RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 MTCH2Q9Y6C9 303 aa15.32■□□□□ 0.04
HERPUD1-218ENST00000569569 TBKBP1A7MCY6 615 aa15.31■□□□□ 0.04
HERPUD1-218ENST00000569569 C5orf67F2Z3F1 127 aa15.31■□□□□ 0.04
HERPUD1-218ENST00000569569 H3BNC9 293 aa15.31■□□□□ 0.04
HERPUD1-218ENST00000569569 INO80B-WBP1J3KQ70 363 aa15.31■□□□□ 0.04
HERPUD1-218ENST00000569569 ERLIN2O94905 339 aa15.31■□□□□ 0.04
HERPUD1-218ENST00000569569 LINC00271P0C7V0 271 aa15.31■□□□□ 0.04
HERPUD1-218ENST00000569569 AXLP30530 894 aa15.31■□□□□ 0.04
HERPUD1-218ENST00000569569 CTNNB1P35222 781 aa15.31■□□□□ 0.04
HERPUD1-218ENST00000569569 UBA7P41226 1012 aa15.31■□□□□ 0.04
HERPUD1-218ENST00000569569 GATMP50440 423 aa15.31■□□□□ 0.04
HERPUD1-218ENST00000569569 NCBP1Q09161 790 aaKnown RBP15.31■□□□□ 0.04
HERPUD1-218ENST00000569569 GPM6BQ13491 265 aa15.31■□□□□ 0.04
HERPUD1-218ENST00000569569 PTPAQ15257 358 aa15.31■□□□□ 0.04
HERPUD1-218ENST00000569569 ZNF598Q86UK7 904 aaKnown RBP15.31■□□□□ 0.04
HERPUD1-218ENST00000569569 CABP7Q86V35 215 aa15.31■□□□□ 0.04
HERPUD1-218ENST00000569569 PPM1EQ8WY54 764 aa15.31■□□□□ 0.04
HERPUD1-218ENST00000569569 CDK5RAP3Q96JB5 506 aa15.31■□□□□ 0.04
HERPUD1-218ENST00000569569 PNMA5Q96PV4 448 aa15.31■□□□□ 0.04
HERPUD1-218ENST00000569569 FAM105AQ9NUU6 356 aa15.31■□□□□ 0.04
HERPUD1-218ENST00000569569 MRPL42Q9Y6G3 142 aaKnown RBP15.31■□□□□ 0.04
HERPUD1-218ENST00000569569 LRRIQ4A6NIV6 560 aa15.3■□□□□ 0.04
HERPUD1-218ENST00000569569 ZNF623O75123 536 aa15.3■□□□□ 0.04
HERPUD1-218ENST00000569569 FGFR1P11362 822 aa15.3■□□□□ 0.04
HERPUD1-218ENST00000569569 HOXA11P31270 313 aaPredicted RBP15.3■□□□□ 0.04
HERPUD1-218ENST00000569569 RAB27AP51159 221 aa15.3■□□□□ 0.04
HERPUD1-218ENST00000569569 MBTD1Q05BQ5 628 aa15.3■□□□□ 0.04
HERPUD1-218ENST00000569569 PPP2R5AQ15172 486 aa15.3■□□□□ 0.04
HERPUD1-218ENST00000569569 CCDC85BQ15834 202 aaPredicted RBP15.3■□□□□ 0.04
HERPUD1-218ENST00000569569 ATG2AQ2TAZ0 1938 aa15.3■□□□□ 0.04
HERPUD1-218ENST00000569569 KCNK18Q7Z418 384 aa15.3■□□□□ 0.04
HERPUD1-218ENST00000569569 ABI1Q8IZP0 508 aa15.3■□□□□ 0.04
HERPUD1-218ENST00000569569 RNF169Q8NCN4 708 aa15.3■□□□□ 0.04
HERPUD1-218ENST00000569569 PRUNE2Q8WUY3 3088 aa15.3■□□□□ 0.04
HERPUD1-218ENST00000569569 KIFAP3Q92845 792 aa15.3■□□□□ 0.04
HERPUD1-218ENST00000569569 CALML4Q96GE6 196 aa15.3■□□□□ 0.04
HERPUD1-218ENST00000569569 PLVAPQ9BX97 442 aa15.3■□□□□ 0.04
HERPUD1-218ENST00000569569 TMEM117Q9H0C3 514 aa15.3■□□□□ 0.04
HERPUD1-218ENST00000569569 PLXNA4Q9HCM2 1894 aa15.3■□□□□ 0.04
HERPUD1-218ENST00000569569 TDRD15B5MCY1 1934 aaKnown RBP15.29■□□□□ 0.04
HERPUD1-218ENST00000569569 ATF7P17544 494 aaPredicted RBP15.29■□□□□ 0.04
HERPUD1-218ENST00000569569 MARCKSP29966 332 aaPredicted RBP15.29■□□□□ 0.04
HERPUD1-218ENST00000569569 NAMPTP43490 491 aa15.29■□□□□ 0.04
HERPUD1-218ENST00000569569 CEBPZQ03701 1054 aaKnown RBP15.29■□□□□ 0.04
HERPUD1-218ENST00000569569 GRIN1Q05586 938 aa15.29■□□□□ 0.04
HERPUD1-218ENST00000569569 NAALADL2Q58DX5 795 aa15.29■□□□□ 0.04
HERPUD1-218ENST00000569569 RINT1Q6NUQ1 792 aa15.29■□□□□ 0.04
HERPUD1-218ENST00000569569 C1orf186Q6ZWK4 172 aa15.29■□□□□ 0.04
HERPUD1-218ENST00000569569 ZBTB8OSQ8IWT0 167 aa15.29■□□□□ 0.04
HERPUD1-218ENST00000569569 SYT2Q8N9I0 419 aaPredicted RBP15.29■□□□□ 0.04
HERPUD1-218ENST00000569569 SPRYD3Q8NCJ5 442 aa15.29■□□□□ 0.04
HERPUD1-218ENST00000569569 P2RX5Q93086 422 aa15.29■□□□□ 0.04
HERPUD1-218ENST00000569569 IFT74Q96LB3 600 aa15.29■□□□□ 0.04
HERPUD1-218ENST00000569569 CASD1Q96PB1 797 aa15.29■□□□□ 0.04
HERPUD1-218ENST00000569569 USP28Q96RU2 1077 aa15.29■□□□□ 0.04
HERPUD1-218ENST00000569569 PLIN2Q99541 437 aa15.29■□□□□ 0.04
HERPUD1-218ENST00000569569 C11orf84Q9BUA3 381 aaPredicted RBP15.29■□□□□ 0.04
HERPUD1-218ENST00000569569 C2orf40Q9H1Z8 148 aa15.29■□□□□ 0.04
HERPUD1-218ENST00000569569 RNF19AQ9NV58 838 aa15.29■□□□□ 0.04
HERPUD1-218ENST00000569569 SRPRBQ9Y5M8 271 aaKnown RBP15.29■□□□□ 0.04
HERPUD1-218ENST00000569569 TCHHQ07283 1943 aa15.29■□□□□ 0.04
HERPUD1-218ENST00000569569 TRIP11Q15643 1979 aa15.28■□□□□ 0.04
HERPUD1-218ENST00000569569 TSPAN1O60635 241 aa15.28■□□□□ 0.04
HERPUD1-218ENST00000569569 SLC39A14Q15043 492 aa15.28■□□□□ 0.04
HERPUD1-218ENST00000569569 AMHR2Q16671 573 aa15.28■□□□□ 0.04
HERPUD1-218ENST00000569569 PTPROQ16827 1216 aa15.28■□□□□ 0.04
HERPUD1-218ENST00000569569 TMEM119Q4V9L6 283 aa15.28■□□□□ 0.04
HERPUD1-218ENST00000569569 SPOUT1Q5T280 376 aaKnown RBP15.28■□□□□ 0.04
HERPUD1-218ENST00000569569 CDCA2Q69YH5 1023 aaPredicted RBP15.28■□□□□ 0.04
HERPUD1-218ENST00000569569 NOTUMQ6P988 496 aa15.28■□□□□ 0.04
HERPUD1-218ENST00000569569 MICALL1Q8N3F8 863 aa15.28■□□□□ 0.04
HERPUD1-218ENST00000569569 SLC17A8Q8NDX2 589 aa15.28■□□□□ 0.04
HERPUD1-218ENST00000569569 CNNM3Q8NE01 707 aa15.28■□□□□ 0.04
HERPUD1-218ENST00000569569 RSPH1Q8WYR4 309 aa15.28■□□□□ 0.04
HERPUD1-218ENST00000569569 BSNDQ8WZ55 320 aa15.28■□□□□ 0.04
HERPUD1-218ENST00000569569 PGBD4Q96DM1 585 aa15.28■□□□□ 0.04
HERPUD1-218ENST00000569569 CCDC51Q96ER9 411 aa15.28■□□□□ 0.04
HERPUD1-218ENST00000569569 PRIMPOLQ96LW4 560 aa15.28■□□□□ 0.04
HERPUD1-218ENST00000569569 ZNF396Q96N95 335 aaPredicted RBP15.28■□□□□ 0.04
HERPUD1-218ENST00000569569 TIPINQ9BVW5 301 aa15.28■□□□□ 0.04
HERPUD1-218ENST00000569569 CCSER1Q9C0I3 900 aa15.28■□□□□ 0.04
HERPUD1-218ENST00000569569 POLD4Q9HCU8 107 aa15.28■□□□□ 0.04
HERPUD1-218ENST00000569569 AAASQ9NRG9 546 aa15.28■□□□□ 0.04
HERPUD1-218ENST00000569569 TYW1Q9NV66 732 aaKnown RBP15.28■□□□□ 0.04
HERPUD1-218ENST00000569569 PRMT7Q9NVM4 692 aaPredicted RBP15.28■□□□□ 0.04
HERPUD1-218ENST00000569569 PCDHB2Q9Y5E7 798 aa15.28■□□□□ 0.04
HERPUD1-218ENST00000569569 MORC2Q9Y6X9 1032 aaPredicted RBP15.28■□□□□ 0.04
HERPUD1-218ENST00000569569 BRWD1Q9NSI6 2320 aa15.28■□□□□ 0.04
HERPUD1-218ENST00000569569 SSBP05455 408 aaKnown RBP eCLIP15.27■□□□□ 0.04
HERPUD1-218ENST00000569569 PLA2G4BP0C869 781 aa15.27■□□□□ 0.04
HERPUD1-218ENST00000569569 ATXN8OSP0DMR3 200 aa15.27■□□□□ 0.04
HERPUD1-218ENST00000569569 ZSCAN22P10073 491 aaPredicted RBP15.27■□□□□ 0.04
HERPUD1-218ENST00000569569 ARF4P18085 180 aaPredicted RBP15.27■□□□□ 0.04
HERPUD1-218ENST00000569569 FAM187BQ17R55 369 aa15.27■□□□□ 0.04
HERPUD1-218ENST00000569569 CLLU1OSQ5K130 101 aa15.27■□□□□ 0.04
HERPUD1-218ENST00000569569 UBXN11Q5T124 520 aa15.27■□□□□ 0.04
HERPUD1-218ENST00000569569 MRPL10Q7Z7H8 261 aaKnown RBP15.27■□□□□ 0.04
HERPUD1-218ENST00000569569 DEPTORQ8TB45 409 aa15.27■□□□□ 0.04
HERPUD1-218ENST00000569569 HELQQ8TDG4 1101 aa15.27■□□□□ 0.04
HERPUD1-218ENST00000569569 LPPQ93052 612 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms