RNA–Protein interactions for RNA: ENST00000568477.5

CMTM3-215, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-215ENST00000568477 TUFT1Q9NNX1 390 aa16.08■□□□□ 0.16
CMTM3-215ENST00000568477 TLR9Q9NR96 1032 aa16.08■□□□□ 0.16
CMTM3-215ENST00000568477 FAM105AQ9NUU6 356 aa16.08■□□□□ 0.16
CMTM3-215ENST00000568477 FAM50BQ9Y247 325 aa16.08■□□□□ 0.16
CMTM3-215ENST00000568477 GRXCR2A6NFK2 248 aa16.07■□□□□ 0.16
CMTM3-215ENST00000568477 XRCC6P12956 609 aaKnown RBP eCLIP16.07■□□□□ 0.16
CMTM3-215ENST00000568477 RARRES1P49788 294 aa16.07■□□□□ 0.16
CMTM3-215ENST00000568477 TFDP1Q14186 410 aa16.07■□□□□ 0.16
CMTM3-215ENST00000568477 KCNT2Q6UVM3 1135 aa16.07■□□□□ 0.16
CMTM3-215ENST00000568477 GLB1LQ6UWU2 654 aa16.07■□□□□ 0.16
CMTM3-215ENST00000568477 ADGRD2Q7Z7M1 963 aa16.07■□□□□ 0.16
CMTM3-215ENST00000568477 ERMNQ8TAM6 284 aa16.07■□□□□ 0.16
CMTM3-215ENST00000568477 MICAL1Q8TDZ2 1067 aa16.07■□□□□ 0.16
CMTM3-215ENST00000568477 PIGOQ8TEQ8 1089 aa16.07■□□□□ 0.16
CMTM3-215ENST00000568477 MINDY3Q9H8M7 445 aa16.07■□□□□ 0.16
CMTM3-215ENST00000568477 PUF60Q9UHX1 559 aaKnown RBP16.07■□□□□ 0.16
CMTM3-215ENST00000568477 LZTS1Q9Y250 596 aa16.07■□□□□ 0.16
CMTM3-215ENST00000568477 MUC3AQ02505 3323 aa16.06■□□□□ 0.16
CMTM3-215ENST00000568477 PLXNA4Q9HCM2 1894 aa16.06■□□□□ 0.16
CMTM3-215ENST00000568477 ZNF623O75123 536 aa16.06■□□□□ 0.16
CMTM3-215ENST00000568477 ERLIN2O94905 339 aa16.06■□□□□ 0.16
CMTM3-215ENST00000568477 SPATA31C1P0DKV0 1188 aa16.06■□□□□ 0.16
CMTM3-215ENST00000568477 IL9P15248 144 aa16.06■□□□□ 0.16
CMTM3-215ENST00000568477 U2AF2P26368 475 aaKnown RBP eCLIP16.06■□□□□ 0.16
CMTM3-215ENST00000568477 GTF2F1P35269 517 aaKnown RBP eCLIP16.06■□□□□ 0.16
CMTM3-215ENST00000568477 LTBRP36941 435 aa16.06■□□□□ 0.16
CMTM3-215ENST00000568477 TECP42680 631 aa16.06■□□□□ 0.16
CMTM3-215ENST00000568477 NRIP1P48552 1158 aa16.06■□□□□ 0.16
CMTM3-215ENST00000568477 PLCB3Q01970 1234 aa16.06■□□□□ 0.16
CMTM3-215ENST00000568477 PDE12Q6L8Q7 609 aaKnown RBP16.06■□□□□ 0.16
CMTM3-215ENST00000568477 CATSPER3Q86XQ3 398 aa16.06■□□□□ 0.16
CMTM3-215ENST00000568477 MRPS27Q92552 414 aaKnown RBP16.06■□□□□ 0.16
CMTM3-215ENST00000568477 LPPQ93052 612 aa16.06■□□□□ 0.16
CMTM3-215ENST00000568477 PGBD4Q96DM1 585 aa16.06■□□□□ 0.16
CMTM3-215ENST00000568477 POLR3CQ9BUI4 534 aaPredicted RBP16.06■□□□□ 0.16
CMTM3-215ENST00000568477 SPG21Q9NZD8 308 aa16.06■□□□□ 0.16
CMTM3-215ENST00000568477 PCDHGC5Q9Y5F6 944 aa16.06■□□□□ 0.16
CMTM3-215ENST00000568477 LINC01565O15544 149 aa16.05■□□□□ 0.16
CMTM3-215ENST00000568477 USO1O60763 962 aaKnown RBP16.05■□□□□ 0.16
CMTM3-215ENST00000568477 TBX10O75333 385 aa16.05■□□□□ 0.16
CMTM3-215ENST00000568477 MED24O75448 989 aa16.05■□□□□ 0.16
CMTM3-215ENST00000568477 PBX3P40426 434 aa16.05■□□□□ 0.16
CMTM3-215ENST00000568477 NDUFV1P49821 464 aa16.05■□□□□ 0.16
CMTM3-215ENST00000568477 PTENP60484 403 aa16.05■□□□□ 0.16
CMTM3-215ENST00000568477 KRT17Q04695 432 aa16.05■□□□□ 0.16
CMTM3-215ENST00000568477 ADAM15Q13444 863 aa16.05■□□□□ 0.16
CMTM3-215ENST00000568477 PCBP1Q15365 356 aaKnown RBP eCLIP16.05■□□□□ 0.16
CMTM3-215ENST00000568477 LONRF3Q496Y0 759 aa16.05■□□□□ 0.16
CMTM3-215ENST00000568477 RBM23Q86U06 439 aaKnown RBP16.05■□□□□ 0.16
CMTM3-215ENST00000568477 FAM178BQ8IXR5 827 aa16.05■□□□□ 0.16
CMTM3-215ENST00000568477 EFHBQ8N7U6 833 aa16.05■□□□□ 0.16
CMTM3-215ENST00000568477 ASAP3Q8TDY4 903 aa16.05■□□□□ 0.16
CMTM3-215ENST00000568477 TMX3Q96JJ7 454 aa16.05■□□□□ 0.16
CMTM3-215ENST00000568477 NACC1Q96RE7 527 aa16.05■□□□□ 0.16
CMTM3-215ENST00000568477 POLR3FQ9H1D9 316 aaPredicted RBP16.05■□□□□ 0.16
CMTM3-215ENST00000568477 TLE6Q9H808 572 aa16.05■□□□□ 0.16
CMTM3-215ENST00000568477 DBR1Q9UK59 544 aaKnown RBP16.05■□□□□ 0.16
CMTM3-215ENST00000568477 INPP5FQ9Y2H2 1132 aa16.05■□□□□ 0.16
CMTM3-215ENST00000568477 PCDHB2Q9Y5E7 798 aa16.05■□□□□ 0.16
CMTM3-215ENST00000568477 A0A087WWV3 80 aa16.04■□□□□ 0.16
CMTM3-215ENST00000568477 FSD2A1L4K1 749 aa16.04■□□□□ 0.16
CMTM3-215ENST00000568477 INO80B-WBP1J3KQ70 363 aa16.04■□□□□ 0.16
CMTM3-215ENST00000568477 FSCN2O14926 492 aa16.04■□□□□ 0.16
CMTM3-215ENST00000568477 RPA1P27694 616 aa16.04■□□□□ 0.16
CMTM3-215ENST00000568477 HOXA11P31270 313 aaPredicted RBP16.04■□□□□ 0.16
CMTM3-215ENST00000568477 ARL2P36404 184 aa16.04■□□□□ 0.16
CMTM3-215ENST00000568477 ALDH7A1P49419 539 aaKnown RBP16.04■□□□□ 0.16
CMTM3-215ENST00000568477 MCM2P49736 904 aa16.04■□□□□ 0.16
CMTM3-215ENST00000568477 ERVFC1P60507 584 aa16.04■□□□□ 0.16
CMTM3-215ENST00000568477 POU5F1BQ06416 359 aa16.04■□□□□ 0.16
CMTM3-215ENST00000568477 DLX2Q07687 328 aaPredicted RBP16.04■□□□□ 0.16
CMTM3-215ENST00000568477 NCBP1Q09161 790 aaKnown RBP16.04■□□□□ 0.16
CMTM3-215ENST00000568477 CAPSQ13938 189 aa16.04■□□□□ 0.16
CMTM3-215ENST00000568477 NBR1Q14596 966 aa16.04■□□□□ 0.16
CMTM3-215ENST00000568477 CLUL1Q15846 466 aa16.04■□□□□ 0.16
CMTM3-215ENST00000568477 NOMO2Q5JPE7 1267 aa16.04■□□□□ 0.16
CMTM3-215ENST00000568477 HAUS3Q68CZ6 603 aa16.04■□□□□ 0.16
CMTM3-215ENST00000568477 POTEGQ6S5H5 508 aa16.04■□□□□ 0.16
CMTM3-215ENST00000568477 IFNLR1Q8IU57 520 aaPredicted RBP16.04■□□□□ 0.16
CMTM3-215ENST00000568477 SLC39A11Q8N1S5 342 aa16.04■□□□□ 0.16
CMTM3-215ENST00000568477 MCPH1Q8NEM0 835 aa16.04■□□□□ 0.16
CMTM3-215ENST00000568477 CCDC51Q96ER9 411 aa16.04■□□□□ 0.16
CMTM3-215ENST00000568477 ENTPD7Q9NQZ7 604 aa16.04■□□□□ 0.16
CMTM3-215ENST00000568477 CD207Q9UJ71 328 aa16.04■□□□□ 0.16
CMTM3-215ENST00000568477 CNTNAP2Q9UHC6 1331 aa16.03■□□□□ 0.16
CMTM3-215ENST00000568477 CARNS1A5YM72 827 aa16.03■□□□□ 0.16
CMTM3-215ENST00000568477 MEIS3P2A8K0S8 358 aa16.03■□□□□ 0.16
CMTM3-215ENST00000568477 TSPAN1O60635 241 aa16.03■□□□□ 0.16
CMTM3-215ENST00000568477 ZC3H11AO75152 810 aaKnown RBP eCLIP16.03■□□□□ 0.16
CMTM3-215ENST00000568477 GLRA2P23416 452 aa16.03■□□□□ 0.16
CMTM3-215ENST00000568477 AXLP30530 894 aa16.03■□□□□ 0.16
CMTM3-215ENST00000568477 FXR2P51116 673 aaKnown RBP eCLIP16.03■□□□□ 0.16
CMTM3-215ENST00000568477 BCAR1P56945 870 aa16.03■□□□□ 0.16
CMTM3-215ENST00000568477 RNASELQ05823 741 aaKnown RBP16.03■□□□□ 0.16
CMTM3-215ENST00000568477 UBXN11Q5T124 520 aa16.03■□□□□ 0.16
CMTM3-215ENST00000568477 PLPP4Q5VZY2 271 aa16.03■□□□□ 0.16
CMTM3-215ENST00000568477 MCTP1Q6DN14 999 aa16.03■□□□□ 0.16
CMTM3-215ENST00000568477 MRPL10Q7Z7H8 261 aaKnown RBP16.03■□□□□ 0.16
CMTM3-215ENST00000568477 URGCPQ8TCY9 931 aa16.03■□□□□ 0.16
CMTM3-215ENST00000568477 TBC1D32Q96NH3 1257 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms