RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 OTUD6AQ7L8S5 288 aa8.72□□□□□ -1.01
CDH3-209ENST00000569080 CATSPER4Q7RTX7 472 aa8.72□□□□□ -1.01
CDH3-209ENST00000569080 SRGAP1Q7Z6B7 1085 aa8.72□□□□□ -1.01
CDH3-209ENST00000569080 TMEM173Q86WV6 379 aaPredicted RBP8.72□□□□□ -1.01
CDH3-209ENST00000569080 CATSPER3Q86XQ3 398 aa8.72□□□□□ -1.01
CDH3-209ENST00000569080 EXOC8Q8IYI6 725 aa8.72□□□□□ -1.01
CDH3-209ENST00000569080 SLC39A11Q8N1S5 342 aa8.72□□□□□ -1.01
CDH3-209ENST00000569080 RNF149Q8NC42 400 aa8.72□□□□□ -1.01
CDH3-209ENST00000569080 IL27Q8NEV9 243 aa8.72□□□□□ -1.01
CDH3-209ENST00000569080 VN1R2Q8NFZ6 395 aa8.72□□□□□ -1.01
CDH3-209ENST00000569080 HELQQ8TDG4 1101 aa8.72□□□□□ -1.01
CDH3-209ENST00000569080 PIGOQ8TEQ8 1089 aa8.72□□□□□ -1.01
CDH3-209ENST00000569080 TCP11Q8WWU5 503 aa8.72□□□□□ -1.01
CDH3-209ENST00000569080 LPPQ93052 612 aa8.72□□□□□ -1.01
CDH3-209ENST00000569080 TMX3Q96JJ7 454 aa8.72□□□□□ -1.01
CDH3-209ENST00000569080 MSLNLQ96KJ4 702 aa8.72□□□□□ -1.01
CDH3-209ENST00000569080 POLR3CQ9BUI4 534 aaPredicted RBP8.72□□□□□ -1.01
CDH3-209ENST00000569080 NFKBIZQ9BYH8 718 aa8.72□□□□□ -1.01
CDH3-209ENST00000569080 INO80BQ9C086 356 aaPredicted RBP8.72□□□□□ -1.01
CDH3-209ENST00000569080 TUFT1Q9NNX1 390 aa8.72□□□□□ -1.01
CDH3-209ENST00000569080 TLR9Q9NR96 1032 aa8.72□□□□□ -1.01
CDH3-209ENST00000569080 CLDND1Q9NY35 253 aa8.72□□□□□ -1.01
CDH3-209ENST00000569080 LZTS1Q9Y250 596 aa8.72□□□□□ -1.01
CDH3-209ENST00000569080 PCDHB12Q9Y5F1 795 aa8.72□□□□□ -1.01
CDH3-209ENST00000569080 A0A087WWV3 80 aa8.71□□□□□ -1.02
CDH3-209ENST00000569080 NCK2O43639 380 aa8.71□□□□□ -1.02
CDH3-209ENST00000569080 ST18O60284 1047 aa8.71□□□□□ -1.02
CDH3-209ENST00000569080 USO1O60763 962 aaKnown RBP8.71□□□□□ -1.02
CDH3-209ENST00000569080 SRGAP2CP0DJJ0 459 aa8.71□□□□□ -1.02
CDH3-209ENST00000569080 RPA1P27694 616 aa8.71□□□□□ -1.02
CDH3-209ENST00000569080 FXR2P51116 673 aaKnown RBP eCLIP8.71□□□□□ -1.02
CDH3-209ENST00000569080 RAB27AP51159 221 aa8.71□□□□□ -1.02
CDH3-209ENST00000569080 AFF1P51825 1210 aaKnown RBP8.71□□□□□ -1.02
CDH3-209ENST00000569080 PTENP60484 403 aa8.71□□□□□ -1.02
CDH3-209ENST00000569080 ERVFC1P60507 584 aa8.71□□□□□ -1.02
CDH3-209ENST00000569080 MBTD1Q05BQ5 628 aa8.71□□□□□ -1.02
CDH3-209ENST00000569080 POU5F1BQ06416 359 aa8.71□□□□□ -1.02
CDH3-209ENST00000569080 ADAM15Q13444 863 aa8.71□□□□□ -1.02
CDH3-209ENST00000569080 KCNC3Q14003 757 aa8.71□□□□□ -1.02
CDH3-209ENST00000569080 ZNF174Q15697 407 aa8.71□□□□□ -1.02
CDH3-209ENST00000569080 ECM1Q16610 540 aa8.71□□□□□ -1.02
CDH3-209ENST00000569080 CDCA2Q69YH5 1023 aaPredicted RBP8.71□□□□□ -1.02
CDH3-209ENST00000569080 TWF2Q6IBS0 349 aaKnown RBP8.71□□□□□ -1.02
CDH3-209ENST00000569080 KCNT2Q6UVM3 1135 aa8.71□□□□□ -1.02
CDH3-209ENST00000569080 AGMOQ6ZNB7 445 aa8.71□□□□□ -1.02
CDH3-209ENST00000569080 FAM178BQ8IXR5 827 aa8.71□□□□□ -1.02
CDH3-209ENST00000569080 THNSL1Q8IYQ7 743 aa8.71□□□□□ -1.02
CDH3-209ENST00000569080 ABI1Q8IZP0 508 aa8.71□□□□□ -1.02
CDH3-209ENST00000569080 EFHBQ8N7U6 833 aa8.71□□□□□ -1.02
CDH3-209ENST00000569080 FAM184AQ8NB25 1140 aa8.71□□□□□ -1.02
CDH3-209ENST00000569080 RNF169Q8NCN4 708 aa8.71□□□□□ -1.02
CDH3-209ENST00000569080 BCL7CQ8WUZ0 217 aaPredicted RBP8.71□□□□□ -1.02
CDH3-209ENST00000569080 RSPH1Q8WYR4 309 aa8.71□□□□□ -1.02
CDH3-209ENST00000569080 MRPS27Q92552 414 aaKnown RBP8.71□□□□□ -1.02
CDH3-209ENST00000569080 MRPL9Q9BYD2 267 aaKnown RBP8.71□□□□□ -1.02
CDH3-209ENST00000569080 POLR3FQ9H1D9 316 aaPredicted RBP8.71□□□□□ -1.02
CDH3-209ENST00000569080 GPRC5CQ9NQ84 441 aa8.71□□□□□ -1.02
CDH3-209ENST00000569080 AAASQ9NRG9 546 aa8.71□□□□□ -1.02
CDH3-209ENST00000569080 TBC1D13Q9NVG8 400 aa8.71□□□□□ -1.02
CDH3-209ENST00000569080 CLEC1BQ9P126 229 aa8.71□□□□□ -1.02
CDH3-209ENST00000569080 DBR1Q9UK59 544 aaKnown RBP8.71□□□□□ -1.02
CDH3-209ENST00000569080 PCDHB6Q9Y5E3 794 aa8.71□□□□□ -1.02
CDH3-209ENST00000569080 PCDHB2Q9Y5E7 798 aa8.71□□□□□ -1.02
CDH3-209ENST00000569080 INPPL1O15357 1258 aa8.7□□□□□ -1.02
CDH3-209ENST00000569080 ASAP2O43150 1006 aa8.7□□□□□ -1.02
CDH3-209ENST00000569080 MBTPS2O43462 519 aa8.7□□□□□ -1.02
CDH3-209ENST00000569080 OFD1O75665 1012 aa8.7□□□□□ -1.02
CDH3-209ENST00000569080 EYA4O95677 639 aa8.7□□□□□ -1.02
CDH3-209ENST00000569080 SKIP12755 728 aa8.7□□□□□ -1.02
CDH3-209ENST00000569080 XRCC6P12956 609 aaKnown RBP eCLIP8.7□□□□□ -1.02
CDH3-209ENST00000569080 PPM1AP35813 382 aa8.7□□□□□ -1.02
CDH3-209ENST00000569080 TECP42680 631 aa8.7□□□□□ -1.02
CDH3-209ENST00000569080 RBM10P98175 930 aaKnown RBP8.7□□□□□ -1.02
CDH3-209ENST00000569080 ZP2Q05996 745 aa8.7□□□□□ -1.02
CDH3-209ENST00000569080 MXD4Q14582 209 aaPredicted RBP8.7□□□□□ -1.02
CDH3-209ENST00000569080 PCBP1Q15365 356 aaKnown RBP eCLIP8.7□□□□□ -1.02
CDH3-209ENST00000569080 IL17AQ16552 155 aa8.7□□□□□ -1.02
CDH3-209ENST00000569080 DUSP6Q16828 381 aa8.7□□□□□ -1.02
CDH3-209ENST00000569080 PUS10Q3MIT2 529 aaKnown RBP8.7□□□□□ -1.02
CDH3-209ENST00000569080 LONRF3Q496Y0 759 aa8.7□□□□□ -1.02
CDH3-209ENST00000569080 SPOUT1Q5T280 376 aaKnown RBP8.7□□□□□ -1.02
CDH3-209ENST00000569080 MRPL10Q7Z7H8 261 aaKnown RBP8.7□□□□□ -1.02
CDH3-209ENST00000569080 IGSF22Q8N9C0 903 aa8.7□□□□□ -1.02
CDH3-209ENST00000569080 SMRP1Q8NCR6 262 aa8.7□□□□□ -1.02
CDH3-209ENST00000569080 SMG8Q8ND04 991 aaKnown RBP8.7□□□□□ -1.02
CDH3-209ENST00000569080 BSNDQ8WZ55 320 aa8.7□□□□□ -1.02
CDH3-209ENST00000569080 ZNF558Q96NG5 402 aa8.7□□□□□ -1.02
CDH3-209ENST00000569080 VN1R3Q9BXE9 311 aa8.7□□□□□ -1.02
CDH3-209ENST00000569080 EIF2AQ9BY44 585 aaKnown RBP8.7□□□□□ -1.02
CDH3-209ENST00000569080 NRDE2Q9H7Z3 1164 aa8.7□□□□□ -1.02
CDH3-209ENST00000569080 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.7□□□□□ -1.02
CDH3-209ENST00000569080 C19orf67A6NJJ6 358 aa8.69□□□□□ -1.02
CDH3-209ENST00000569080 PP2D1A8MPX8 630 aa8.69□□□□□ -1.02
CDH3-209ENST00000569080 HIDE1A8MVS5 230 aa8.69□□□□□ -1.02
CDH3-209ENST00000569080 PER2O15055 1255 aa8.69□□□□□ -1.02
CDH3-209ENST00000569080 B4GALT5O43286 388 aa8.69□□□□□ -1.02
CDH3-209ENST00000569080 EDN1P05305 212 aa8.69□□□□□ -1.02
CDH3-209ENST00000569080 ARF4P18085 180 aaPredicted RBP8.69□□□□□ -1.02
CDH3-209ENST00000569080 NCLP19338 710 aaKnown RBP8.69□□□□□ -1.02
CDH3-209ENST00000569080 MUTP22033 750 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms