC1LI2O43237 492 aaPredicted RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms