RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 FAM237AA0A1B0GTK4 181 aa13.44□□□□□ -0.26
SF3B3-208ENST00000567250 A0A1B0GVL5 298 aa13.44□□□□□ -0.26
SF3B3-208ENST00000567250 DENND3A2RUS2 1198 aa13.44□□□□□ -0.26
SF3B3-208ENST00000567250 PLS3P13797 630 aa13.44□□□□□ -0.26
SF3B3-208ENST00000567250 PEX3P56589 373 aa13.44□□□□□ -0.26
SF3B3-208ENST00000567250 WDR5P61964 334 aaKnown RBP13.44□□□□□ -0.26
SF3B3-208ENST00000567250 RAD51AP2Q09MP3 1159 aa13.44□□□□□ -0.26
SF3B3-208ENST00000567250 MAPK7Q13164 816 aa13.44□□□□□ -0.26
SF3B3-208ENST00000567250 RASIP1Q5U651 963 aa13.44□□□□□ -0.26
SF3B3-208ENST00000567250 TMEM87AQ8NBN3 555 aa13.44□□□□□ -0.26
SF3B3-208ENST00000567250 SLC17A8Q8NDX2 589 aa13.44□□□□□ -0.26
SF3B3-208ENST00000567250 PHOSPHO2Q8TCD6 241 aa13.44□□□□□ -0.26
SF3B3-208ENST00000567250 LRRC15Q8TF66 581 aa13.44□□□□□ -0.26
SF3B3-208ENST00000567250 VWCEQ96DN2 955 aa13.44□□□□□ -0.26
SF3B3-208ENST00000567250 KMT5AQ9NQR1 393 aa13.44□□□□□ -0.26
SF3B3-208ENST00000567250 CHST12Q9NRB3 414 aa13.44□□□□□ -0.26
SF3B3-208ENST00000567250 C1orf112Q9NSG2 853 aa13.44□□□□□ -0.26
SF3B3-208ENST00000567250 AGPAT5Q9NUQ2 364 aa13.44□□□□□ -0.26
SF3B3-208ENST00000567250 PRMT7Q9NVM4 692 aaPredicted RBP13.44□□□□□ -0.26
SF3B3-208ENST00000567250 KBTBD4Q9NVX7 518 aa13.44□□□□□ -0.26
SF3B3-208ENST00000567250 DACT1Q9NYF0 836 aa13.44□□□□□ -0.26
SF3B3-208ENST00000567250 PIN4Q9Y237 131 aaKnown RBP13.44□□□□□ -0.26
SF3B3-208ENST00000567250 HPSEQ9Y251 543 aa13.44□□□□□ -0.26
SF3B3-208ENST00000567250 RANBP2P49792 3224 aaKnown RBP13.43□□□□□ -0.26
SF3B3-208ENST00000567250 CCDC169A6NNP5 214 aa13.43□□□□□ -0.26
SF3B3-208ENST00000567250 MYL1P05976 194 aa13.43□□□□□ -0.26
SF3B3-208ENST00000567250 GAP43P17677 238 aa13.43□□□□□ -0.26
SF3B3-208ENST00000567250 AXLP30530 894 aa13.43□□□□□ -0.26
SF3B3-208ENST00000567250 ZNF131P52739 623 aa13.43□□□□□ -0.26
SF3B3-208ENST00000567250 MBTD1Q05BQ5 628 aa13.43□□□□□ -0.26
SF3B3-208ENST00000567250 GIT2Q14161 759 aa13.43□□□□□ -0.26
SF3B3-208ENST00000567250 MAPK6Q16659 721 aa13.43□□□□□ -0.26
SF3B3-208ENST00000567250 ARSHQ5FYA8 562 aa13.43□□□□□ -0.26
SF3B3-208ENST00000567250 DAW1Q8N136 415 aa13.43□□□□□ -0.26
SF3B3-208ENST00000567250 SPIRE2Q8WWL2 714 aa13.43□□□□□ -0.26
SF3B3-208ENST00000567250 BSNDQ8WZ55 320 aa13.43□□□□□ -0.26
SF3B3-208ENST00000567250 DDX12PQ92771 950 aa13.43□□□□□ -0.26
SF3B3-208ENST00000567250 CCDC51Q96ER9 411 aa13.43□□□□□ -0.26
SF3B3-208ENST00000567250 TSPYL2Q9H2G4 693 aaPredicted RBP13.43□□□□□ -0.26
SF3B3-208ENST00000567250 SEL1LQ9UBV2 794 aa13.43□□□□□ -0.26
SF3B3-208ENST00000567250 COL4A6Q14031 1691 aa13.43□□□□□ -0.26
SF3B3-208ENST00000567250 CNTNAP2Q9UHC6 1331 aa13.42□□□□□ -0.26
SF3B3-208ENST00000567250 GOLGA6L22H0YM25 854 aa13.42□□□□□ -0.26
SF3B3-208ENST00000567250 PRKCBP05771 671 aa13.42□□□□□ -0.26
SF3B3-208ENST00000567250 SLFN14P0C7P3 912 aa13.42□□□□□ -0.26
SF3B3-208ENST00000567250 STAG3L1P0CL83 205 aa13.42□□□□□ -0.26
SF3B3-208ENST00000567250 SKIP12755 728 aa13.42□□□□□ -0.26
SF3B3-208ENST00000567250 ATP2A2P16615 1042 aaKnown RBP13.42□□□□□ -0.26
SF3B3-208ENST00000567250 NPTX2P47972 431 aa13.42□□□□□ -0.26
SF3B3-208ENST00000567250 RAB27AP51159 221 aa13.42□□□□□ -0.26
SF3B3-208ENST00000567250 NDUFA8P51970 172 aa13.42□□□□□ -0.26
SF3B3-208ENST00000567250 STRN3Q13033 797 aa13.42□□□□□ -0.26
SF3B3-208ENST00000567250 FAM187BQ17R55 369 aa13.42□□□□□ -0.26
SF3B3-208ENST00000567250 TMEM132AQ24JP5 1023 aa13.42□□□□□ -0.26
SF3B3-208ENST00000567250 LRIT3Q3SXY7 679 aa13.42□□□□□ -0.26
SF3B3-208ENST00000567250 TPRNQ4KMQ1 711 aa13.42□□□□□ -0.26
SF3B3-208ENST00000567250 NOTUMQ6P988 496 aa13.42□□□□□ -0.26
SF3B3-208ENST00000567250 DYMQ7RTS9 669 aa13.42□□□□□ -0.26
SF3B3-208ENST00000567250 FAM178BQ8IXR5 827 aa13.42□□□□□ -0.26
SF3B3-208ENST00000567250 CCDC65Q8IXS2 484 aa13.42□□□□□ -0.26
SF3B3-208ENST00000567250 MYOCDQ8IZQ8 938 aa13.42□□□□□ -0.26
SF3B3-208ENST00000567250 MYCT1Q8N699 235 aa13.42□□□□□ -0.26
SF3B3-208ENST00000567250 OSBPL7Q9BZF2 842 aa13.42□□□□□ -0.26
SF3B3-208ENST00000567250 ZHX3Q9H4I2 956 aa13.42□□□□□ -0.26
SF3B3-208ENST00000567250 CXXC1Q9P0U4 656 aaPredicted RBP13.42□□□□□ -0.26
SF3B3-208ENST00000567250 TTC3P53804 2025 aa13.42□□□□□ -0.26
SF3B3-208ENST00000567250 NPHP3-ACAD11A0A0J9YXS1 232 aa13.41□□□□□ -0.26
SF3B3-208ENST00000567250 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.41□□□□□ -0.26
SF3B3-208ENST00000567250 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.41□□□□□ -0.26
SF3B3-208ENST00000567250 MYMKA6NI61 221 aa13.41□□□□□ -0.26
SF3B3-208ENST00000567250 K7ENM7 598 aa13.41□□□□□ -0.26
SF3B3-208ENST00000567250 K7ERI5 159 aa13.41□□□□□ -0.26
SF3B3-208ENST00000567250 TRAK2O60296 914 aa13.41□□□□□ -0.26
SF3B3-208ENST00000567250 IDEP14735 1019 aa13.41□□□□□ -0.26
SF3B3-208ENST00000567250 FGFR4P22455 802 aa13.41□□□□□ -0.26
SF3B3-208ENST00000567250 NCKAP1LP55160 1127 aa13.41□□□□□ -0.26
SF3B3-208ENST00000567250 ASIC1P78348 528 aa13.41□□□□□ -0.26
SF3B3-208ENST00000567250 FAM160A1Q05DH4 1040 aa13.41□□□□□ -0.26
SF3B3-208ENST00000567250 TWF2Q6IBS0 349 aaKnown RBP13.41□□□□□ -0.26
SF3B3-208ENST00000567250 KANK3Q6NY19 840 aa13.41□□□□□ -0.26
SF3B3-208ENST00000567250 CLEC17AQ6ZS10 378 aa13.41□□□□□ -0.26
SF3B3-208ENST00000567250 STXBP4Q6ZWJ1 553 aa13.41□□□□□ -0.26
SF3B3-208ENST00000567250 SLC24A5Q71RS6 500 aa13.41□□□□□ -0.26
SF3B3-208ENST00000567250 APBB1IPQ7Z5R6 666 aaPredicted RBP13.41□□□□□ -0.26
SF3B3-208ENST00000567250 CNNM3Q8NE01 707 aa13.41□□□□□ -0.26
SF3B3-208ENST00000567250 ADAM2Q99965 735 aa13.41□□□□□ -0.26
SF3B3-208ENST00000567250 TRIM9Q9C026 710 aa13.41□□□□□ -0.26
SF3B3-208ENST00000567250 TMEM134Q9H6X4 195 aa13.41□□□□□ -0.26
SF3B3-208ENST00000567250 MINDY3Q9H8M7 445 aa13.41□□□□□ -0.26
SF3B3-208ENST00000567250 OLFML3Q9NRN5 406 aa13.41□□□□□ -0.26
SF3B3-208ENST00000567250 RGS18Q9NS28 235 aa13.41□□□□□ -0.26
SF3B3-208ENST00000567250 ARHGAP28Q9P2N2 729 aa13.41□□□□□ -0.26
SF3B3-208ENST00000567250 HOOK1Q9UJC3 728 aaKnown RBP13.41□□□□□ -0.26
SF3B3-208ENST00000567250 LRFN2Q9ULH4 789 aa13.41□□□□□ -0.26
SF3B3-208ENST00000567250 RALGAPA2Q2PPJ7 1873 aa13.41□□□□□ -0.26
SF3B3-208ENST00000567250 ADGRA3Q8IWK6 1321 aa13.4□□□□□ -0.26
SF3B3-208ENST00000567250 SFI1A8K8P3 1242 aa13.4□□□□□ -0.26
SF3B3-208ENST00000567250 HOXA2O43364 376 aa13.4□□□□□ -0.26
SF3B3-208ENST00000567250 ACTN4O43707 911 aaKnown RBP13.4□□□□□ -0.26
SF3B3-208ENST00000567250 TSPAN1O60635 241 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms