RNA–Protein interactions for RNA: ENST00000566669.1

UBFD1-206, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-206ENST00000566669 ANKRD54Q6NXT1 300 aa30.95■■■□□ 2.55
UBFD1-206ENST00000566669 CSDE1O75534 798 aaKnown RBP30.94■■■□□ 2.54
UBFD1-206ENST00000566669 KRT2P35908 639 aa30.94■■■□□ 2.54
UBFD1-206ENST00000566669 BCAR1P56945 870 aa30.94■■■□□ 2.54
UBFD1-206ENST00000566669 PLA2G4FQ68DD2 849 aa30.94■■■□□ 2.54
UBFD1-206ENST00000566669 SH2D3AQ9BRG2 576 aa30.94■■■□□ 2.54
UBFD1-206ENST00000566669 AGPAT5Q9NUQ2 364 aa30.94■■■□□ 2.54
UBFD1-206ENST00000566669 HOXD11P31277 338 aaPredicted RBP30.93■■■□□ 2.54
UBFD1-206ENST00000566669 YWHABP31946 246 aaKnown RBP30.93■■■□□ 2.54
UBFD1-206ENST00000566669 TECP42680 631 aa30.93■■■□□ 2.54
UBFD1-206ENST00000566669 NOMO2Q5JPE7 1267 aa30.93■■■□□ 2.54
UBFD1-206ENST00000566669 VN1R2Q8NFZ6 395 aa30.93■■■□□ 2.54
UBFD1-206ENST00000566669 HAS1Q92839 578 aa30.93■■■□□ 2.54
UBFD1-206ENST00000566669 LXNQ9BS40 222 aa30.93■■■□□ 2.54
UBFD1-206ENST00000566669 IFT122Q9HBG6 1241 aa30.93■■■□□ 2.54
UBFD1-206ENST00000566669 HIDE1A8MVS5 230 aa30.92■■■□□ 2.54
UBFD1-206ENST00000566669 AK2P54819 239 aa30.92■■■□□ 2.54
UBFD1-206ENST00000566669 ITIH3Q06033 890 aa30.92■■■□□ 2.54
UBFD1-206ENST00000566669 BMP8AQ7Z5Y6 402 aa30.92■■■□□ 2.54
UBFD1-206ENST00000566669 TMEM87AQ8NBN3 555 aa30.92■■■□□ 2.54
UBFD1-206ENST00000566669 CNNM3Q8NE01 707 aa30.92■■■□□ 2.54
UBFD1-206ENST00000566669 URGCPQ8TCY9 931 aa30.92■■■□□ 2.54
UBFD1-206ENST00000566669 PRPF31Q8WWY3 499 aaKnown RBP30.92■■■□□ 2.54
UBFD1-206ENST00000566669 NECTIN4Q96NY8 510 aa30.92■■■□□ 2.54
UBFD1-206ENST00000566669 KANSL3Q9P2N6 904 aa30.92■■■□□ 2.54
UBFD1-206ENST00000566669 IRAK3Q9Y616 596 aa30.92■■■□□ 2.54
UBFD1-206ENST00000566669 CNTNAP2Q9UHC6 1331 aa30.92■■■□□ 2.54
UBFD1-206ENST00000566669 C2orf71A6NGG8 1288 aa30.91■■■□□ 2.54
UBFD1-206ENST00000566669 PBX3P40426 434 aa30.91■■■□□ 2.54
UBFD1-206ENST00000566669 NPEPPSP55786 919 aa30.91■■■□□ 2.54
UBFD1-206ENST00000566669 RNASELQ05823 741 aaKnown RBP30.91■■■□□ 2.54
UBFD1-206ENST00000566669 MXD4Q14582 209 aaPredicted RBP30.91■■■□□ 2.54
UBFD1-206ENST00000566669 CES5AQ6NT32 575 aa30.91■■■□□ 2.54
UBFD1-206ENST00000566669 S1PR5Q9H228 398 aa30.91■■■□□ 2.54
UBFD1-206ENST00000566669 PPP4R2Q9NY27 417 aa30.91■■■□□ 2.54
UBFD1-206ENST00000566669 ZC3H11AO75152 810 aaKnown RBP eCLIP30.9■■■□□ 2.54
UBFD1-206ENST00000566669 CTDNEP1O95476 244 aa30.9■■■□□ 2.54
UBFD1-206ENST00000566669 NCBP1Q09161 790 aaKnown RBP30.9■■■□□ 2.54
UBFD1-206ENST00000566669 DDX53Q86TM3 631 aaKnown RBP30.9■■■□□ 2.54
UBFD1-206ENST00000566669 OXER1Q8TDS5 423 aa30.9■■■□□ 2.54
UBFD1-206ENST00000566669 UBN1Q9NPG3 1134 aa30.9■■■□□ 2.54
UBFD1-206ENST00000566669 MUC6Q6W4X9 2439 aa30.9■■■□□ 2.54
UBFD1-206ENST00000566669 LAMTOR4Q0VGL1 99 aa30.89■■■□□ 2.54
UBFD1-206ENST00000566669 TRIM29Q14134 588 aa30.89■■■□□ 2.54
UBFD1-206ENST00000566669 NCAPH2Q6IBW4 605 aa30.89■■■□□ 2.54
UBFD1-206ENST00000566669 POTEDQ86YR6 584 aa30.89■■■□□ 2.54
UBFD1-206ENST00000566669 KSR1Q8IVT5 923 aa30.89■■■□□ 2.54
UBFD1-206ENST00000566669 GTF3C6Q969F1 213 aa30.89■■■□□ 2.54
UBFD1-206ENST00000566669 TBC1D13Q9NVG8 400 aa30.89■■■□□ 2.54
UBFD1-206ENST00000566669 PCDHA12Q9UN75 941 aa30.89■■■□□ 2.54
UBFD1-206ENST00000566669 NR2E1Q9Y466 385 aa30.89■■■□□ 2.54
UBFD1-206ENST00000566669 PCDHB2Q9Y5E7 798 aa30.89■■■□□ 2.54
UBFD1-206ENST00000566669 LYPLA2O95372 231 aa30.88■■■□□ 2.53
UBFD1-206ENST00000566669 AXLP30530 894 aa30.88■■■□□ 2.53
UBFD1-206ENST00000566669 POU5F1BQ06416 359 aa30.88■■■□□ 2.53
UBFD1-206ENST00000566669 SPIRE1Q08AE8 756 aa30.88■■■□□ 2.53
UBFD1-206ENST00000566669 EMC2Q15006 297 aa30.88■■■□□ 2.53
UBFD1-206ENST00000566669 XKR9Q5GH70 373 aa30.88■■■□□ 2.53
UBFD1-206ENST00000566669 SYCE2Q6PIF2 218 aa30.88■■■□□ 2.53
UBFD1-206ENST00000566669 HFE2Q6ZVN8 426 aa30.88■■■□□ 2.53
UBFD1-206ENST00000566669 MRPL10Q7Z7H8 261 aaKnown RBP30.88■■■□□ 2.53
UBFD1-206ENST00000566669 CCDC51Q96ER9 411 aa30.88■■■□□ 2.53
UBFD1-206ENST00000566669 IGSF21Q96ID5 467 aa30.88■■■□□ 2.53
UBFD1-206ENST00000566669 RPGRIP1Q96KN7 1286 aa30.88■■■□□ 2.53
UBFD1-206ENST00000566669 MTRQ99707 1265 aa30.88■■■□□ 2.53
UBFD1-206ENST00000566669 DZANK1Q9NVP4 752 aa30.88■■■□□ 2.53
UBFD1-206ENST00000566669 TRIOO75962 3097 aa30.88■■■□□ 2.53
UBFD1-206ENST00000566669 PIEZO1Q92508 2521 aa30.88■■■□□ 2.53
UBFD1-206ENST00000566669 OFD1O75665 1012 aa30.87■■■□□ 2.53
UBFD1-206ENST00000566669 CXCL14O95715 111 aa30.87■■■□□ 2.53
UBFD1-206ENST00000566669 SRGAP2CP0DJJ0 459 aa30.87■■■□□ 2.53
UBFD1-206ENST00000566669 RBM10P98175 930 aaKnown RBP30.87■■■□□ 2.53
UBFD1-206ENST00000566669 TFDP1Q14186 410 aa30.87■■■□□ 2.53
UBFD1-206ENST00000566669 TRIM67Q6ZTA4 783 aa30.87■■■□□ 2.53
UBFD1-206ENST00000566669 FERMT3Q86UX7 667 aa30.87■■■□□ 2.53
UBFD1-206ENST00000566669 PPFIBP1Q86W92 1011 aa30.87■■■□□ 2.53
UBFD1-206ENST00000566669 VPS52Q8N1B4 723 aa30.87■■■□□ 2.53
UBFD1-206ENST00000566669 TMEM143Q96AN5 459 aa30.87■■■□□ 2.53
UBFD1-206ENST00000566669 WRAP73Q9P2S5 460 aaPredicted RBP30.87■■■□□ 2.53
UBFD1-206ENST00000566669 HCFC2Q9Y5Z7 792 aa30.87■■■□□ 2.53
UBFD1-206ENST00000566669 ERLIN2O94905 339 aa30.86■■■□□ 2.53
UBFD1-206ENST00000566669 CTSAP10619 480 aa30.86■■■□□ 2.53
UBFD1-206ENST00000566669 ZXDAP98168 799 aa30.86■■■□□ 2.53
UBFD1-206ENST00000566669 LLGL2Q6P1M3 1020 aa30.86■■■□□ 2.53
UBFD1-206ENST00000566669 TNFRSF25Q93038 417 aa30.86■■■□□ 2.53
UBFD1-206ENST00000566669 LPPQ93052 612 aa30.86■■■□□ 2.53
UBFD1-206ENST00000566669 DYDC2Q96IM9 177 aa30.86■■■□□ 2.53
UBFD1-206ENST00000566669 PRRX2Q99811 253 aa30.86■■■□□ 2.53
UBFD1-206ENST00000566669 ZBP1Q9H171 429 aa30.86■■■□□ 2.53
UBFD1-206ENST00000566669 ADAM7Q9H2U9 754 aa30.86■■■□□ 2.53
UBFD1-206ENST00000566669 NRDE2Q9H7Z3 1164 aa30.86■■■□□ 2.53
UBFD1-206ENST00000566669 GJB4Q9NTQ9 266 aa30.86■■■□□ 2.53
UBFD1-206ENST00000566669 ANKEF1Q9NU02 776 aa30.86■■■□□ 2.53
UBFD1-206ENST00000566669 RGL1Q9NZL6 768 aa30.86■■■□□ 2.53
UBFD1-206ENST00000566669 GALTP07902 379 aa30.85■■■□□ 2.53
UBFD1-206ENST00000566669 FDPSP14324 419 aaKnown RBP30.85■■■□□ 2.53
UBFD1-206ENST00000566669 MTHFRP42898 656 aa30.85■■■□□ 2.53
UBFD1-206ENST00000566669 NR5A1Q13285 461 aa30.85■■■□□ 2.53
UBFD1-206ENST00000566669 CALCRLQ16602 461 aa30.85■■■□□ 2.53
UBFD1-206ENST00000566669 TPH2Q8IWU9 490 aa30.85■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms