RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 P4HBP07237 508 aaKnown RBP9.62□□□□□ -0.87
CAPN3-213ENST00000565173 GALTP07902 379 aa9.62□□□□□ -0.87
CAPN3-213ENST00000565173 SFPQP23246 707 aaKnown RBP eCLIP9.62□□□□□ -0.87
CAPN3-213ENST00000565173 HOXA11P31270 313 aaPredicted RBP9.62□□□□□ -0.87
CAPN3-213ENST00000565173 AFF1P51825 1210 aaKnown RBP9.62□□□□□ -0.87
CAPN3-213ENST00000565173 SPIRE1Q08AE8 756 aa9.62□□□□□ -0.87
CAPN3-213ENST00000565173 LONRF3Q496Y0 759 aa9.62□□□□□ -0.87
CAPN3-213ENST00000565173 TWF2Q6IBS0 349 aaKnown RBP9.62□□□□□ -0.87
CAPN3-213ENST00000565173 CPLX2Q6PUV4 134 aaKnown RBP9.62□□□□□ -0.87
CAPN3-213ENST00000565173 AGMOQ6ZNB7 445 aa9.62□□□□□ -0.87
CAPN3-213ENST00000565173 MRPL10Q7Z7H8 261 aaKnown RBP9.62□□□□□ -0.87
CAPN3-213ENST00000565173 NEK8Q86SG6 692 aa9.62□□□□□ -0.87
CAPN3-213ENST00000565173 PRPF31Q8WWY3 499 aaKnown RBP9.62□□□□□ -0.87
CAPN3-213ENST00000565173 PBXIP1Q96AQ6 731 aa9.62□□□□□ -0.87
CAPN3-213ENST00000565173 IGSF21Q96ID5 467 aa9.62□□□□□ -0.87
CAPN3-213ENST00000565173 NLRP4Q96MN2 994 aa9.62□□□□□ -0.87
CAPN3-213ENST00000565173 VN1R3Q9BXE9 311 aa9.62□□□□□ -0.87
CAPN3-213ENST00000565173 INO80BQ9C086 356 aaPredicted RBP9.62□□□□□ -0.87
CAPN3-213ENST00000565173 ZBP1Q9H171 429 aa9.62□□□□□ -0.87
CAPN3-213ENST00000565173 ADAM7Q9H2U9 754 aa9.62□□□□□ -0.87
CAPN3-213ENST00000565173 MINDY3Q9H8M7 445 aa9.62□□□□□ -0.87
CAPN3-213ENST00000565173 TBC1D13Q9NVG8 400 aa9.62□□□□□ -0.87
CAPN3-213ENST00000565173 RGL1Q9NZL6 768 aa9.62□□□□□ -0.87
CAPN3-213ENST00000565173 PIN4Q9Y237 131 aaKnown RBP9.62□□□□□ -0.87
CAPN3-213ENST00000565173 CFAP54Q96N23 3096 aa9.62□□□□□ -0.87
CAPN3-213ENST00000565173 STK36Q9NRP7 1315 aa9.61□□□□□ -0.87
CAPN3-213ENST00000565173 ZBTB39O15060 712 aa9.61□□□□□ -0.87
CAPN3-213ENST00000565173 TBX3O15119 743 aa9.61□□□□□ -0.87
CAPN3-213ENST00000565173 CCNT1O60563 726 aaKnown RBP9.61□□□□□ -0.87
CAPN3-213ENST00000565173 ZC3H11AO75152 810 aaKnown RBP eCLIP9.61□□□□□ -0.87
CAPN3-213ENST00000565173 DDHD2O94830 711 aa9.61□□□□□ -0.87
CAPN3-213ENST00000565173 SRGAP2BP0DMP2 458 aa9.61□□□□□ -0.87
CAPN3-213ENST00000565173 CTSAP10619 480 aa9.61□□□□□ -0.87
CAPN3-213ENST00000565173 SKIP12755 728 aa9.61□□□□□ -0.87
CAPN3-213ENST00000565173 FDPSP14324 419 aaKnown RBP9.61□□□□□ -0.87
CAPN3-213ENST00000565173 GCFC2P16383 781 aaKnown RBP9.61□□□□□ -0.87
CAPN3-213ENST00000565173 MRE11P49959 708 aa9.61□□□□□ -0.87
CAPN3-213ENST00000565173 SIGLEC14Q08ET2 396 aa9.61□□□□□ -0.87
CAPN3-213ENST00000565173 EPHA7Q15375 998 aa9.61□□□□□ -0.87
CAPN3-213ENST00000565173 PTPN21Q16825 1174 aa9.61□□□□□ -0.87
CAPN3-213ENST00000565173 NOMO2Q5JPE7 1267 aa9.61□□□□□ -0.87
CAPN3-213ENST00000565173 UBXN11Q5T124 520 aa9.61□□□□□ -0.87
CAPN3-213ENST00000565173 KANK3Q6NY19 840 aa9.61□□□□□ -0.87
CAPN3-213ENST00000565173 GLB1LQ6UWU2 654 aa9.61□□□□□ -0.87
CAPN3-213ENST00000565173 PIK3AP1Q6ZUJ8 805 aa9.61□□□□□ -0.87
CAPN3-213ENST00000565173 CATSPER4Q7RTX7 472 aa9.61□□□□□ -0.87
CAPN3-213ENST00000565173 DDX53Q86TM3 631 aaKnown RBP9.61□□□□□ -0.87
CAPN3-213ENST00000565173 ZNF280BQ86YH2 543 aa9.61□□□□□ -0.87
CAPN3-213ENST00000565173 C4orf19Q8IY42 314 aa9.61□□□□□ -0.87
CAPN3-213ENST00000565173 VPS52Q8N1B4 723 aa9.61□□□□□ -0.87
CAPN3-213ENST00000565173 PRSS33Q8NF86 280 aa9.61□□□□□ -0.87
CAPN3-213ENST00000565173 FEZF2Q8TBJ5 459 aa9.61□□□□□ -0.87
CAPN3-213ENST00000565173 SLC22A17Q8WUG5 538 aa9.61□□□□□ -0.87
CAPN3-213ENST00000565173 AUTS2Q8WXX7 1259 aa9.61□□□□□ -0.87
CAPN3-213ENST00000565173 RSPH1Q8WYR4 309 aa9.61□□□□□ -0.87
CAPN3-213ENST00000565173 CASP10Q92851 521 aa9.61□□□□□ -0.87
CAPN3-213ENST00000565173 TNFRSF25Q93038 417 aa9.61□□□□□ -0.87
CAPN3-213ENST00000565173 TMEM143Q96AN5 459 aa9.61□□□□□ -0.87
CAPN3-213ENST00000565173 CEP170P1Q96L14 293 aa9.61□□□□□ -0.87
CAPN3-213ENST00000565173 JPH2Q9BR39 696 aaPredicted RBP9.61□□□□□ -0.87
CAPN3-213ENST00000565173 SLKQ9H2G2 1235 aaPredicted RBP9.61□□□□□ -0.87
CAPN3-213ENST00000565173 AGPAT5Q9NUQ2 364 aa9.61□□□□□ -0.87
CAPN3-213ENST00000565173 DNAJB4Q9UDY4 337 aa9.61□□□□□ -0.87
CAPN3-213ENST00000565173 PCDHB2Q9Y5E7 798 aa9.61□□□□□ -0.87
CAPN3-213ENST00000565173 COL4A3BPQ9Y5P4 624 aa9.61□□□□□ -0.87
CAPN3-213ENST00000565173 IRAK3Q9Y616 596 aa9.61□□□□□ -0.87
CAPN3-213ENST00000565173 CCDC194A0A1B0GVG4 234 aa9.6□□□□□ -0.87
CAPN3-213ENST00000565173 FAM205CA6NFA0 338 aa9.6□□□□□ -0.87
CAPN3-213ENST00000565173 LILRB3O75022 631 aa9.6□□□□□ -0.87
CAPN3-213ENST00000565173 CDKL5O76039 1030 aa9.6□□□□□ -0.87
CAPN3-213ENST00000565173 SLITRK3O94933 977 aa9.6□□□□□ -0.87
CAPN3-213ENST00000565173 NEFLP07196 543 aa9.6□□□□□ -0.87
CAPN3-213ENST00000565173 SRGAP2CP0DJJ0 459 aa9.6□□□□□ -0.87
CAPN3-213ENST00000565173 EPCAMP16422 314 aa9.6□□□□□ -0.87
CAPN3-213ENST00000565173 SP100P23497 879 aaPredicted RBP9.6□□□□□ -0.87
CAPN3-213ENST00000565173 YWHABP31946 246 aaKnown RBP9.6□□□□□ -0.87
CAPN3-213ENST00000565173 SLC11A1P49279 550 aa9.6□□□□□ -0.87
CAPN3-213ENST00000565173 RAB27AP51159 221 aa9.6□□□□□ -0.87
CAPN3-213ENST00000565173 POLGP54098 1239 aaPredicted RBP9.6□□□□□ -0.87
CAPN3-213ENST00000565173 ITIH3Q06033 890 aa9.6□□□□□ -0.87
CAPN3-213ENST00000565173 LAMTOR4Q0VGL1 99 aa9.6□□□□□ -0.87
CAPN3-213ENST00000565173 TPRNQ4KMQ1 711 aa9.6□□□□□ -0.87
CAPN3-213ENST00000565173 SRGAP1Q7Z6B7 1085 aa9.6□□□□□ -0.87
CAPN3-213ENST00000565173 POTEDQ86YR6 584 aa9.6□□□□□ -0.87
CAPN3-213ENST00000565173 FBXL6Q8N531 539 aa9.6□□□□□ -0.87
CAPN3-213ENST00000565173 C12orf76Q8N812 135 aaPredicted RBP9.6□□□□□ -0.87
CAPN3-213ENST00000565173 SLC7A3Q8WY07 619 aa9.6□□□□□ -0.87
CAPN3-213ENST00000565173 TMEM169Q96HH4 297 aa9.6□□□□□ -0.87
CAPN3-213ENST00000565173 DYDC2Q96IM9 177 aa9.6□□□□□ -0.87
CAPN3-213ENST00000565173 PHOX2BQ99453 314 aa9.6□□□□□ -0.87
CAPN3-213ENST00000565173 HSD17B14Q9BPX1 270 aa9.6□□□□□ -0.87
CAPN3-213ENST00000565173 LXNQ9BS40 222 aa9.6□□□□□ -0.87
CAPN3-213ENST00000565173 POMKQ9H5K3 350 aa9.6□□□□□ -0.87
CAPN3-213ENST00000565173 PPME1Q9Y570 386 aa9.6□□□□□ -0.87
CAPN3-213ENST00000565173 WDR87Q6ZQQ6 2873 aa9.59□□□□□ -0.87
CAPN3-213ENST00000565173 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.59□□□□□ -0.87
CAPN3-213ENST00000565173 C2CD4DB7Z1M9 353 aa9.59□□□□□ -0.87
CAPN3-213ENST00000565173 ASAP2O43150 1006 aa9.59□□□□□ -0.87
CAPN3-213ENST00000565173 DKC1O60832 514 aaKnown RBP eCLIP9.59□□□□□ -0.87
CAPN3-213ENST00000565173 WEE2P0C1S8 567 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms