RNA–Protein interactions for RNA: ENST00000568294.5

HDGFL3-206, Transcript of HDGF like 3, humanhuman

TSL 4

Gene HDGFL3, Length 3,397 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-206ENST00000568294 SNHG28P0DPA3 235 aa9.68□□□□□ -0.86
HDGFL3-206ENST00000568294 ZNF713Q8N859 430 aaPredicted RBP9.68□□□□□ -0.86
HDGFL3-206ENST00000568294 NEK9Q8TD19 979 aa9.68□□□□□ -0.86
HDGFL3-206ENST00000568294 RFFLQ8WZ73 363 aa9.68□□□□□ -0.86
HDGFL3-206ENST00000568294 ZNF653Q96CK0 615 aa9.68□□□□□ -0.86
HDGFL3-206ENST00000568294 HVCN1Q96D96 273 aa9.68□□□□□ -0.86
HDGFL3-206ENST00000568294 OSBPL7Q9BZF2 842 aa9.68□□□□□ -0.86
HDGFL3-206ENST00000568294 AGPAT3Q9NRZ7 376 aa9.68□□□□□ -0.86
HDGFL3-206ENST00000568294 INTS9Q9NV88 658 aaKnown RBP9.68□□□□□ -0.86
HDGFL3-206ENST00000568294 PRR12Q9ULL5 1215 aa9.68□□□□□ -0.86
HDGFL3-206ENST00000568294 ATF5Q9Y2D1 282 aaPredicted RBP9.68□□□□□ -0.86
HDGFL3-206ENST00000568294 NHSL1Q5SYE7 1610 aa9.68□□□□□ -0.86
HDGFL3-206ENST00000568294 GAKO14976 1311 aa9.68□□□□□ -0.86
HDGFL3-206ENST00000568294 SLC16A4O15374 487 aa9.67□□□□□ -0.86
HDGFL3-206ENST00000568294 CLDN3O15551 220 aa9.67□□□□□ -0.86
HDGFL3-206ENST00000568294 BBOX1O75936 387 aa9.67□□□□□ -0.86
HDGFL3-206ENST00000568294 SEL1L2Q5TEA6 688 aa9.67□□□□□ -0.86
HDGFL3-206ENST00000568294 PLA2G4FQ68DD2 849 aa9.67□□□□□ -0.86
HDGFL3-206ENST00000568294 ZNF572Q7Z3I7 529 aaPredicted RBP9.67□□□□□ -0.86
HDGFL3-206ENST00000568294 LRRC34Q8IZ02 419 aa9.67□□□□□ -0.86
HDGFL3-206ENST00000568294 SYN2Q92777 582 aaPredicted RBP9.67□□□□□ -0.86
HDGFL3-206ENST00000568294 TRIM7Q9C029 511 aa9.67□□□□□ -0.86
HDGFL3-206ENST00000568294 METTL14Q9HCE5 456 aaKnown RBP9.67□□□□□ -0.86
HDGFL3-206ENST00000568294 SLITRK3O94933 977 aa9.67□□□□□ -0.86
HDGFL3-206ENST00000568294 SPIRE1Q08AE8 756 aa9.67□□□□□ -0.86
HDGFL3-206ENST00000568294 RRP1BQ14684 758 aaKnown RBP9.67□□□□□ -0.86
HDGFL3-206ENST00000568294 AOC3Q16853 763 aa9.67□□□□□ -0.86
HDGFL3-206ENST00000568294 GRIPAP1Q4V328 841 aa9.67□□□□□ -0.86
HDGFL3-206ENST00000568294 FAM102BQ5T8I3 360 aa9.67□□□□□ -0.86
HDGFL3-206ENST00000568294 CYP4F22Q6NT55 531 aa9.67□□□□□ -0.86
HDGFL3-206ENST00000568294 CCDC137Q6PK04 289 aaKnown RBP9.67□□□□□ -0.86
HDGFL3-206ENST00000568294 BARGINQ6ZT62 677 aa9.67□□□□□ -0.86
HDGFL3-206ENST00000568294 SH3BP5LQ7L8J4 393 aa9.67□□□□□ -0.86
HDGFL3-206ENST00000568294 ACTRT1Q8TDG2 376 aa9.67□□□□□ -0.86
HDGFL3-206ENST00000568294 LENG9Q96B70 501 aa9.67□□□□□ -0.86
HDGFL3-206ENST00000568294 GLIS2Q9BZE0 524 aaPredicted RBP9.67□□□□□ -0.86
HDGFL3-206ENST00000568294 SWAP70Q9UH65 585 aa9.67□□□□□ -0.86
HDGFL3-206ENST00000568294 BZW2Q9Y6E2 419 aaKnown RBP9.67□□□□□ -0.86
HDGFL3-206ENST00000568294 MYO3BQ8WXR4 1341 aa9.67□□□□□ -0.86
HDGFL3-206ENST00000568294 PHLPP1O60346 1717 aa9.67□□□□□ -0.86
HDGFL3-206ENST00000568294 GJB6O95452 261 aa9.67□□□□□ -0.86
HDGFL3-206ENST00000568294 LMNB1P20700 586 aa9.67□□□□□ -0.86
HDGFL3-206ENST00000568294 CHRNA5P30532 468 aa9.67□□□□□ -0.86
HDGFL3-206ENST00000568294 RPL21P46778 160 aaKnown RBP9.67□□□□□ -0.86
HDGFL3-206ENST00000568294 PEX3P56589 373 aa9.67□□□□□ -0.86
HDGFL3-206ENST00000568294 COBLL1Q53SF7 1204 aa9.67□□□□□ -0.86
HDGFL3-206ENST00000568294 KAZNQ674X7 775 aa9.67□□□□□ -0.86
HDGFL3-206ENST00000568294 PPP4R3CPQ6ZMV5 832 aa9.67□□□□□ -0.86
HDGFL3-206ENST00000568294 FAM47EQ6ZV65 393 aa9.67□□□□□ -0.86
HDGFL3-206ENST00000568294 SLC47A2Q86VL8 602 aa9.67□□□□□ -0.86
HDGFL3-206ENST00000568294 HAUS1Q96CS2 278 aa9.67□□□□□ -0.86
HDGFL3-206ENST00000568294 FAM212AQ96EL1 285 aa9.67□□□□□ -0.86
HDGFL3-206ENST00000568294 RAB17Q9H0T7 212 aa9.67□□□□□ -0.86
HDGFL3-206ENST00000568294 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.67□□□□□ -0.86
HDGFL3-206ENST00000568294 SCN7AQ01118 1682 aa9.66□□□□□ -0.86
HDGFL3-206ENST00000568294 RAD17O75943 681 aa9.66□□□□□ -0.86
HDGFL3-206ENST00000568294 EYA4O95677 639 aa9.66□□□□□ -0.86
HDGFL3-206ENST00000568294 PYGMP11217 842 aa9.66□□□□□ -0.86
HDGFL3-206ENST00000568294 EIF2AK2P19525 551 aaKnown RBP9.66□□□□□ -0.86
HDGFL3-206ENST00000568294 NPEPPSP55786 919 aa9.66□□□□□ -0.86
HDGFL3-206ENST00000568294 KIAA1755Q5JYT7 1200 aa9.66□□□□□ -0.86
HDGFL3-206ENST00000568294 RC3H1Q5TC82 1133 aaKnown RBP9.66□□□□□ -0.86
HDGFL3-206ENST00000568294 RNF25Q96BH1 459 aaPredicted RBP9.66□□□□□ -0.86
HDGFL3-206ENST00000568294 COA1Q9GZY4 146 aa9.66□□□□□ -0.86
HDGFL3-206ENST00000568294 UNC45AQ9H3U1 944 aa9.66□□□□□ -0.86
HDGFL3-206ENST00000568294 PI4KBQ9UBF8 816 aa9.66□□□□□ -0.86
HDGFL3-206ENST00000568294 APEX2Q9UBZ4 518 aa9.66□□□□□ -0.86
HDGFL3-206ENST00000568294 FAM198AQ9UFP1 575 aa9.66□□□□□ -0.86
HDGFL3-206ENST00000568294 TRAF3IP3Q9Y228 551 aa9.66□□□□□ -0.86
HDGFL3-206ENST00000568294 KIAA1551Q9HCM1 1747 aa9.66□□□□□ -0.86
HDGFL3-206ENST00000568294 BRD2P25440 801 aaKnown RBP9.66□□□□□ -0.86
HDGFL3-206ENST00000568294 PPP3CAQ08209 521 aa9.66□□□□□ -0.86
HDGFL3-206ENST00000568294 MTMR3Q13615 1198 aa9.66□□□□□ -0.86
HDGFL3-206ENST00000568294 TTC27Q6P3X3 843 aa9.66□□□□□ -0.86
HDGFL3-206ENST00000568294 ACSF2Q96CM8 615 aaPredicted RBP9.66□□□□□ -0.86
HDGFL3-206ENST00000568294 XPO6Q96QU8 1125 aaKnown RBP9.66□□□□□ -0.86
HDGFL3-206ENST00000568294 AGPAT1Q99943 283 aa9.66□□□□□ -0.86
HDGFL3-206ENST00000568294 SAMD15Q9P1V8 674 aa9.66□□□□□ -0.86
HDGFL3-206ENST00000568294 ZBTB12Q9Y330 459 aaPredicted RBP9.66□□□□□ -0.86
HDGFL3-206ENST00000568294 XIRP1Q702N8 1843 aaKnown RBP9.66□□□□□ -0.86
HDGFL3-206ENST00000568294 IGKV6D-41A0A0C4DH26 115 aa9.66□□□□□ -0.86
HDGFL3-206ENST00000568294 H0YGN5 161 aa9.66□□□□□ -0.86
HDGFL3-206ENST00000568294 CCDC188H7C350 402 aa9.66□□□□□ -0.86
HDGFL3-206ENST00000568294 ALAS1P13196 640 aa9.66□□□□□ -0.86
HDGFL3-206ENST00000568294 MIER3Q7Z3K6 550 aa9.66□□□□□ -0.86
HDGFL3-206ENST00000568294 SIAH1Q8IUQ4 282 aa9.66□□□□□ -0.86
HDGFL3-206ENST00000568294 N4BP2L2Q92802 583 aaPredicted RBP9.66□□□□□ -0.86
HDGFL3-206ENST00000568294 BICD1Q96G01 975 aa9.66□□□□□ -0.86
HDGFL3-206ENST00000568294 AGBL1Q96MI9 1066 aa9.66□□□□□ -0.86
HDGFL3-206ENST00000568294 ERP44Q9BS26 406 aa9.66□□□□□ -0.86
HDGFL3-206ENST00000568294 NUP85Q9BW27 656 aa9.66□□□□□ -0.86
HDGFL3-206ENST00000568294 FAM114A2Q9NRY5 505 aa9.66□□□□□ -0.86
HDGFL3-206ENST00000568294 SUCLA2Q9P2R7 463 aaPredicted RBP9.66□□□□□ -0.86
HDGFL3-206ENST00000568294 RASAL2Q9UJF2 1139 aa9.66□□□□□ -0.86
HDGFL3-206ENST00000568294 VAV3Q9UKW4 847 aa9.66□□□□□ -0.86
HDGFL3-206ENST00000568294 TTC7AQ9ULT0 858 aaPredicted RBP9.66□□□□□ -0.86
HDGFL3-206ENST00000568294 NFS1Q9Y697 457 aa9.66□□□□□ -0.86
HDGFL3-206ENST00000568294 ABCA3Q99758 1704 aa9.65□□□□□ -0.86
HDGFL3-206ENST00000568294 TRAPPC3O43617 180 aa9.65□□□□□ -0.86
HDGFL3-206ENST00000568294 MMP10P09238 476 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms