RNA–Protein interactions for RNA: ENST00000566818.1

IFT140-208, Transcript of intraflagellar transport 140, humanhuman

TSL 3

Gene IFT140, Length 722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-208ENST00000566818 MICAL1Q8TDZ2 1067 aa20.9■□□□□ 0.94
IFT140-208ENST00000566818 PGBD4Q96DM1 585 aa20.9■□□□□ 0.94
IFT140-208ENST00000566818 TUFT1Q9NNX1 390 aa20.9■□□□□ 0.94
IFT140-208ENST00000566818 FAM105AQ9NUU6 356 aa20.9■□□□□ 0.94
IFT140-208ENST00000566818 GRXCR2A6NFK2 248 aa20.89■□□□□ 0.93
IFT140-208ENST00000566818 ZBTB39O15060 712 aa20.89■□□□□ 0.93
IFT140-208ENST00000566818 ERLIN2O94905 339 aa20.89■□□□□ 0.93
IFT140-208ENST00000566818 NDUFV1P49821 464 aa20.89■□□□□ 0.93
IFT140-208ENST00000566818 PLCB3Q01970 1234 aa20.89■□□□□ 0.93
IFT140-208ENST00000566818 PCBP1Q15365 356 aaKnown RBP eCLIP20.89■□□□□ 0.93
IFT140-208ENST00000566818 ZNF174Q15697 407 aa20.89■□□□□ 0.93
IFT140-208ENST00000566818 KCNT2Q6UVM3 1135 aa20.89■□□□□ 0.93
IFT140-208ENST00000566818 GLB1LQ6UWU2 654 aa20.89■□□□□ 0.93
IFT140-208ENST00000566818 LRRC55Q6ZSA7 311 aa20.89■□□□□ 0.93
IFT140-208ENST00000566818 MRPS27Q92552 414 aaKnown RBP20.89■□□□□ 0.93
IFT140-208ENST00000566818 XPNPEP1Q9NQW7 623 aa20.89■□□□□ 0.93
IFT140-208ENST00000566818 MYO7AQ13402 2215 aa20.89■□□□□ 0.93
IFT140-208ENST00000566818 XRCC6P12956 609 aaKnown RBP eCLIP20.88■□□□□ 0.93
IFT140-208ENST00000566818 IL9P15248 144 aa20.88■□□□□ 0.93
IFT140-208ENST00000566818 NRIP1P48552 1158 aa20.88■□□□□ 0.93
IFT140-208ENST00000566818 RARRES1P49788 294 aa20.88■□□□□ 0.93
IFT140-208ENST00000566818 KRT17Q04695 432 aa20.88■□□□□ 0.93
IFT140-208ENST00000566818 HAUS3Q68CZ6 603 aa20.88■□□□□ 0.93
IFT140-208ENST00000566818 EFHBQ8N7U6 833 aa20.88■□□□□ 0.93
IFT140-208ENST00000566818 SPG21Q9NZD8 308 aa20.88■□□□□ 0.93
IFT140-208ENST00000566818 MUC3AQ02505 3323 aa20.88■□□□□ 0.93
IFT140-208ENST00000566818 ZNF623O75123 536 aa20.87■□□□□ 0.93
IFT140-208ENST00000566818 TECP42680 631 aa20.87■□□□□ 0.93
IFT140-208ENST00000566818 NCBP1Q09161 790 aaKnown RBP20.87■□□□□ 0.93
IFT140-208ENST00000566818 ADGRD2Q7Z7M1 963 aa20.87■□□□□ 0.93
IFT140-208ENST00000566818 PIGOQ8TEQ8 1089 aa20.87■□□□□ 0.93
IFT140-208ENST00000566818 CDCA3Q99618 268 aaPredicted RBP20.87■□□□□ 0.93
IFT140-208ENST00000566818 POLR3CQ9BUI4 534 aaPredicted RBP20.87■□□□□ 0.93
IFT140-208ENST00000566818 TLE6Q9H808 572 aa20.87■□□□□ 0.93
IFT140-208ENST00000566818 ENTPD7Q9NQZ7 604 aa20.87■□□□□ 0.93
IFT140-208ENST00000566818 CNTNAP2Q9UHC6 1331 aa20.86■□□□□ 0.93
IFT140-208ENST00000566818 USO1O60763 962 aaKnown RBP20.86■□□□□ 0.93
IFT140-208ENST00000566818 TBX10O75333 385 aa20.86■□□□□ 0.93
IFT140-208ENST00000566818 U2AF2P26368 475 aaKnown RBP eCLIP20.86■□□□□ 0.93
IFT140-208ENST00000566818 AXLP30530 894 aa20.86■□□□□ 0.93
IFT140-208ENST00000566818 GTF2F1P35269 517 aaKnown RBP eCLIP20.86■□□□□ 0.93
IFT140-208ENST00000566818 LTBRP36941 435 aa20.86■□□□□ 0.93
IFT140-208ENST00000566818 ALDH7A1P49419 539 aaKnown RBP20.86■□□□□ 0.93
IFT140-208ENST00000566818 MCM2P49736 904 aa20.86■□□□□ 0.93
IFT140-208ENST00000566818 POU5F1BQ06416 359 aa20.86■□□□□ 0.93
IFT140-208ENST00000566818 ADAM15Q13444 863 aa20.86■□□□□ 0.93
IFT140-208ENST00000566818 FAM178BQ8IXR5 827 aa20.86■□□□□ 0.93
IFT140-208ENST00000566818 MCPH1Q8NEM0 835 aa20.86■□□□□ 0.93
IFT140-208ENST00000566818 URGCPQ8TCY9 931 aa20.86■□□□□ 0.93
IFT140-208ENST00000566818 LPPQ93052 612 aa20.86■□□□□ 0.93
IFT140-208ENST00000566818 CCDC51Q96ER9 411 aa20.86■□□□□ 0.93
IFT140-208ENST00000566818 NACC1Q96RE7 527 aa20.86■□□□□ 0.93
IFT140-208ENST00000566818 POLR3FQ9H1D9 316 aaPredicted RBP20.86■□□□□ 0.93
IFT140-208ENST00000566818 MINDY3Q9H8M7 445 aa20.86■□□□□ 0.93
IFT140-208ENST00000566818 CD207Q9UJ71 328 aa20.86■□□□□ 0.93
IFT140-208ENST00000566818 DBR1Q9UK59 544 aaKnown RBP20.86■□□□□ 0.93
IFT140-208ENST00000566818 INPP5FQ9Y2H2 1132 aa20.86■□□□□ 0.93
IFT140-208ENST00000566818 PCDHB2Q9Y5E7 798 aa20.86■□□□□ 0.93
IFT140-208ENST00000566818 INO80B-WBP1J3KQ70 363 aa20.85■□□□□ 0.93
IFT140-208ENST00000566818 FSCN2O14926 492 aa20.85■□□□□ 0.93
IFT140-208ENST00000566818 LINC01565O15544 149 aa20.85■□□□□ 0.93
IFT140-208ENST00000566818 SPATA31C1P0DKV0 1188 aa20.85■□□□□ 0.93
IFT140-208ENST00000566818 SRGAP2BP0DMP2 458 aa20.85■□□□□ 0.93
IFT140-208ENST00000566818 SSTR3P32745 418 aaPredicted RBP20.85■□□□□ 0.93
IFT140-208ENST00000566818 PBX3P40426 434 aa20.85■□□□□ 0.93
IFT140-208ENST00000566818 PTENP60484 403 aa20.85■□□□□ 0.93
IFT140-208ENST00000566818 RNASELQ05823 741 aaKnown RBP20.85■□□□□ 0.93
IFT140-208ENST00000566818 SMAD4Q13485 552 aaKnown RBP20.85■□□□□ 0.93
IFT140-208ENST00000566818 CAPSQ13938 189 aa20.85■□□□□ 0.93
IFT140-208ENST00000566818 CLUL1Q15846 466 aa20.85■□□□□ 0.93
IFT140-208ENST00000566818 NOMO2Q5JPE7 1267 aa20.85■□□□□ 0.93
IFT140-208ENST00000566818 PLPP4Q5VZY2 271 aa20.85■□□□□ 0.93
IFT140-208ENST00000566818 NOTUMQ6P988 496 aa20.85■□□□□ 0.93
IFT140-208ENST00000566818 RBM23Q86U06 439 aaKnown RBP20.85■□□□□ 0.93
IFT140-208ENST00000566818 CATSPER3Q86XQ3 398 aa20.85■□□□□ 0.93
IFT140-208ENST00000566818 IFNLR1Q8IU57 520 aaPredicted RBP20.85■□□□□ 0.93
IFT140-208ENST00000566818 SLC39A11Q8N1S5 342 aa20.85■□□□□ 0.93
IFT140-208ENST00000566818 CNNM3Q8NE01 707 aa20.85■□□□□ 0.93
IFT140-208ENST00000566818 ASAP3Q8TDY4 903 aa20.85■□□□□ 0.93
IFT140-208ENST00000566818 TCF25Q9BQ70 676 aa20.85■□□□□ 0.93
IFT140-208ENST00000566818 RAB34Q9BZG1 259 aa20.85■□□□□ 0.93
IFT140-208ENST00000566818 NGRNQ9NPE2 291 aaKnown RBP20.85■□□□□ 0.93
IFT140-208ENST00000566818 PRKAG3Q9UGI9 489 aa20.85■□□□□ 0.93
IFT140-208ENST00000566818 PCDHGC5Q9Y5F6 944 aa20.85■□□□□ 0.93
IFT140-208ENST00000566818 STK24Q9Y6E0 443 aa20.85■□□□□ 0.93
IFT140-208ENST00000566818 ZC3H11AO75152 810 aaKnown RBP eCLIP20.84■□□□□ 0.93
IFT140-208ENST00000566818 MED24O75448 989 aa20.84■□□□□ 0.93
IFT140-208ENST00000566818 MUTP22033 750 aa20.84■□□□□ 0.93
IFT140-208ENST00000566818 RPA1P27694 616 aa20.84■□□□□ 0.93
IFT140-208ENST00000566818 ARL2P36404 184 aa20.84■□□□□ 0.93
IFT140-208ENST00000566818 FXR2P51116 673 aaKnown RBP eCLIP20.84■□□□□ 0.93
IFT140-208ENST00000566818 BCAR1P56945 870 aa20.84■□□□□ 0.93
IFT140-208ENST00000566818 ERVFC1P60507 584 aa20.84■□□□□ 0.93
IFT140-208ENST00000566818 BMS1Q14692 1282 aaKnown RBP20.84■□□□□ 0.93
IFT140-208ENST00000566818 LONRF3Q496Y0 759 aa20.84■□□□□ 0.93
IFT140-208ENST00000566818 POTEGQ6S5H5 508 aa20.84■□□□□ 0.93
IFT140-208ENST00000566818 GJD3Q8N144 294 aa20.84■□□□□ 0.93
IFT140-208ENST00000566818 TMEM169Q96HH4 297 aa20.84■□□□□ 0.93
IFT140-208ENST00000566818 TMX3Q96JJ7 454 aa20.84■□□□□ 0.93
IFT140-208ENST00000566818 C1QTNF1Q9BXJ1 281 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms