RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 CETN3O15182 167 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 KLRC4O43908 158 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 AFPP02771 609 aaKnown RBP3.12□□□□□ -1.91
CHD9-218ENST00000566029 TXKP42681 527 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 SLC1A4P43007 532 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 COG7P83436 770 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 NONOQ15233 471 aaKnown RBP eCLIP3.12□□□□□ -1.919e-7■■■■□ 20.8
CHD9-218ENST00000566029 LETM2Q2VYF4 491 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 SNX30Q5VWJ9 437 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 BSPRYQ5W0U4 402 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 MFSD5Q6N075 450 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 ATP2A3Q93084 1043 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 PRR36Q9H6K5 1346 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 NMRK1Q9NWW6 199 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 PRKAB1Q9Y478 270 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 PPME1Q9Y570 386 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 UMODL1Q5DID0 1318 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 EMSYQ7Z589 1322 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 AGRPO00253 132 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 PCP11498 1178 aaKnown RBP3.12□□□□□ -1.91
CHD9-218ENST00000566029 COL6A2P12110 1019 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 ATP2A2P16615 1042 aaKnown RBP3.12□□□□□ -1.91
CHD9-218ENST00000566029 PHLDB3Q6NSJ2 640 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 CCNJLQ8IV13 435 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 UNC45BQ8IWX7 931 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 LRRC57Q8N9N7 239 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 NRG4Q8WWG1 115 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 SHISA4Q96DD7 197 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 ERLEC1Q96DZ1 483 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 SYNJ2BP-COX16A0A087WUM0 186 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 TMEM247A6NEH6 219 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 CCDC188H7C350 402 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 LMNAP02545 664 aaKnown RBP3.12□□□□□ -1.91
CHD9-218ENST00000566029 CCT8P50990 548 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 ACVR2BQ13705 512 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 RCN2Q14257 317 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 SPA17Q15506 151 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 RILPL1Q5EBL4 403 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 SULT1C3Q6IMI6 304 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 ARHGAP27Q6ZUM4 889 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 OGFOD1Q8N543 542 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 PPHLN1Q8NEY8 458 aaKnown RBP3.12□□□□□ -1.91
CHD9-218ENST00000566029 ABHD8Q96I13 439 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 NEUROD6Q96NK8 337 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 TRIM51Q9BSJ1 452 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 UNC45AQ9H3U1 944 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 SLITRK6Q9H5Y7 841 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 EXOC1Q9NV70 894 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 IL20Q9NYY1 176 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 CHPF2Q9P2E5 772 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 PCDHB6Q9Y5E3 794 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 SPO11Q9Y5K1 396 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 HTR3EA5X5Y0 456 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 BTNL10A8MVZ5 291 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 CYTH3O43739 400 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 CRTAPO75718 401 aaPredicted RBP3.12□□□□□ -1.91
CHD9-218ENST00000566029 PSMG1O95456 288 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 RPN1P04843 607 aaKnown RBP3.12□□□□□ -1.91
CHD9-218ENST00000566029 DDX5P17844 614 aaKnown RBP3.12□□□□□ -1.91
CHD9-218ENST00000566029 BASP1P80723 227 aaKnown RBP3.12□□□□□ -1.91
CHD9-218ENST00000566029 GSTM4Q03013 218 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 UBXN1Q04323 297 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 ZC2HC1CQ53FD0 456 aaPredicted RBP3.12□□□□□ -1.91
CHD9-218ENST00000566029 ATP6V1E2Q96A05 226 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 SCYL1Q96KG9 808 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 CTTNBP2NLQ9P2B4 639 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 SUCLA2Q9P2R7 463 aaPredicted RBP3.12□□□□□ -1.91
CHD9-218ENST00000566029 NRKQ7Z2Y5 1582 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 MAGEB2O15479 319 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 HNRNPRO43390 633 aaKnown RBP3.12□□□□□ -1.91
CHD9-218ENST00000566029 DKC1O60832 514 aaKnown RBP eCLIP3.12□□□□□ -1.912e-6■■■□□ 16.1
CHD9-218ENST00000566029 EYA4O95677 639 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 NAT1P18440 290 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 CASP1P29466 404 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 UBE3AQ05086 875 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 BTKQ06187 659 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 HNRNPDQ14103 355 aaKnown RBP3.12□□□□□ -1.91
CHD9-218ENST00000566029 BCL2A1Q16548 175 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 GEN1Q17RS7 908 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 C6orf163Q5TEZ5 329 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 SMYD4Q8IYR2 804 aaPredicted RBP3.12□□□□□ -1.91
CHD9-218ENST00000566029 RNF169Q8NCN4 708 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 MAML1Q92585 1016 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 OLFM3Q96PB7 478 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 NUDT16L1Q9BRJ7 211 aaKnown RBP3.12□□□□□ -1.91
CHD9-218ENST00000566029 MAK16Q9BXY0 300 aaKnown RBP3.12□□□□□ -1.91
CHD9-218ENST00000566029 MYLK2Q9H1R3 596 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 CCDC87Q9NVE4 849 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 TEKT2Q9UIF3 430 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 INTUQ9ULD6 942 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 SH3GLB1Q9Y371 365 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 POLR2DO15514 142 aaKnown RBP3.12□□□□□ -1.91
CHD9-218ENST00000566029 SUN1O94901 812 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 ZWINTO95229 277 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 TPBGLP0DKB5 382 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 FLT3P36888 993 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 CEP78Q5JTW2 689 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 SGMS1Q86VZ5 419 aa3.12□□□□□ -1.91
CHD9-218ENST00000566029 IFIH1Q9BYX4 1025 aaKnown RBP3.12□□□□□ -1.91
CHD9-218ENST00000566029 RMND1Q9NWS8 449 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms