RNA–Protein interactions for RNA: ENST00000570324.1

NPLOC4-204, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 414 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-204ENST00000570324 FAM86C2PA6NEL3 165 aa9.96□□□□□ -0.82
NPLOC4-204ENST00000570324 GPR37L1O60883 481 aa9.96□□□□□ -0.82
NPLOC4-204ENST00000570324 ZC3H11AO75152 810 aaKnown RBP eCLIP9.96□□□□□ -0.82
NPLOC4-204ENST00000570324 SLITRK3O94933 977 aa9.96□□□□□ -0.82
NPLOC4-204ENST00000570324 PBX3P40426 434 aa9.96□□□□□ -0.82
NPLOC4-204ENST00000570324 GUCY1B3Q02153 619 aa9.96□□□□□ -0.82
NPLOC4-204ENST00000570324 ZP2Q05996 745 aa9.96□□□□□ -0.82
NPLOC4-204ENST00000570324 LAMTOR4Q0VGL1 99 aa9.96□□□□□ -0.82
NPLOC4-204ENST00000570324 MXD4Q14582 209 aaPredicted RBP9.96□□□□□ -0.82
NPLOC4-204ENST00000570324 SMC1AQ14683 1233 aaKnown RBP9.96□□□□□ -0.82
NPLOC4-204ENST00000570324 EMC2Q15006 297 aa9.96□□□□□ -0.82
NPLOC4-204ENST00000570324 CLLU1OSQ5K130 101 aa9.96□□□□□ -0.82
NPLOC4-204ENST00000570324 LLGL2Q6P1M3 1020 aa9.96□□□□□ -0.82
NPLOC4-204ENST00000570324 LRRC55Q6ZSA7 311 aa9.96□□□□□ -0.82
NPLOC4-204ENST00000570324 CCDC83Q8IWF9 413 aa9.96□□□□□ -0.82
NPLOC4-204ENST00000570324 ZNF579Q8NAF0 562 aaKnown RBP9.96□□□□□ -0.82
NPLOC4-204ENST00000570324 RNF149Q8NC42 400 aa9.96□□□□□ -0.82
NPLOC4-204ENST00000570324 KHSRPQ92945 711 aaKnown RBP eCLIP9.96□□□□□ -0.82
NPLOC4-204ENST00000570324 LPPQ93052 612 aa9.96□□□□□ -0.82
NPLOC4-204ENST00000570324 C8orf76Q96K31 380 aa9.96□□□□□ -0.82
NPLOC4-204ENST00000570324 ZSCAN31Q96LW9 406 aaPredicted RBP9.96□□□□□ -0.82
NPLOC4-204ENST00000570324 FAM193BQ96PV7 902 aaPredicted RBP9.96□□□□□ -0.82
NPLOC4-204ENST00000570324 CEP89Q96ST8 783 aa9.96□□□□□ -0.82
NPLOC4-204ENST00000570324 GBP3Q9H0R5 595 aa9.96□□□□□ -0.82
NPLOC4-204ENST00000570324 DHX33Q9H6R0 707 aaKnown RBP9.96□□□□□ -0.82
NPLOC4-204ENST00000570324 FAM105AQ9NUU6 356 aa9.96□□□□□ -0.82
NPLOC4-204ENST00000570324 RNF19AQ9NV58 838 aa9.96□□□□□ -0.82
NPLOC4-204ENST00000570324 WRAP73Q9P2S5 460 aaPredicted RBP9.96□□□□□ -0.82
NPLOC4-204ENST00000570324 BARX2Q9UMQ3 279 aaPredicted RBP9.96□□□□□ -0.82
NPLOC4-204ENST00000570324 MYO7AQ13402 2215 aa9.96□□□□□ -0.82
NPLOC4-204ENST00000570324 BRWD1Q9NSI6 2320 aa9.96□□□□□ -0.82
NPLOC4-204ENST00000570324 A0A0C4DFX4 3053 aa9.96□□□□□ -0.82
NPLOC4-204ENST00000570324 PRUNE2Q8WUY3 3088 aa9.95□□□□□ -0.82
NPLOC4-204ENST00000570324 NT5C1B-RDH14C9J2C7 533 aa9.95□□□□□ -0.82
NPLOC4-204ENST00000570324 DCXO43602 365 aa9.95□□□□□ -0.82
NPLOC4-204ENST00000570324 SEC24BO95487 1268 aa9.95□□□□□ -0.82
NPLOC4-204ENST00000570324 MCM7P33993 719 aa9.95□□□□□ -0.82
NPLOC4-204ENST00000570324 BCAR1P56945 870 aa9.95□□□□□ -0.82
NPLOC4-204ENST00000570324 COASYQ13057 564 aa9.95□□□□□ -0.82
NPLOC4-204ENST00000570324 DUSP6Q16828 381 aa9.95□□□□□ -0.82
NPLOC4-204ENST00000570324 NOMO2Q5JPE7 1267 aa9.95□□□□□ -0.82
NPLOC4-204ENST00000570324 ZNF598Q86UK7 904 aaKnown RBP9.95□□□□□ -0.82
NPLOC4-204ENST00000570324 FERMT3Q86UX7 667 aa9.95□□□□□ -0.82
NPLOC4-204ENST00000570324 CNNM3Q8NE01 707 aa9.95□□□□□ -0.82
NPLOC4-204ENST00000570324 ERMNQ8TAM6 284 aa9.95□□□□□ -0.82
NPLOC4-204ENST00000570324 MSLNLQ96KJ4 702 aa9.95□□□□□ -0.82
NPLOC4-204ENST00000570324 TRAIPQ9BWF2 469 aa9.95□□□□□ -0.82
NPLOC4-204ENST00000570324 IFT122Q9HBG6 1241 aa9.95□□□□□ -0.82
NPLOC4-204ENST00000570324 ANKEF1Q9NU02 776 aa9.95□□□□□ -0.82
NPLOC4-204ENST00000570324 AGPAT5Q9NUQ2 364 aa9.95□□□□□ -0.82
NPLOC4-204ENST00000570324 CLEC1BQ9P126 229 aa9.95□□□□□ -0.82
NPLOC4-204ENST00000570324 PCDHB2Q9Y5E7 798 aa9.95□□□□□ -0.82
NPLOC4-204ENST00000570324 TRANK1O15050 2925 aa9.95□□□□□ -0.82
NPLOC4-204ENST00000570324 CNTNAP2Q9UHC6 1331 aa9.94□□□□□ -0.82
NPLOC4-204ENST00000570324 C19orf67A6NJJ6 358 aa9.94□□□□□ -0.82
NPLOC4-204ENST00000570324 SPDYE4A6NLX3 237 aa9.94□□□□□ -0.82
NPLOC4-204ENST00000570324 INO80B-WBP1J3KQ70 363 aa9.94□□□□□ -0.82
NPLOC4-204ENST00000570324 FSCN2O14926 492 aa9.94□□□□□ -0.82
NPLOC4-204ENST00000570324 ZBTB39O15060 712 aa9.94□□□□□ -0.82
NPLOC4-204ENST00000570324 ZNF623O75123 536 aa9.94□□□□□ -0.82
NPLOC4-204ENST00000570324 DGAT1O75907 488 aa9.94□□□□□ -0.82
NPLOC4-204ENST00000570324 EYA4O95677 639 aa9.94□□□□□ -0.82
NPLOC4-204ENST00000570324 CXCL14O95715 111 aa9.94□□□□□ -0.82
NPLOC4-204ENST00000570324 ATF7P17544 494 aaPredicted RBP9.94□□□□□ -0.82
NPLOC4-204ENST00000570324 TECP42680 631 aa9.94□□□□□ -0.82
NPLOC4-204ENST00000570324 HMGN5P82970 282 aaKnown RBP9.94□□□□□ -0.82
NPLOC4-204ENST00000570324 SPIRE1Q08AE8 756 aa9.94□□□□□ -0.82
NPLOC4-204ENST00000570324 PCBP1Q15365 356 aaKnown RBP eCLIP9.94□□□□□ -0.82
NPLOC4-204ENST00000570324 HACE1Q8IYU2 909 aa9.94□□□□□ -0.82
NPLOC4-204ENST00000570324 SLC39A11Q8N1S5 342 aa9.94□□□□□ -0.82
NPLOC4-204ENST00000570324 SMRP1Q8NCR6 262 aa9.94□□□□□ -0.82
NPLOC4-204ENST00000570324 PIGOQ8TEQ8 1089 aa9.94□□□□□ -0.82
NPLOC4-204ENST00000570324 CASP10Q92851 521 aa9.94□□□□□ -0.82
NPLOC4-204ENST00000570324 TNFRSF25Q93038 417 aa9.94□□□□□ -0.82
NPLOC4-204ENST00000570324 LLPHQ9BRT6 129 aaKnown RBP9.94□□□□□ -0.82
NPLOC4-204ENST00000570324 TRIM6Q9C030 488 aaPredicted RBP9.94□□□□□ -0.82
NPLOC4-204ENST00000570324 RSAD1Q9HA92 442 aa9.94□□□□□ -0.82
NPLOC4-204ENST00000570324 UBN1Q9NPG3 1134 aa9.94□□□□□ -0.82
NPLOC4-204ENST00000570324 TBC1D13Q9NVG8 400 aa9.94□□□□□ -0.82
NPLOC4-204ENST00000570324 KANSL3Q9P2N6 904 aa9.94□□□□□ -0.82
NPLOC4-204ENST00000570324 RAPGEFL1Q9UHV5 662 aa9.94□□□□□ -0.82
NPLOC4-204ENST00000570324 NOL7Q9UMY1 257 aaKnown RBP9.94□□□□□ -0.82
NPLOC4-204ENST00000570324 USP15Q9Y4E8 981 aaPredicted RBP9.94□□□□□ -0.82
NPLOC4-204ENST00000570324 NCOR1O75376 2440 aa9.94□□□□□ -0.82
NPLOC4-204ENST00000570324 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.93□□□□□ -0.82
NPLOC4-204ENST00000570324 POTEMA6NI47 508 aa9.93□□□□□ -0.82
NPLOC4-204ENST00000570324 HIDE1A8MVS5 230 aa9.93□□□□□ -0.82
NPLOC4-204ENST00000570324 PRR33A8MZF0 331 aa9.93□□□□□ -0.82
NPLOC4-204ENST00000570324 NR1I2O75469 434 aa9.93□□□□□ -0.82
NPLOC4-204ENST00000570324 LYPLA2O95372 231 aa9.93□□□□□ -0.82
NPLOC4-204ENST00000570324 GLP2RO95838 553 aa9.93□□□□□ -0.82
NPLOC4-204ENST00000570324 ALDH2P05091 517 aa9.93□□□□□ -0.82
NPLOC4-204ENST00000570324 XRCC6P12956 609 aaKnown RBP eCLIP9.93□□□□□ -0.82
NPLOC4-204ENST00000570324 ITGA4P13612 1032 aa9.93□□□□□ -0.82
NPLOC4-204ENST00000570324 HOXB8P17481 243 aaPredicted RBP9.93□□□□□ -0.82
NPLOC4-204ENST00000570324 AXLP30530 894 aa9.93□□□□□ -0.82
NPLOC4-204ENST00000570324 RBM25P49756 843 aaKnown RBP9.93□□□□□ -0.82
NPLOC4-204ENST00000570324 RBM10P98175 930 aaKnown RBP9.93□□□□□ -0.82
NPLOC4-204ENST00000570324 GIT2Q14161 759 aa9.93□□□□□ -0.82
NPLOC4-204ENST00000570324 ZNF174Q15697 407 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms