RNA–Protein interactions for RNA: ENST00000566827.5

CDH11-212, Transcript of cadherin 11, humanhuman

TSL 2 BASIC

Gene CDH11, Length 2,395 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-212ENST00000566827 SLFN12Q8IYM2 578 aa12.14□□□□□ -0.47
CDH11-212ENST00000566827 KIFC3Q9BVG8 833 aa12.14□□□□□ -0.47
CDH11-212ENST00000566827 MINDY3Q9H8M7 445 aa12.14□□□□□ -0.47
CDH11-212ENST00000566827 HCSTQ9UBK5 93 aa12.14□□□□□ -0.47
CDH11-212ENST00000566827 AKT3Q9Y243 479 aa12.14□□□□□ -0.47
CDH11-212ENST00000566827 A0A087X0B3 334 aa12.13□□□□□ -0.47
CDH11-212ENST00000566827 LCHNA4D1U4 455 aa12.13□□□□□ -0.47
CDH11-212ENST00000566827 LZTS3O60299 673 aaPredicted RBP12.13□□□□□ -0.47
CDH11-212ENST00000566827 HBP1O60381 514 aa12.13□□□□□ -0.47
CDH11-212ENST00000566827 FXR1P51114 621 aaKnown RBP eCLIP12.13□□□□□ -0.47
CDH11-212ENST00000566827 PSMC5P62195 406 aa12.13□□□□□ -0.47
CDH11-212ENST00000566827 TBC1D8BQ0IIM8 1120 aa12.13□□□□□ -0.47
CDH11-212ENST00000566827 NFX1Q12986 1120 aaKnown RBP12.13□□□□□ -0.47
CDH11-212ENST00000566827 PTK7Q13308 1070 aa12.13□□□□□ -0.47
CDH11-212ENST00000566827 BECN1Q14457 450 aa12.13□□□□□ -0.47
CDH11-212ENST00000566827 LPIN1Q14693 890 aa12.13□□□□□ -0.47
CDH11-212ENST00000566827 KARSQ15046 597 aaKnown RBP12.13□□□□□ -0.47
CDH11-212ENST00000566827 TARBP2Q15633 366 aaKnown RBP12.13□□□□□ -0.47
CDH11-212ENST00000566827 RILPL1Q5EBL4 403 aa12.13□□□□□ -0.47
CDH11-212ENST00000566827 RHPN2Q8IUC4 686 aa12.13□□□□□ -0.47
CDH11-212ENST00000566827 SNX29Q8TEQ0 813 aa12.13□□□□□ -0.47
CDH11-212ENST00000566827 STAMQ92783 540 aa12.13□□□□□ -0.47
CDH11-212ENST00000566827 NLRP4Q96MN2 994 aa12.13□□□□□ -0.47
CDH11-212ENST00000566827 IER2Q9BTL4 223 aa12.13□□□□□ -0.47
CDH11-212ENST00000566827 XPNPEP1Q9NQW7 623 aa12.13□□□□□ -0.47
CDH11-212ENST00000566827 CYP26B1Q9NR63 512 aa12.13□□□□□ -0.47
CDH11-212ENST00000566827 DDX19AQ9NUU7 478 aaKnown RBP12.13□□□□□ -0.47
CDH11-212ENST00000566827 LRWD1Q9UFC0 647 aa12.13□□□□□ -0.47
CDH11-212ENST00000566827 NOL7Q9UMY1 257 aaKnown RBP12.13□□□□□ -0.47
CDH11-212ENST00000566827 KIF3AQ9Y496 699 aa12.13□□□□□ -0.47
CDH11-212ENST00000566827 MICAL3Q7RTP6 2002 aa12.13□□□□□ -0.47
CDH11-212ENST00000566827 TTLL13PA6NNM8 815 aa12.13□□□□□ -0.47
CDH11-212ENST00000566827 BAG4O95429 457 aaKnown RBP12.13□□□□□ -0.47
CDH11-212ENST00000566827 ZSCAN22P10073 491 aaPredicted RBP12.13□□□□□ -0.47
CDH11-212ENST00000566827 SFNP31947 248 aa12.13□□□□□ -0.47
CDH11-212ENST00000566827 MRE11P49959 708 aa12.13□□□□□ -0.47
CDH11-212ENST00000566827 DEPDC4Q8N2C3 294 aa12.13□□□□□ -0.47
CDH11-212ENST00000566827 PDILTQ8N807 584 aa12.13□□□□□ -0.47
CDH11-212ENST00000566827 SCYL1Q96KG9 808 aa12.13□□□□□ -0.47
CDH11-212ENST00000566827 CSRNP2Q9H175 543 aa12.13□□□□□ -0.47
CDH11-212ENST00000566827 BHMT2Q9H2M3 363 aa12.13□□□□□ -0.47
CDH11-212ENST00000566827 MTUS1Q9ULD2 1270 aa12.13□□□□□ -0.47
CDH11-212ENST00000566827 TBX3O15119 743 aa12.12□□□□□ -0.47
CDH11-212ENST00000566827 MGEA5O60502 916 aa12.12□□□□□ -0.47
CDH11-212ENST00000566827 F13A1P00488 732 aa12.12□□□□□ -0.47
CDH11-212ENST00000566827 SRGAP2CP0DJJ0 459 aa12.12□□□□□ -0.47
CDH11-212ENST00000566827 CCT6AP40227 531 aaKnown RBP12.12□□□□□ -0.47
CDH11-212ENST00000566827 GATMP50440 423 aa12.12□□□□□ -0.47
CDH11-212ENST00000566827 EPHA7Q15375 998 aa12.12□□□□□ -0.47
CDH11-212ENST00000566827 TMEM199Q8N511 208 aa12.12□□□□□ -0.47
CDH11-212ENST00000566827 IGSF22Q8N9C0 903 aa12.12□□□□□ -0.47
CDH11-212ENST00000566827 NOC2LQ9Y3T9 749 aaKnown RBP12.12□□□□□ -0.47
CDH11-212ENST00000566827 A0A087WZ62 844 aa12.12□□□□□ -0.47
CDH11-212ENST00000566827 PITPNM1O00562 1244 aa12.12□□□□□ -0.47
CDH11-212ENST00000566827 RARRES1P49788 294 aa12.12□□□□□ -0.47
CDH11-212ENST00000566827 MGAT3Q09327 533 aa12.12□□□□□ -0.47
CDH11-212ENST00000566827 RTN4RL1Q86UN2 441 aaPredicted RBP12.12□□□□□ -0.47
CDH11-212ENST00000566827 MYOCDQ8IZQ8 938 aa12.12□□□□□ -0.47
CDH11-212ENST00000566827 LINC01599Q8WXQ3 324 aa12.12□□□□□ -0.47
CDH11-212ENST00000566827 PNMA5Q96PV4 448 aa12.12□□□□□ -0.47
CDH11-212ENST00000566827 FDXACB1Q9BRP7 624 aaPredicted RBP12.12□□□□□ -0.47
CDH11-212ENST00000566827 IFIH1Q9BYX4 1025 aaKnown RBP12.12□□□□□ -0.47
CDH11-212ENST00000566827 IL23AQ9NPF7 189 aa12.12□□□□□ -0.47
CDH11-212ENST00000566827 GPR32O75388 356 aa12.11□□□□□ -0.47
CDH11-212ENST00000566827 SSBP05455 408 aaKnown RBP eCLIP12.11□□□□□ -0.47
CDH11-212ENST00000566827 XKR3Q5GH77 459 aa12.11□□□□□ -0.47
CDH11-212ENST00000566827 DTHD1Q6ZMT9 781 aa12.11□□□□□ -0.47
CDH11-212ENST00000566827 BSNDQ8WZ55 320 aa12.11□□□□□ -0.47
CDH11-212ENST00000566827 DCTN4Q9UJW0 460 aa12.11□□□□□ -0.47
CDH11-212ENST00000566827 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.11□□□□□ -0.47
CDH11-212ENST00000566827 CFAP69A5D8W1 941 aa12.11□□□□□ -0.47
CDH11-212ENST00000566827 MEIS3P2A8K0S8 358 aa12.11□□□□□ -0.47
CDH11-212ENST00000566827 LIG1P18858 919 aa12.11□□□□□ -0.47
CDH11-212ENST00000566827 PDCP20941 246 aa12.11□□□□□ -0.47
CDH11-212ENST00000566827 CASP1P29466 404 aa12.11□□□□□ -0.47
CDH11-212ENST00000566827 TRAPPC10P48553 1259 aa12.11□□□□□ -0.47
CDH11-212ENST00000566827 MRPS6P82932 125 aaKnown RBP12.11□□□□□ -0.47
CDH11-212ENST00000566827 GRB10Q13322 594 aa12.11□□□□□ -0.47
CDH11-212ENST00000566827 PRPF31Q8WWY3 499 aaKnown RBP12.11□□□□□ -0.47
CDH11-212ENST00000566827 RNF34Q969K3 372 aa12.11□□□□□ -0.47
CDH11-212ENST00000566827 SCLT1Q96NL6 688 aa12.11□□□□□ -0.47
CDH11-212ENST00000566827 RUSC1Q9BVN2 902 aa12.11□□□□□ -0.47
CDH11-212ENST00000566827 IKZF4Q9H2S9 585 aa12.11□□□□□ -0.47
CDH11-212ENST00000566827 TMX1Q9H3N1 280 aa12.11□□□□□ -0.47
CDH11-212ENST00000566827 SFMBT1Q9UHJ3 866 aa12.11□□□□□ -0.47
CDH11-212ENST00000566827 FBXO2Q9UK22 296 aaPredicted RBP12.11□□□□□ -0.47
CDH11-212ENST00000566827 YBX2Q9Y2T7 364 aaKnown RBP12.11□□□□□ -0.47
CDH11-212ENST00000566827 PCDHA2Q9Y5H9 948 aa12.11□□□□□ -0.47
CDH11-212ENST00000566827 CUL9Q8IWT3 2517 aa12.1□□□□□ -0.47
CDH11-212ENST00000566827 RFXAPO00287 272 aa12.1□□□□□ -0.47
CDH11-212ENST00000566827 FGBP02675 491 aa12.1□□□□□ -0.47
CDH11-212ENST00000566827 EDN1P05305 212 aa12.1□□□□□ -0.47
CDH11-212ENST00000566827 POLGP54098 1239 aaPredicted RBP12.1□□□□□ -0.47
CDH11-212ENST00000566827 BFSP2Q13515 415 aa12.1□□□□□ -0.47
CDH11-212ENST00000566827 FBXO47Q5MNV8 452 aa12.1□□□□□ -0.47
CDH11-212ENST00000566827 GLYCTKQ8IVS8 523 aa12.1□□□□□ -0.47
CDH11-212ENST00000566827 LINC01465Q8N7H1 131 aa12.1□□□□□ -0.47
CDH11-212ENST00000566827 ASAP3Q8TDY4 903 aa12.1□□□□□ -0.47
CDH11-212ENST00000566827 PADI3Q9ULW8 664 aa12.1□□□□□ -0.47
CDH11-212ENST00000566827 TTC28Q96AY4 2481 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms