RNA–Protein interactions for RNA: ENST00000570727.5

NDE1-203, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 4

Gene NDE1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-203ENST00000570727 JPH2Q9BR39 696 aaPredicted RBP16.56■□□□□ 0.24
NDE1-203ENST00000570727 DHX33Q9H6R0 707 aaKnown RBP16.56■□□□□ 0.24
NDE1-203ENST00000570727 FAM105AQ9NUU6 356 aa16.56■□□□□ 0.24
NDE1-203ENST00000570727 CDH22Q9UJ99 828 aa16.56■□□□□ 0.24
NDE1-203ENST00000570727 PIN4Q9Y237 131 aaKnown RBP16.56■□□□□ 0.24
NDE1-203ENST00000570727 HCFC2Q9Y5Z7 792 aa16.56■□□□□ 0.24
NDE1-203ENST00000570727 TBX3O15119 743 aa16.55■□□□□ 0.24
NDE1-203ENST00000570727 CCNT1O60563 726 aaKnown RBP16.55■□□□□ 0.24
NDE1-203ENST00000570727 CDKL5O76039 1030 aa16.55■□□□□ 0.24
NDE1-203ENST00000570727 GALTP07902 379 aa16.55■□□□□ 0.24
NDE1-203ENST00000570727 SKIP12755 728 aa16.55■□□□□ 0.24
NDE1-203ENST00000570727 GCFC2P16383 781 aaKnown RBP16.55■□□□□ 0.24
NDE1-203ENST00000570727 EPHA7Q15375 998 aa16.55■□□□□ 0.24
NDE1-203ENST00000570727 NOMO2Q5JPE7 1267 aa16.55■□□□□ 0.24
NDE1-203ENST00000570727 PIK3AP1Q6ZUJ8 805 aa16.55■□□□□ 0.24
NDE1-203ENST00000570727 CATSPER4Q7RTX7 472 aa16.55■□□□□ 0.24
NDE1-203ENST00000570727 VPS52Q8N1B4 723 aa16.55■□□□□ 0.24
NDE1-203ENST00000570727 BCL7CQ8WUZ0 217 aaPredicted RBP16.55■□□□□ 0.24
NDE1-203ENST00000570727 PRPF31Q8WWY3 499 aaKnown RBP16.55■□□□□ 0.24
NDE1-203ENST00000570727 TMEM143Q96AN5 459 aa16.55■□□□□ 0.24
NDE1-203ENST00000570727 PBXIP1Q96AQ6 731 aa16.55■□□□□ 0.24
NDE1-203ENST00000570727 CEP170P1Q96L14 293 aa16.55■□□□□ 0.24
NDE1-203ENST00000570727 MINDY3Q9H8M7 445 aa16.55■□□□□ 0.24
NDE1-203ENST00000570727 TBC1D13Q9NVG8 400 aa16.55■□□□□ 0.24
NDE1-203ENST00000570727 RGL1Q9NZL6 768 aa16.55■□□□□ 0.24
NDE1-203ENST00000570727 COL4A3BPQ9Y5P4 624 aa16.55■□□□□ 0.24
NDE1-203ENST00000570727 ZBTB39O15060 712 aa16.54■□□□□ 0.24
NDE1-203ENST00000570727 DKC1O60832 514 aaKnown RBP eCLIP16.54■□□□□ 0.24
NDE1-203ENST00000570727 ZC3H11AO75152 810 aaKnown RBP eCLIP16.54■□□□□ 0.24
NDE1-203ENST00000570727 FDPSP14324 419 aaKnown RBP16.54■□□□□ 0.24
NDE1-203ENST00000570727 HOXA11P31270 313 aaPredicted RBP16.54■□□□□ 0.24
NDE1-203ENST00000570727 SPIRE1Q08AE8 756 aa16.54■□□□□ 0.24
NDE1-203ENST00000570727 IER5LQ5T953 404 aa16.54■□□□□ 0.24
NDE1-203ENST00000570727 GLB1LQ6UWU2 654 aa16.54■□□□□ 0.24
NDE1-203ENST00000570727 AGMOQ6ZNB7 445 aa16.54■□□□□ 0.24
NDE1-203ENST00000570727 MRPL10Q7Z7H8 261 aaKnown RBP16.54■□□□□ 0.24
NDE1-203ENST00000570727 DDX53Q86TM3 631 aaKnown RBP16.54■□□□□ 0.24
NDE1-203ENST00000570727 ZNF280BQ86YH2 543 aa16.54■□□□□ 0.24
NDE1-203ENST00000570727 C4orf19Q8IY42 314 aa16.54■□□□□ 0.24
NDE1-203ENST00000570727 AUTS2Q8WXX7 1259 aa16.54■□□□□ 0.24
NDE1-203ENST00000570727 RSPH1Q8WYR4 309 aa16.54■□□□□ 0.24
NDE1-203ENST00000570727 CASP10Q92851 521 aa16.54■□□□□ 0.24
NDE1-203ENST00000570727 TMEM169Q96HH4 297 aa16.54■□□□□ 0.24
NDE1-203ENST00000570727 IGSF21Q96ID5 467 aa16.54■□□□□ 0.24
NDE1-203ENST00000570727 ZBP1Q9H171 429 aa16.54■□□□□ 0.24
NDE1-203ENST00000570727 AGPAT5Q9NUQ2 364 aa16.54■□□□□ 0.24
NDE1-203ENST00000570727 DNAJB4Q9UDY4 337 aa16.54■□□□□ 0.24
NDE1-203ENST00000570727 PCDHB2Q9Y5E7 798 aa16.54■□□□□ 0.24
NDE1-203ENST00000570727 ZDBF2Q9HCK1 2354 aa16.53■□□□□ 0.24
NDE1-203ENST00000570727 FAM205CA6NFA0 338 aa16.53■□□□□ 0.24
NDE1-203ENST00000570727 B4GALT3O60512 393 aa16.53■□□□□ 0.24
NDE1-203ENST00000570727 SRGAP2CP0DJJ0 459 aa16.53■□□□□ 0.24
NDE1-203ENST00000570727 CTSAP10619 480 aa16.53■□□□□ 0.24
NDE1-203ENST00000570727 XBP1P17861 261 aa16.53■□□□□ 0.24
NDE1-203ENST00000570727 RAB27AP51159 221 aa16.53■□□□□ 0.24
NDE1-203ENST00000570727 AFF1P51825 1210 aaKnown RBP16.53■□□□□ 0.24
NDE1-203ENST00000570727 POLGP54098 1239 aaPredicted RBP16.53■□□□□ 0.24
NDE1-203ENST00000570727 LAMTOR4Q0VGL1 99 aa16.53■□□□□ 0.24
NDE1-203ENST00000570727 TPRNQ4KMQ1 711 aa16.53■□□□□ 0.24
NDE1-203ENST00000570727 UBXN11Q5T124 520 aa16.53■□□□□ 0.24
NDE1-203ENST00000570727 SRGAP1Q7Z6B7 1085 aa16.53■□□□□ 0.24
NDE1-203ENST00000570727 POTEDQ86YR6 584 aa16.53■□□□□ 0.24
NDE1-203ENST00000570727 SLC7A3Q8WY07 619 aa16.53■□□□□ 0.24
NDE1-203ENST00000570727 TNFRSF25Q93038 417 aa16.53■□□□□ 0.24
NDE1-203ENST00000570727 ASIC4Q96FT7 647 aa16.53■□□□□ 0.24
NDE1-203ENST00000570727 DYDC2Q96IM9 177 aa16.53■□□□□ 0.24
NDE1-203ENST00000570727 LXNQ9BS40 222 aa16.53■□□□□ 0.24
NDE1-203ENST00000570727 VN1R3Q9BXE9 311 aa16.53■□□□□ 0.24
NDE1-203ENST00000570727 ADAM7Q9H2U9 754 aa16.53■□□□□ 0.24
NDE1-203ENST00000570727 ORC3Q9UBD5 711 aaPredicted RBP16.53■□□□□ 0.24
NDE1-203ENST00000570727 INPP5FQ9Y2H2 1132 aa16.53■□□□□ 0.24
NDE1-203ENST00000570727 PPME1Q9Y570 386 aa16.53■□□□□ 0.24
NDE1-203ENST00000570727 IRAK3Q9Y616 596 aa16.53■□□□□ 0.24
NDE1-203ENST00000570727 DDHD2O94830 711 aa16.52■□□□□ 0.24
NDE1-203ENST00000570727 SP100P23497 879 aaPredicted RBP16.52■□□□□ 0.24
NDE1-203ENST00000570727 YWHABP31946 246 aaKnown RBP16.52■□□□□ 0.24
NDE1-203ENST00000570727 RFC5P40937 340 aa16.52■□□□□ 0.24
NDE1-203ENST00000570727 SLC11A1P49279 550 aa16.52■□□□□ 0.24
NDE1-203ENST00000570727 AK2P54819 239 aa16.52■□□□□ 0.24
NDE1-203ENST00000570727 SIGLEC14Q08ET2 396 aa16.52■□□□□ 0.24
NDE1-203ENST00000570727 NR5A1Q13285 461 aa16.52■□□□□ 0.24
NDE1-203ENST00000570727 CTTNQ14247 550 aaKnown RBP16.52■□□□□ 0.24
NDE1-203ENST00000570727 PTPN21Q16825 1174 aa16.52■□□□□ 0.24
NDE1-203ENST00000570727 NCAPH2Q6IBW4 605 aa16.52■□□□□ 0.24
NDE1-203ENST00000570727 KANK3Q6NY19 840 aa16.52■□□□□ 0.24
NDE1-203ENST00000570727 EXOC8Q8IYI6 725 aa16.52■□□□□ 0.24
NDE1-203ENST00000570727 SLC22A17Q8WUG5 538 aa16.52■□□□□ 0.24
NDE1-203ENST00000570727 PSPC1Q8WXF1 523 aaKnown RBP16.52■□□□□ 0.24
NDE1-203ENST00000570727 PGBD4Q96DM1 585 aa16.52■□□□□ 0.24
NDE1-203ENST00000570727 NAP1L4Q99733 375 aaKnown RBP16.52■□□□□ 0.24
NDE1-203ENST00000570727 POMKQ9H5K3 350 aa16.52■□□□□ 0.24
NDE1-203ENST00000570727 ARID2Q68CP9 1835 aa16.52■□□□□ 0.23
NDE1-203ENST00000570727 USP34Q70CQ2 3546 aa16.51■□□□□ 0.23
NDE1-203ENST00000570727 ASAP2O43150 1006 aa16.51■□□□□ 0.23
NDE1-203ENST00000570727 SLITRK3O94933 977 aa16.51■□□□□ 0.23
NDE1-203ENST00000570727 MRE11P49959 708 aa16.51■□□□□ 0.23
NDE1-203ENST00000570727 RNASELQ05823 741 aaKnown RBP16.51■□□□□ 0.23
NDE1-203ENST00000570727 ITIH3Q06033 890 aa16.51■□□□□ 0.23
NDE1-203ENST00000570727 BMS1Q14692 1282 aaKnown RBP16.51■□□□□ 0.23
NDE1-203ENST00000570727 XKR9Q5GH70 373 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms