RNA–Protein interactions for RNA: ENST00000568919.1

SIN3A-212, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 2

Gene SIN3A, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-212ENST00000568919 XIRP2A4UGR9 3374 aa20.17■□□□□ 0.82
SIN3A-212ENST00000568919 CUL9Q8IWT3 2517 aa20.17■□□□□ 0.82
SIN3A-212ENST00000568919 H3BQV1 296 aa20.17■□□□□ 0.82
SIN3A-212ENST00000568919 FGF18O76093 207 aa20.17■□□□□ 0.82
SIN3A-212ENST00000568919 LAG3P18627 525 aa20.17■□□□□ 0.82
SIN3A-212ENST00000568919 KCNA5P22460 613 aa20.17■□□□□ 0.82
SIN3A-212ENST00000568919 IRS1P35568 1242 aa20.17■□□□□ 0.82
SIN3A-212ENST00000568919 HYAL1Q12794 435 aa20.17■□□□□ 0.82
SIN3A-212ENST00000568919 TFDP1Q14186 410 aa20.17■□□□□ 0.82
SIN3A-212ENST00000568919 ECM1Q16610 540 aa20.17■□□□□ 0.82
SIN3A-212ENST00000568919 LONRF3Q496Y0 759 aa20.17■□□□□ 0.82
SIN3A-212ENST00000568919 POTEGQ6S5H5 508 aa20.17■□□□□ 0.82
SIN3A-212ENST00000568919 MAEAQ7L5Y9 396 aa20.17■□□□□ 0.82
SIN3A-212ENST00000568919 IFNLR1Q8IU57 520 aaPredicted RBP20.17■□□□□ 0.82
SIN3A-212ENST00000568919 LPPQ93052 612 aa20.17■□□□□ 0.82
SIN3A-212ENST00000568919 UHRF1Q96T88 793 aaPredicted RBP20.17■□□□□ 0.82
SIN3A-212ENST00000568919 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.17■□□□□ 0.82
SIN3A-212ENST00000568919 LRWD1Q9UFC0 647 aa20.17■□□□□ 0.82
SIN3A-212ENST00000568919 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.17■□□□□ 0.82
SIN3A-212ENST00000568919 PLXNA4Q9HCM2 1894 aa20.16■□□□□ 0.82
SIN3A-212ENST00000568919 NCK2O43639 380 aa20.16■□□□□ 0.82
SIN3A-212ENST00000568919 USO1O60763 962 aaKnown RBP20.16■□□□□ 0.82
SIN3A-212ENST00000568919 MUTP22033 750 aa20.16■□□□□ 0.82
SIN3A-212ENST00000568919 GLRA2P23416 452 aa20.16■□□□□ 0.82
SIN3A-212ENST00000568919 CCT6AP40227 531 aaKnown RBP20.16■□□□□ 0.82
SIN3A-212ENST00000568919 RAB27AP51159 221 aa20.16■□□□□ 0.82
SIN3A-212ENST00000568919 UBE3AQ05086 875 aa20.16■□□□□ 0.82
SIN3A-212ENST00000568919 CAPSQ13938 189 aa20.16■□□□□ 0.82
SIN3A-212ENST00000568919 IL17AQ16552 155 aa20.16■□□□□ 0.82
SIN3A-212ENST00000568919 CSPP1Q1MSJ5 1256 aa20.16■□□□□ 0.82
SIN3A-212ENST00000568919 LEXMQ3ZCV2 418 aa20.16■□□□□ 0.82
SIN3A-212ENST00000568919 KCNT2Q6UVM3 1135 aa20.16■□□□□ 0.82
SIN3A-212ENST00000568919 MRPL10Q7Z7H8 261 aaKnown RBP20.16■□□□□ 0.82
SIN3A-212ENST00000568919 THNSL1Q8IYQ7 743 aa20.16■□□□□ 0.82
SIN3A-212ENST00000568919 LRRC43Q8N309 656 aa20.16■□□□□ 0.82
SIN3A-212ENST00000568919 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.16■□□□□ 0.82
SIN3A-212ENST00000568919 NECAB3Q96P71 396 aaPredicted RBP20.16■□□□□ 0.82
SIN3A-212ENST00000568919 POLR3FQ9H1D9 316 aaPredicted RBP20.16■□□□□ 0.82
SIN3A-212ENST00000568919 IGFLR1Q9H665 355 aa20.16■□□□□ 0.82
SIN3A-212ENST00000568919 PCDHB2Q9Y5E7 798 aa20.16■□□□□ 0.82
SIN3A-212ENST00000568919 MEIS3P2A8K0S8 358 aa20.15■□□□□ 0.82
SIN3A-212ENST00000568919 TNFRSF10AO00220 468 aa20.15■□□□□ 0.82
SIN3A-212ENST00000568919 LAD1O00515 517 aa20.15■□□□□ 0.82
SIN3A-212ENST00000568919 GTF2F1P35269 517 aaKnown RBP eCLIP20.15■□□□□ 0.821e-7■■■■■ 32.5
SIN3A-212ENST00000568919 CTC1Q2NKJ3 1217 aa20.15■□□□□ 0.82
SIN3A-212ENST00000568919 RILPL1Q5EBL4 403 aa20.15■□□□□ 0.82
SIN3A-212ENST00000568919 UBXN11Q5T124 520 aa20.15■□□□□ 0.82
SIN3A-212ENST00000568919 LARP1BQ659C4 914 aaKnown RBP20.15■□□□□ 0.82
SIN3A-212ENST00000568919 HAUS3Q68CZ6 603 aa20.15■□□□□ 0.82
SIN3A-212ENST00000568919 EP400NLQ6ZTU2 488 aa20.15■□□□□ 0.82
SIN3A-212ENST00000568919 IGSF22Q8N9C0 903 aa20.15■□□□□ 0.82
SIN3A-212ENST00000568919 ZNF558Q96NG5 402 aa20.15■□□□□ 0.82
SIN3A-212ENST00000568919 GPRC5CQ9NQ84 441 aa20.15■□□□□ 0.82
SIN3A-212ENST00000568919 CLDND1Q9NY35 253 aa20.15■□□□□ 0.82
SIN3A-212ENST00000568919 INO80B-WBP1J3KQ70 363 aa20.14■□□□□ 0.81
SIN3A-212ENST00000568919 OFD1O75665 1012 aa20.14■□□□□ 0.81
SIN3A-212ENST00000568919 AXLP30530 894 aa20.14■□□□□ 0.81
SIN3A-212ENST00000568919 LTBRP36941 435 aa20.14■□□□□ 0.81
SIN3A-212ENST00000568919 PRPHP41219 470 aa20.14■□□□□ 0.81
SIN3A-212ENST00000568919 ERVFC1P60507 584 aa20.14■□□□□ 0.81
SIN3A-212ENST00000568919 PLCB3Q01970 1234 aa20.14■□□□□ 0.81
SIN3A-212ENST00000568919 PCBP1Q15365 356 aaKnown RBP eCLIP20.14■□□□□ 0.818e-6■■■■■ 32.8
SIN3A-212ENST00000568919 PADI6Q6TGC4 694 aa20.14■□□□□ 0.81
SIN3A-212ENST00000568919 ADGRD2Q7Z7M1 963 aa20.14■□□□□ 0.81
SIN3A-212ENST00000568919 MCPH1Q8NEM0 835 aa20.14■□□□□ 0.81
SIN3A-212ENST00000568919 MICAL1Q8TDZ2 1067 aa20.14■□□□□ 0.81
SIN3A-212ENST00000568919 PGBD4Q96DM1 585 aa20.14■□□□□ 0.81
SIN3A-212ENST00000568919 MRPL9Q9BYD2 267 aaKnown RBP20.14■□□□□ 0.81
SIN3A-212ENST00000568919 NFKBIZQ9BYH8 718 aa20.14■□□□□ 0.81
SIN3A-212ENST00000568919 KIAA1024Q9UPX6 916 aa20.14■□□□□ 0.81
SIN3A-212ENST00000568919 PCDHGC5Q9Y5F6 944 aa20.14■□□□□ 0.81
SIN3A-212ENST00000568919 ARHGEF35A5YM69 484 aa20.13■□□□□ 0.81
SIN3A-212ENST00000568919 H3BQ06 376 aaPredicted RBP20.13■□□□□ 0.81
SIN3A-212ENST00000568919 TSPAN1O60635 241 aa20.13■□□□□ 0.81
SIN3A-212ENST00000568919 ERLIN2O94905 339 aa20.13■□□□□ 0.81
SIN3A-212ENST00000568919 CYP11B2P19099 503 aa20.13■□□□□ 0.81
SIN3A-212ENST00000568919 PBX3P40426 434 aa20.13■□□□□ 0.81
SIN3A-212ENST00000568919 MBTD1Q05BQ5 628 aa20.13■□□□□ 0.81
SIN3A-212ENST00000568919 NCBP1Q09161 790 aaKnown RBP20.13■□□□□ 0.81
SIN3A-212ENST00000568919 ADAM15Q13444 863 aa20.13■□□□□ 0.81
SIN3A-212ENST00000568919 CUL4AQ13619 759 aa20.13■□□□□ 0.81
SIN3A-212ENST00000568919 AMHR2Q16671 573 aa20.13■□□□□ 0.81
SIN3A-212ENST00000568919 GLB1LQ6UWU2 654 aa20.13■□□□□ 0.81
SIN3A-212ENST00000568919 DTHD1Q6ZMT9 781 aa20.13■□□□□ 0.81
SIN3A-212ENST00000568919 AGMOQ6ZNB7 445 aa20.13■□□□□ 0.81
SIN3A-212ENST00000568919 RSPH1Q8WYR4 309 aa20.13■□□□□ 0.81
SIN3A-212ENST00000568919 MRPS27Q92552 414 aaKnown RBP20.13■□□□□ 0.81
SIN3A-212ENST00000568919 CPB2Q96IY4 423 aa20.13■□□□□ 0.81
SIN3A-212ENST00000568919 RAB34Q9BZG1 259 aa20.13■□□□□ 0.81
SIN3A-212ENST00000568919 TLR9Q9NR96 1032 aa20.13■□□□□ 0.81
SIN3A-212ENST00000568919 SPG21Q9NZD8 308 aa20.13■□□□□ 0.81
SIN3A-212ENST00000568919 PUF60Q9UHX1 559 aaKnown RBP20.13■□□□□ 0.81
SIN3A-212ENST00000568919 LZTS1Q9Y250 596 aa20.13■□□□□ 0.81
SIN3A-212ENST00000568919 STK24Q9Y6E0 443 aa20.13■□□□□ 0.81
SIN3A-212ENST00000568919 NOMO2Q5JPE7 1267 aa20.12■□□□□ 0.81
SIN3A-212ENST00000568919 RBM23Q86U06 439 aaKnown RBP20.12■□□□□ 0.81
SIN3A-212ENST00000568919 PPP2R3CQ969Q6 453 aa20.12■□□□□ 0.81
SIN3A-212ENST00000568919 TTC28Q96AY4 2481 aa20.12■□□□□ 0.81
SIN3A-212ENST00000568919 PP2D1A8MPX8 630 aa20.11■□□□□ 0.81
SIN3A-212ENST00000568919 NT5C1B-RDH14C9J2C7 533 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms