RNA–Protein interactions for RNA: ENST00000568038.1

SMG1-214, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-214ENST00000568038 DDX25Q9UHL0 483 aaKnown RBP8.75□□□□□ -1.01
SMG1-214ENST00000568038 SALL4Q9UJQ4 1053 aa8.75□□□□□ -1.01
SMG1-214ENST00000568038 ATP6V1DQ9Y5K8 247 aa8.75□□□□□ -1.01
SMG1-214ENST00000568038 UBIAD1Q9Y5Z9 338 aa8.75□□□□□ -1.01
SMG1-214ENST00000568038 CLIC4Q9Y696 253 aa8.75□□□□□ -1.01
SMG1-214ENST00000568038 PLXNA1Q9UIW2 1896 aa8.74□□□□□ -1.01
SMG1-214ENST00000568038 CASP8AP2Q9UKL3 1982 aa8.74□□□□□ -1.01
SMG1-214ENST00000568038 DDX3YO15523 660 aaKnown RBP8.74□□□□□ -1.01
SMG1-214ENST00000568038 SLC37A4O43826 429 aa8.74□□□□□ -1.01
SMG1-214ENST00000568038 ADCY3O60266 1144 aa8.74□□□□□ -1.01
SMG1-214ENST00000568038 MARCH6O60337 910 aa8.74□□□□□ -1.01
SMG1-214ENST00000568038 NEMFO60524 1076 aa8.74□□□□□ -1.01
SMG1-214ENST00000568038 EIF3JO75822 258 aaKnown RBP8.74□□□□□ -1.01
SMG1-214ENST00000568038 SNAI1O95863 264 aaPredicted RBP8.74□□□□□ -1.01
SMG1-214ENST00000568038 ARP10275 920 aa8.74□□□□□ -1.01
SMG1-214ENST00000568038 GCFC2P16383 781 aaKnown RBP8.74□□□□□ -1.01
SMG1-214ENST00000568038 EDNRBP24530 442 aa8.74□□□□□ -1.01
SMG1-214ENST00000568038 CIITAP33076 1130 aa8.74□□□□□ -1.01
SMG1-214ENST00000568038 CYP2C19P33261 490 aa8.74□□□□□ -1.01
SMG1-214ENST00000568038 SF3A1Q15459 793 aaKnown RBP8.74□□□□□ -1.01
SMG1-214ENST00000568038 CEP55Q53EZ4 464 aa8.74□□□□□ -1.01
SMG1-214ENST00000568038 PRAMEF19Q5SWL8 479 aa8.74□□□□□ -1.01
SMG1-214ENST00000568038 ANO1Q5XXA6 986 aa8.74□□□□□ -1.01
SMG1-214ENST00000568038 OLFML2BQ68BL8 750 aa8.74□□□□□ -1.01
SMG1-214ENST00000568038 PPP4R3AQ6IN85 833 aa8.74□□□□□ -1.01
SMG1-214ENST00000568038 ALKBH2Q6NS38 261 aa8.74□□□□□ -1.01
SMG1-214ENST00000568038 XRRA1Q6P2D8 792 aa8.74□□□□□ -1.01
SMG1-214ENST00000568038 MOXD1Q6UVY6 613 aa8.74□□□□□ -1.01
SMG1-214ENST00000568038 XKR5Q6UX68 686 aa8.74□□□□□ -1.01
SMG1-214ENST00000568038 MAMDC4Q6UXC1 1216 aa8.74□□□□□ -1.01
SMG1-214ENST00000568038 NLRX1Q86UT6 975 aa8.74□□□□□ -1.01
SMG1-214ENST00000568038 FBXO16Q8IX29 292 aaPredicted RBP8.74□□□□□ -1.01
SMG1-214ENST00000568038 MORC4Q8TE76 937 aa8.74□□□□□ -1.01
SMG1-214ENST00000568038 TRIB2Q92519 343 aa8.74□□□□□ -1.01
SMG1-214ENST00000568038 USP28Q96RU2 1077 aa8.74□□□□□ -1.01
SMG1-214ENST00000568038 TINF2Q9BSI4 451 aa8.74□□□□□ -1.01
SMG1-214ENST00000568038 TMEM60Q9H2L4 133 aa8.74□□□□□ -1.01
SMG1-214ENST00000568038 JADE2Q9NQC1 790 aa8.74□□□□□ -1.01
SMG1-214ENST00000568038 CNPY2Q9Y2B0 182 aa8.74□□□□□ -1.01
SMG1-214ENST00000568038 MRVI1Q9Y6F6 885 aa8.74□□□□□ -1.01
SMG1-214ENST00000568038 ZNF236Q9UL36 1845 aa8.74□□□□□ -1.01
SMG1-214ENST00000568038 MCM3APO60318 1980 aa8.73□□□□□ -1.01
SMG1-214ENST00000568038 IGLV3-22A0A075B6J6 115 aa8.73□□□□□ -1.01
SMG1-214ENST00000568038 CYP3A7-CYP3A51PA0A087WV96 503 aa8.73□□□□□ -1.01
SMG1-214ENST00000568038 LOC102724159A0A0B4J2E5 919 aa8.73□□□□□ -1.01
SMG1-214ENST00000568038 MEIS1O00470 390 aa8.73□□□□□ -1.01
SMG1-214ENST00000568038 STAM2O75886 525 aa8.73□□□□□ -1.01
SMG1-214ENST00000568038 CYP3A7P24462 503 aa8.73□□□□□ -1.01
SMG1-214ENST00000568038 PRMT2P55345 433 aa8.73□□□□□ -1.01
SMG1-214ENST00000568038 KRT85P78386 507 aa8.73□□□□□ -1.01
SMG1-214ENST00000568038 MTMR1Q13613 665 aa8.73□□□□□ -1.01
SMG1-214ENST00000568038 STK38Q15208 465 aa8.73□□□□□ -1.01
SMG1-214ENST00000568038 PWP2Q15269 919 aaKnown RBP8.73□□□□□ -1.01
SMG1-214ENST00000568038 CALCRLQ16602 461 aa8.73□□□□□ -1.01
SMG1-214ENST00000568038 DUOXA2Q1HG44 320 aa8.73□□□□□ -1.01
SMG1-214ENST00000568038 GNPTABQ3T906 1256 aa8.73□□□□□ -1.01
SMG1-214ENST00000568038 Q4G0T1 1027 aa8.73□□□□□ -1.01
SMG1-214ENST00000568038 MFSD14CQ5VZR4 134 aa8.73□□□□□ -1.01
SMG1-214ENST00000568038 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.73□□□□□ -1.01
SMG1-214ENST00000568038 MSL3Q8N5Y2 521 aaKnown RBP8.73□□□□□ -1.01
SMG1-214ENST00000568038 GJA10Q969M2 543 aa8.73□□□□□ -1.01
SMG1-214ENST00000568038 KLHDC7BQ96G42 594 aa8.73□□□□□ -1.01
SMG1-214ENST00000568038 MBOAT7Q96N66 472 aa8.73□□□□□ -1.01
SMG1-214ENST00000568038 INPP4AQ96PE3 977 aaPredicted RBP8.73□□□□□ -1.01
SMG1-214ENST00000568038 PDGFCQ9NRA1 345 aa8.73□□□□□ -1.01
SMG1-214ENST00000568038 ZHX1Q9UKY1 873 aaPredicted RBP8.73□□□□□ -1.01
SMG1-214ENST00000568038 CFAP45Q9UL16 551 aa8.73□□□□□ -1.01
SMG1-214ENST00000568038 PTCH2Q9Y6C5 1203 aa8.73□□□□□ -1.01
SMG1-214ENST00000568038 SYNGAP1Q96PV0 1343 aa8.73□□□□□ -1.01
SMG1-214ENST00000568038 PDE2AO00408 941 aaPredicted RBP8.72□□□□□ -1.01
SMG1-214ENST00000568038 MSH4O15457 936 aa8.72□□□□□ -1.01
SMG1-214ENST00000568038 FIBPO43427 364 aa8.72□□□□□ -1.01
SMG1-214ENST00000568038 SORBS3O60504 671 aa8.72□□□□□ -1.01
SMG1-214ENST00000568038 BAG4O95429 457 aaKnown RBP8.72□□□□□ -1.01
SMG1-214ENST00000568038 MARCKSP29966 332 aaPredicted RBP8.72□□□□□ -1.01
SMG1-214ENST00000568038 GRK4P32298 578 aa8.72□□□□□ -1.01
SMG1-214ENST00000568038 TXKP42681 527 aa8.72□□□□□ -1.01
SMG1-214ENST00000568038 NASPP49321 788 aaPredicted RBP8.72□□□□□ -1.01
SMG1-214ENST00000568038 SETQ01105 290 aaPredicted RBP8.72□□□□□ -1.01
SMG1-214ENST00000568038 ACVR2BQ13705 512 aa8.72□□□□□ -1.01
SMG1-214ENST00000568038 PTPAQ15257 358 aa8.72□□□□□ -1.01
SMG1-214ENST00000568038 ATL3Q6DD88 541 aa8.72□□□□□ -1.01
SMG1-214ENST00000568038 NIPA1Q7RTP0 329 aa8.72□□□□□ -1.01
SMG1-214ENST00000568038 C4orf32Q8N8J7 132 aa8.72□□□□□ -1.01
SMG1-214ENST00000568038 LINC00301Q8NCQ3 95 aa8.72□□□□□ -1.01
SMG1-214ENST00000568038 SLC7A3Q8WY07 619 aa8.72□□□□□ -1.01
SMG1-214ENST00000568038 LENG9Q96B70 501 aa8.72□□□□□ -1.01
SMG1-214ENST00000568038 GPRASP2Q96D09 838 aa8.72□□□□□ -1.01
SMG1-214ENST00000568038 SPATA32Q96LK8 384 aa8.72□□□□□ -1.01
SMG1-214ENST00000568038 HHIPQ96QV1 700 aa8.72□□□□□ -1.01
SMG1-214ENST00000568038 UBL7Q96S82 380 aaPredicted RBP8.72□□□□□ -1.01
SMG1-214ENST00000568038 ARID3AQ99856 593 aa8.72□□□□□ -1.01
SMG1-214ENST00000568038 ZNF577Q9BSK1 485 aa8.72□□□□□ -1.01
SMG1-214ENST00000568038 ADAM19Q9H013 955 aa8.72□□□□□ -1.01
SMG1-214ENST00000568038 KATNBL1Q9H079 304 aa8.72□□□□□ -1.01
SMG1-214ENST00000568038 ABHD16BQ9H3Z7 469 aa8.72□□□□□ -1.01
SMG1-214ENST00000568038 AGO4Q9HCK5 861 aaKnown RBP8.72□□□□□ -1.01
SMG1-214ENST00000568038 VTA1Q9NP79 307 aa8.72□□□□□ -1.01
SMG1-214ENST00000568038 KCNH7Q9NS40 1196 aa8.72□□□□□ -1.01
SMG1-214ENST00000568038 CEP131Q9UPN4 1083 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms