RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 CLASRPQ8N2M8 674 aaKnown RBP6.24□□□□□ -1.41
CAPN3-217ENST00000567817 RCBTB1Q8NDN9 531 aa6.24□□□□□ -1.41
CAPN3-217ENST00000567817 SYAP1Q96A49 352 aaPredicted RBP6.24□□□□□ -1.41
CAPN3-217ENST00000567817 TRIM44Q96DX7 344 aaPredicted RBP6.24□□□□□ -1.41
CAPN3-217ENST00000567817 CCDC113Q9H0I3 377 aa6.24□□□□□ -1.41
CAPN3-217ENST00000567817 AP5M1Q9H0R1 490 aa6.24□□□□□ -1.41
CAPN3-217ENST00000567817 RXFP1Q9HBX9 757 aa6.24□□□□□ -1.41
CAPN3-217ENST00000567817 EPB41L4AQ9HCS5 686 aaPredicted RBP6.24□□□□□ -1.41
CAPN3-217ENST00000567817 ARHGEF4Q9NR80 690 aa6.24□□□□□ -1.41
CAPN3-217ENST00000567817 ATP6V1DQ9Y5K8 247 aa6.24□□□□□ -1.41
CAPN3-217ENST00000567817 LRRFIP2Q9Y608 721 aaKnown RBP6.24□□□□□ -1.41
CAPN3-217ENST00000567817 X6R8D5 127 aa6.24□□□□□ -1.41
CAPN3-217ENST00000567817 CACNA1FO60840 1977 aa6.24□□□□□ -1.41
CAPN3-217ENST00000567817 COL15A1P39059 1388 aa6.23□□□□□ -1.41
CAPN3-217ENST00000567817 HEG1Q9ULI3 1381 aa6.23□□□□□ -1.41
CAPN3-217ENST00000567817 H7BY64 318 aa6.23□□□□□ -1.41
CAPN3-217ENST00000567817 SMARCA5O60264 1052 aaPredicted RBP6.23□□□□□ -1.41
CAPN3-217ENST00000567817 DLX3O60479 287 aa6.23□□□□□ -1.41
CAPN3-217ENST00000567817 SURF6O75683 361 aaKnown RBP6.23□□□□□ -1.41
CAPN3-217ENST00000567817 ASGR2P07307 311 aa6.23□□□□□ -1.41
CAPN3-217ENST00000567817 FPR2P25090 351 aa6.23□□□□□ -1.41
CAPN3-217ENST00000567817 HSPA4P34932 840 aa6.23□□□□□ -1.41
CAPN3-217ENST00000567817 BCL6P41182 706 aa6.23□□□□□ -1.41
CAPN3-217ENST00000567817 AFF3P51826 1226 aaKnown RBP6.23□□□□□ -1.41
CAPN3-217ENST00000567817 SOX10P56693 466 aa6.23□□□□□ -1.41
CAPN3-217ENST00000567817 CAP1Q01518 475 aa6.23□□□□□ -1.41
CAPN3-217ENST00000567817 RBL2Q08999 1139 aa6.23□□□□□ -1.41
CAPN3-217ENST00000567817 FBLN7Q53RD9 439 aa6.23□□□□□ -1.41
CAPN3-217ENST00000567817 HS1BP3Q53T59 392 aa6.23□□□□□ -1.41
CAPN3-217ENST00000567817 BEND3Q5T5X7 828 aa6.23□□□□□ -1.41
CAPN3-217ENST00000567817 ZNF530Q6P9A1 599 aaPredicted RBP6.23□□□□□ -1.41
CAPN3-217ENST00000567817 CNKSR3Q6P9H4 555 aa6.23□□□□□ -1.41
CAPN3-217ENST00000567817 KSR2Q6VAB6 950 aa6.23□□□□□ -1.41
CAPN3-217ENST00000567817 USP50Q70EL3 339 aaPredicted RBP6.23□□□□□ -1.41
CAPN3-217ENST00000567817 SAPCD2Q86UD0 394 aa6.23□□□□□ -1.41
CAPN3-217ENST00000567817 RTKN2Q8IZC4 609 aa6.23□□□□□ -1.41
CAPN3-217ENST00000567817 OTUD7AQ8TE49 926 aaPredicted RBP6.23□□□□□ -1.41
CAPN3-217ENST00000567817 SEC14L1Q92503 715 aa6.23□□□□□ -1.41
CAPN3-217ENST00000567817 ZNF622Q969S3 477 aaKnown RBP eCLIP6.23□□□□□ -1.41
CAPN3-217ENST00000567817 DACT3Q96B18 629 aaPredicted RBP6.23□□□□□ -1.41
CAPN3-217ENST00000567817 TMEM169Q96HH4 297 aa6.23□□□□□ -1.41
CAPN3-217ENST00000567817 PLA2G2DQ9UNK4 145 aa6.23□□□□□ -1.41
CAPN3-217ENST00000567817 EXOC6BQ9Y2D4 811 aa6.23□□□□□ -1.41
CAPN3-217ENST00000567817 DDX49Q9Y6V7 483 aaKnown RBP6.23□□□□□ -1.41
CAPN3-217ENST00000567817 TRPM7Q96QT4 1865 aa6.23□□□□□ -1.41
CAPN3-217ENST00000567817 RAD50Q92878 1312 aa6.23□□□□□ -1.41
CAPN3-217ENST00000567817 TJP1Q07157 1748 aa6.22□□□□□ -1.41
CAPN3-217ENST00000567817 TRAV20A0A0B4J274 112 aa6.22□□□□□ -1.41
CAPN3-217ENST00000567817 PNMA6EA0A0J9YXQ4 647 aa6.22□□□□□ -1.41
CAPN3-217ENST00000567817 FZD9O00144 591 aa6.22□□□□□ -1.41
CAPN3-217ENST00000567817 RNMTO43148 476 aaKnown RBP6.22□□□□□ -1.41
CAPN3-217ENST00000567817 NCLP19338 710 aaKnown RBP6.22□□□□□ -1.41
CAPN3-217ENST00000567817 PMLP29590 882 aa6.22□□□□□ -1.41
CAPN3-217ENST00000567817 NEK4P51957 841 aa6.22□□□□□ -1.41
CAPN3-217ENST00000567817 LSAMPQ13449 338 aa6.22□□□□□ -1.41
CAPN3-217ENST00000567817 RSPO2Q6UXX9 243 aaPredicted RBP6.22□□□□□ -1.41
CAPN3-217ENST00000567817 CEP68Q76N32 757 aa6.22□□□□□ -1.41
CAPN3-217ENST00000567817 PPP1R42Q7Z4L9 355 aa6.22□□□□□ -1.41
CAPN3-217ENST00000567817 CTU1Q7Z7A3 348 aaKnown RBP6.22□□□□□ -1.41
CAPN3-217ENST00000567817 LINS1Q8NG48 757 aa6.22□□□□□ -1.41
CAPN3-217ENST00000567817 CPA5Q8WXQ8 436 aa6.22□□□□□ -1.41
CAPN3-217ENST00000567817 TRMT2BQ96GJ1 504 aaKnown RBP6.22□□□□□ -1.41
CAPN3-217ENST00000567817 MASTLQ96GX5 879 aa6.22□□□□□ -1.41
CAPN3-217ENST00000567817 TMX3Q96JJ7 454 aa6.22□□□□□ -1.41
CAPN3-217ENST00000567817 GPR27Q9NS67 375 aa6.22□□□□□ -1.41
CAPN3-217ENST00000567817 ECHDC1Q9NTX5 307 aa6.22□□□□□ -1.41
CAPN3-217ENST00000567817 FAN1Q9Y2M0 1017 aa6.22□□□□□ -1.41
CAPN3-217ENST00000567817 COA3Q9Y2R0 106 aaPredicted RBP6.22□□□□□ -1.41
CAPN3-217ENST00000567817 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.22□□□□□ -1.41
CAPN3-217ENST00000567817 PCDHA2Q9Y5H9 948 aa6.22□□□□□ -1.41
CAPN3-217ENST00000567817 CASP8AP2Q9UKL3 1982 aa6.22□□□□□ -1.41
CAPN3-217ENST00000567817 UTYO14607 1347 aa6.22□□□□□ -1.41
CAPN3-217ENST00000567817 CDHR2Q9BYE9 1310 aa6.22□□□□□ -1.41
CAPN3-217ENST00000567817 RFX7Q2KHR2 1363 aa6.21□□□□□ -1.41
CAPN3-217ENST00000567817 PI4KAP2A4QPH2 592 aa6.21□□□□□ -1.42
CAPN3-217ENST00000567817 SGSM2O43147 1006 aa6.21□□□□□ -1.42
CAPN3-217ENST00000567817 PRODHO43272 600 aa6.21□□□□□ -1.42
CAPN3-217ENST00000567817 SRGNP10124 158 aa6.21□□□□□ -1.42
CAPN3-217ENST00000567817 LCP1P13796 627 aa6.21□□□□□ -1.42
CAPN3-217ENST00000567817 ATF2P15336 505 aa6.21□□□□□ -1.42
CAPN3-217ENST00000567817 ST5P78524 1137 aa6.21□□□□□ -1.42
CAPN3-217ENST00000567817 NEXNQ0ZGT2 675 aa6.21□□□□□ -1.42
CAPN3-217ENST00000567817 GRM1Q13255 1194 aa6.21□□□□□ -1.42
CAPN3-217ENST00000567817 OS9Q13438 667 aaPredicted RBP6.21□□□□□ -1.42
CAPN3-217ENST00000567817 SERINC3Q13530 473 aa6.21□□□□□ -1.42
CAPN3-217ENST00000567817 MTERF2Q49AM1 385 aa6.21□□□□□ -1.42
CAPN3-217ENST00000567817 LRP10Q7Z4F1 713 aa6.21□□□□□ -1.42
CAPN3-217ENST00000567817 PI4KAP1Q8N8J0 262 aa6.21□□□□□ -1.42
CAPN3-217ENST00000567817 JDP2Q8WYK2 163 aa6.21□□□□□ -1.42
CAPN3-217ENST00000567817 RILPL2Q969X0 211 aa6.21□□□□□ -1.42
CAPN3-217ENST00000567817 EVI5LQ96CN4 794 aa6.21□□□□□ -1.42
CAPN3-217ENST00000567817 ZSCAN31Q96LW9 406 aaPredicted RBP6.21□□□□□ -1.42
CAPN3-217ENST00000567817 PWWP2AQ96N64 755 aa6.21□□□□□ -1.42
CAPN3-217ENST00000567817 SPATA9Q9BWV2 254 aa6.21□□□□□ -1.42
CAPN3-217ENST00000567817 TM6SF1Q9BZW5 370 aa6.21□□□□□ -1.42
CAPN3-217ENST00000567817 C9orf78Q9NZ63 289 aaPredicted RBP6.21□□□□□ -1.42
CAPN3-217ENST00000567817 CHPF2Q9P2E5 772 aa6.21□□□□□ -1.42
CAPN3-217ENST00000567817 FBXL7Q9UJT9 491 aa6.21□□□□□ -1.42
CAPN3-217ENST00000567817 SIT1Q9Y3P8 196 aa6.21□□□□□ -1.42
CAPN3-217ENST00000567817 ZNF541Q9H0D2 1346 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms