RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 NCAPG2Q86XI2 1143 aa7.56□□□□□ -1.2
CNOT1-216ENST00000569240 TTC39CQ8N584 583 aa7.56□□□□□ -1.2
CNOT1-216ENST00000569240 MYCT1Q8N699 235 aa7.56□□□□□ -1.2
CNOT1-216ENST00000569240 TSSK1BQ9BXA7 367 aa7.56□□□□□ -1.2
CNOT1-216ENST00000569240 ADD3Q9UEY8 706 aaKnown RBP7.56□□□□□ -1.2
CNOT1-216ENST00000569240 CCPG1Q9ULG6 757 aa7.56□□□□□ -1.2
CNOT1-216ENST00000569240 CDY2AQ9Y6F7 541 aa7.56□□□□□ -1.2
CNOT1-216ENST00000569240 CDY1Q9Y6F8 540 aa7.56□□□□□ -1.2
CNOT1-216ENST00000569240 URB2Q14146 1524 aaKnown RBP7.56□□□□□ -1.2
CNOT1-216ENST00000569240 A0A087WXM4 84 aa7.56□□□□□ -1.2
CNOT1-216ENST00000569240 FAM83GA6ND36 823 aa7.56□□□□□ -1.2
CNOT1-216ENST00000569240 SMCO2A6NFE2 343 aa7.56□□□□□ -1.2
CNOT1-216ENST00000569240 DAPK3O43293 454 aa7.56□□□□□ -1.2
CNOT1-216ENST00000569240 TOM1L1O75674 476 aa7.56□□□□□ -1.2
CNOT1-216ENST00000569240 CPA3P15088 417 aa7.56□□□□□ -1.2
CNOT1-216ENST00000569240 NCF2P19878 526 aaPredicted RBP7.56□□□□□ -1.2
CNOT1-216ENST00000569240 MTTPP55157 894 aa7.56□□□□□ -1.2
CNOT1-216ENST00000569240 HDLBPQ00341 1268 aaKnown RBP7.56□□□□□ -1.2
CNOT1-216ENST00000569240 CENPCQ03188 943 aa7.56□□□□□ -1.2
CNOT1-216ENST00000569240 OTUD7BQ6GQQ9 843 aa7.56□□□□□ -1.2
CNOT1-216ENST00000569240 MTHFD1LQ6UB35 978 aa7.56□□□□□ -1.2
CNOT1-216ENST00000569240 ZNF804AQ7Z570 1209 aa7.56□□□□□ -1.2
CNOT1-216ENST00000569240 MRRFQ96E11 262 aaKnown RBP7.56□□□□□ -1.2
CNOT1-216ENST00000569240 CEP95Q96GE4 821 aa7.56□□□□□ -1.2
CNOT1-216ENST00000569240 LRRC1Q9BTT6 524 aa7.56□□□□□ -1.2
CNOT1-216ENST00000569240 ASPSCR1Q9BZE9 553 aa7.56□□□□□ -1.2
CNOT1-216ENST00000569240 TTC37Q6PGP7 1564 aa7.56□□□□□ -1.2
CNOT1-216ENST00000569240 ARHGEF11O15085 1522 aa7.56□□□□□ -1.2
CNOT1-216ENST00000569240 PNMA6EA0A0J9YXQ4 647 aa7.56□□□□□ -1.2
CNOT1-216ENST00000569240 TBC1D4O60343 1298 aa7.56□□□□□ -1.2
CNOT1-216ENST00000569240 NR1H2P55055 460 aa7.56□□□□□ -1.2
CNOT1-216ENST00000569240 RPL26P61254 145 aaKnown RBP7.56□□□□□ -1.2
CNOT1-216ENST00000569240 SPIDRQ14159 915 aa7.56□□□□□ -1.2
CNOT1-216ENST00000569240 MESDQ14696 234 aa7.56□□□□□ -1.2
CNOT1-216ENST00000569240 TUBA3EQ6PEY2 450 aa7.56□□□□□ -1.2
CNOT1-216ENST00000569240 TMC5Q6UXY8 1006 aa7.56□□□□□ -1.2
CNOT1-216ENST00000569240 RBM12BQ8IXT5 1001 aaKnown RBP7.56□□□□□ -1.2
CNOT1-216ENST00000569240 ZNF184Q99676 751 aaPredicted RBP7.56□□□□□ -1.2
CNOT1-216ENST00000569240 PAGR1Q9BTK6 254 aa7.56□□□□□ -1.2
CNOT1-216ENST00000569240 FUCA2Q9BTY2 467 aa7.56□□□□□ -1.2
CNOT1-216ENST00000569240 KLHL25Q9H0H3 589 aa7.56□□□□□ -1.2
CNOT1-216ENST00000569240 VAT1LQ9HCJ6 419 aa7.56□□□□□ -1.2
CNOT1-216ENST00000569240 TLR7Q9NYK1 1049 aaKnown RBP7.56□□□□□ -1.2
CNOT1-216ENST00000569240 SNX24Q9Y343 169 aa7.56□□□□□ -1.2
CNOT1-216ENST00000569240 RTN3O95197 1032 aaPredicted RBP7.55□□□□□ -1.2
CNOT1-216ENST00000569240 SRGNP10124 158 aa7.55□□□□□ -1.2
CNOT1-216ENST00000569240 PSMC3P17980 439 aa7.55□□□□□ -1.2
CNOT1-216ENST00000569240 DBNDD2Q9BQY9 259 aa7.55□□□□□ -1.2
CNOT1-216ENST00000569240 MED7O43513 233 aa7.55□□□□□ -1.2
CNOT1-216ENST00000569240 EFCAB14O75071 495 aa7.55□□□□□ -1.2
CNOT1-216ENST00000569240 ATP1A1P05023 1023 aaKnown RBP7.55□□□□□ -1.2
CNOT1-216ENST00000569240 NR2F2P24468 414 aa7.55□□□□□ -1.2
CNOT1-216ENST00000569240 RBM5P52756 815 aaKnown RBP eCLIP7.55□□□□□ -1.2
CNOT1-216ENST00000569240 ZNF827Q17R98 1081 aa7.55□□□□□ -1.2
CNOT1-216ENST00000569240 LACTB2Q53H82 288 aaPredicted RBP7.55□□□□□ -1.2
CNOT1-216ENST00000569240 FAM47EQ6ZV65 393 aa7.55□□□□□ -1.2
CNOT1-216ENST00000569240 MARK2Q7KZI7 788 aaKnown RBP7.55□□□□□ -1.2
CNOT1-216ENST00000569240 TMPRSS6Q8IU80 811 aa7.55□□□□□ -1.2
CNOT1-216ENST00000569240 EZH1Q92800 747 aaPredicted RBP7.55□□□□□ -1.2
CNOT1-216ENST00000569240 FAR2Q96K12 515 aa7.55□□□□□ -1.2
CNOT1-216ENST00000569240 USP44Q9H0E7 712 aa7.55□□□□□ -1.2
CNOT1-216ENST00000569240 PCDHA4Q9UN74 947 aa7.55□□□□□ -1.2
CNOT1-216ENST00000569240 A0A1W2PP64 1363 aa7.55□□□□□ -1.2
CNOT1-216ENST00000569240 H3BNX3 289 aa7.55□□□□□ -1.2
CNOT1-216ENST00000569240 SGK1O00141 431 aa7.55□□□□□ -1.2
CNOT1-216ENST00000569240 LSM1O15116 133 aaKnown RBP7.55□□□□□ -1.2
CNOT1-216ENST00000569240 OCM2P0CE71 109 aa7.55□□□□□ -1.2
CNOT1-216ENST00000569240 OCMP0CE72 109 aaPredicted RBP7.55□□□□□ -1.2
CNOT1-216ENST00000569240 ATICP31939 592 aa7.55□□□□□ -1.2
CNOT1-216ENST00000569240 SLCO1A2P46721 670 aa7.55□□□□□ -1.2
CNOT1-216ENST00000569240 RAB25P57735 213 aa7.55□□□□□ -1.2
CNOT1-216ENST00000569240 RASA3Q14644 834 aa7.55□□□□□ -1.2
CNOT1-216ENST00000569240 SLC18A3Q16572 532 aa7.55□□□□□ -1.2
CNOT1-216ENST00000569240 RBM20Q5T481 1227 aaKnown RBP7.55□□□□□ -1.2
CNOT1-216ENST00000569240 OTUD6AQ7L8S5 288 aa7.55□□□□□ -1.2
CNOT1-216ENST00000569240 GALNT15Q8N3T1 639 aa7.55□□□□□ -1.2
CNOT1-216ENST00000569240 MAGEB6Q8N7X4 407 aa7.55□□□□□ -1.2
CNOT1-216ENST00000569240 HDAC11Q96DB2 347 aa7.55□□□□□ -1.2
CNOT1-216ENST00000569240 ZSCAN10Q96SZ4 725 aaPredicted RBP7.55□□□□□ -1.2
CNOT1-216ENST00000569240 DISC1Q9NRI5 854 aa7.55□□□□□ -1.2
CNOT1-216ENST00000569240 SQORQ9Y6N5 450 aa7.55□□□□□ -1.2
CNOT1-216ENST00000569240 USP42Q9H9J4 1324 aaKnown RBP7.55□□□□□ -1.2
CNOT1-216ENST00000569240 POTECB2RU33 542 aa7.55□□□□□ -1.2
CNOT1-216ENST00000569240 PIK3R2O00459 728 aa7.55□□□□□ -1.2
CNOT1-216ENST00000569240 LPXNO60711 386 aa7.55□□□□□ -1.2
CNOT1-216ENST00000569240 S100A9P06702 114 aaKnown RBP7.55□□□□□ -1.2
CNOT1-216ENST00000569240 RAP1GAPP47736 663 aa7.55□□□□□ -1.2
CNOT1-216ENST00000569240 OLR1P78380 273 aa7.55□□□□□ -1.2
CNOT1-216ENST00000569240 XRCC4Q13426 336 aa7.55□□□□□ -1.2
CNOT1-216ENST00000569240 POLA2Q14181 598 aa7.55□□□□□ -1.2
CNOT1-216ENST00000569240 ARID5BQ14865 1188 aa7.55□□□□□ -1.2
CNOT1-216ENST00000569240 AAGABQ6PD74 315 aa7.55□□□□□ -1.2
CNOT1-216ENST00000569240 TRIM50Q86XT4 487 aa7.55□□□□□ -1.2
CNOT1-216ENST00000569240 EXOC8Q8IYI6 725 aa7.55□□□□□ -1.2
CNOT1-216ENST00000569240 ANKRD13CQ8N6S4 541 aa7.55□□□□□ -1.2
CNOT1-216ENST00000569240 USP38Q8NB14 1042 aa7.55□□□□□ -1.2
CNOT1-216ENST00000569240 PDPRQ8NCN5 879 aa7.55□□□□□ -1.2
CNOT1-216ENST00000569240 LENG1Q96BZ8 264 aaPredicted RBP7.55□□□□□ -1.2
CNOT1-216ENST00000569240 LRRC39Q96DD0 335 aa7.55□□□□□ -1.2
CNOT1-216ENST00000569240 GINS4Q9BRT9 223 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms