RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 NINJ1Q92982 152 aa6.28□□□□□ -1.4
CHD9-212ENST00000564641 ZNF512Q96ME7 567 aaPredicted RBP6.28□□□□□ -1.4
CHD9-212ENST00000564641 UIMC1Q96RL1 719 aa6.28□□□□□ -1.4
CHD9-212ENST00000564641 MYL10Q9BUA6 226 aa6.28□□□□□ -1.4
CHD9-212ENST00000564641 KANSL2Q9H9L4 492 aa6.28□□□□□ -1.4
CHD9-212ENST00000564641 ST20-MTHFSA0A0A6YYL1 179 aa6.27□□□□□ -1.41
CHD9-212ENST00000564641 OVOL3O00110 214 aa6.27□□□□□ -1.41
CHD9-212ENST00000564641 HNRNPLP14866 589 aaKnown RBP eCLIP6.27□□□□□ -1.41
CHD9-212ENST00000564641 GNAT2P19087 354 aa6.27□□□□□ -1.41
CHD9-212ENST00000564641 DSG1Q02413 1049 aa6.27□□□□□ -1.41
CHD9-212ENST00000564641 SART3Q15020 963 aaKnown RBP6.27□□□□□ -1.41
CHD9-212ENST00000564641 SMN1Q16637 294 aaKnown RBP6.27□□□□□ -1.41
CHD9-212ENST00000564641 CCDC178Q5BJE1 867 aa6.27□□□□□ -1.41
CHD9-212ENST00000564641 Q6ZRM9 215 aa6.27□□□□□ -1.41
CHD9-212ENST00000564641 ESPNLQ6ZVH7 1005 aa6.27□□□□□ -1.41
CHD9-212ENST00000564641 APBB1IPQ7Z5R6 666 aaPredicted RBP6.27□□□□□ -1.41
CHD9-212ENST00000564641 NPM2Q86SE8 214 aaKnown RBP6.27□□□□□ -1.41
CHD9-212ENST00000564641 LRRTM3Q86VH5 581 aa6.27□□□□□ -1.41
CHD9-212ENST00000564641 UNC5BQ8IZJ1 945 aa6.27□□□□□ -1.41
CHD9-212ENST00000564641 AHI1Q8N157 1196 aa6.27□□□□□ -1.41
CHD9-212ENST00000564641 PPM1KQ8N3J5 372 aa6.27□□□□□ -1.41
CHD9-212ENST00000564641 MDGA1Q8NFP4 955 aa6.27□□□□□ -1.41
CHD9-212ENST00000564641 PPP1R14CQ8TAE6 165 aa6.27□□□□□ -1.41
CHD9-212ENST00000564641 RTF1Q92541 710 aaKnown RBP6.27□□□□□ -1.41
CHD9-212ENST00000564641 RNPC3Q96LT9 517 aaKnown RBP6.27□□□□□ -1.41
CHD9-212ENST00000564641 ZMAT4Q9H898 229 aa6.27□□□□□ -1.41
CHD9-212ENST00000564641 CCDC180Q9P1Z9 1646 aa6.27□□□□□ -1.41
CHD9-212ENST00000564641 XDHP47989 1333 aa6.26□□□□□ -1.41
CHD9-212ENST00000564641 A0A087X1B8 175 aa6.26□□□□□ -1.41
CHD9-212ENST00000564641 KPNA6O60684 536 aa6.26□□□□□ -1.41
CHD9-212ENST00000564641 GPR15P49685 360 aa6.26□□□□□ -1.41
CHD9-212ENST00000564641 INHBEP58166 350 aa6.26□□□□□ -1.41
CHD9-212ENST00000564641 TOB2Q14106 344 aaPredicted RBP6.26□□□□□ -1.41
CHD9-212ENST00000564641 DCAF17Q5H9S7 520 aaPredicted RBP6.26□□□□□ -1.41
CHD9-212ENST00000564641 NAIF1Q69YI7 327 aaPredicted RBP6.26□□□□□ -1.41
CHD9-212ENST00000564641 MRGPRGQ86SM5 289 aa6.26□□□□□ -1.41
CHD9-212ENST00000564641 ULK2Q8IYT8 1036 aa6.26□□□□□ -1.41
CHD9-212ENST00000564641 CDYL2Q8N8U2 506 aa6.26□□□□□ -1.41
CHD9-212ENST00000564641 ATXN2LQ8WWM7 1075 aaKnown RBP6.26□□□□□ -1.41
CHD9-212ENST00000564641 PCDHB6Q9Y5E3 794 aa6.26□□□□□ -1.41
CHD9-212ENST00000564641 MYPNQ86TC9 1320 aa6.25□□□□□ -1.41
CHD9-212ENST00000564641 NRP2O60462 931 aa6.25□□□□□ -1.41
CHD9-212ENST00000564641 KPNA1P52294 538 aaPredicted RBP6.25□□□□□ -1.41
CHD9-212ENST00000564641 RABGGTBP53611 331 aa6.25□□□□□ -1.41
CHD9-212ENST00000564641 PHC1P78364 1004 aa6.25□□□□□ -1.41
CHD9-212ENST00000564641 RABL3Q5HYI8 236 aa6.25□□□□□ -1.41
CHD9-212ENST00000564641 METTL24Q5JXM2 366 aa6.25□□□□□ -1.41
CHD9-212ENST00000564641 UNQ6494/PRO21346Q6UXR6 183 aa6.25□□□□□ -1.41
CHD9-212ENST00000564641 ST8SIA2Q92186 375 aa6.25□□□□□ -1.41
CHD9-212ENST00000564641 LARP4BQ92615 738 aaKnown RBP6.25□□□□□ -1.41
CHD9-212ENST00000564641 HAS1Q92839 578 aa6.25□□□□□ -1.41
CHD9-212ENST00000564641 FERMT2Q96AC1 680 aa6.25□□□□□ -1.41
CHD9-212ENST00000564641 CLIP3Q96DZ5 547 aa6.25□□□□□ -1.41
CHD9-212ENST00000564641 MNTQ99583 582 aa6.25□□□□□ -1.41
CHD9-212ENST00000564641 PDCD2LQ9BRP1 358 aa6.25□□□□□ -1.41
CHD9-212ENST00000564641 WNT8AQ9H1J5 351 aa6.25□□□□□ -1.41
CHD9-212ENST00000564641 IKZF4Q9H2S9 585 aa6.25□□□□□ -1.41
CHD9-212ENST00000564641 SLC2A4RGQ9NR83 387 aa6.25□□□□□ -1.41
CHD9-212ENST00000564641 C11orf21Q9P2W6 132 aa6.25□□□□□ -1.41
CHD9-212ENST00000564641 NCDNQ9UBB6 729 aa6.25□□□□□ -1.41
CHD9-212ENST00000564641 PLAAQ9Y263 795 aa6.25□□□□□ -1.41
CHD9-212ENST00000564641 CD2APQ9Y5K6 639 aa6.25□□□□□ -1.41
CHD9-212ENST00000564641 A0A0A6YYK5 440 aaPredicted RBP6.24□□□□□ -1.41
CHD9-212ENST00000564641 KLRG2A4D1S0 409 aaPredicted RBP6.24□□□□□ -1.41
CHD9-212ENST00000564641 TMEM191CA6NGB0 347 aa6.24□□□□□ -1.41
CHD9-212ENST00000564641 GAAP10253 952 aa6.24□□□□□ -1.41
CHD9-212ENST00000564641 XPAP23025 273 aaPredicted RBP6.24□□□□□ -1.41
CHD9-212ENST00000564641 LSP1P33241 339 aa6.24□□□□□ -1.41
CHD9-212ENST00000564641 SCNN1BP51168 640 aa6.24□□□□□ -1.41
CHD9-212ENST00000564641 NIM1KQ8IY84 436 aa6.24□□□□□ -1.41
CHD9-212ENST00000564641 ELOA2Q8IYF1 753 aaPredicted RBP6.24□□□□□ -1.41
CHD9-212ENST00000564641 SLC25A43Q8WUT9 341 aaPredicted RBP6.24□□□□□ -1.41
CHD9-212ENST00000564641 RSAD2Q8WXG1 361 aa6.24□□□□□ -1.41
CHD9-212ENST00000564641 SOX7Q9BT81 388 aa6.24□□□□□ -1.41
CHD9-212ENST00000564641 THG1LQ9NWX6 298 aaKnown RBP6.24□□□□□ -1.41
CHD9-212ENST00000564641 H2AFY2Q9P0M6 372 aaPredicted RBP6.24□□□□□ -1.41
CHD9-212ENST00000564641 MSRAQ9UJ68 235 aa6.24□□□□□ -1.41
CHD9-212ENST00000564641 RECQL4O94761 1208 aa6.23□□□□□ -1.41
CHD9-212ENST00000564641 ALDH1A2O94788 518 aa6.23□□□□□ -1.41
CHD9-212ENST00000564641 PCDH8O95206 1070 aa6.23□□□□□ -1.41
CHD9-212ENST00000564641 WNT3AP56704 352 aa6.23□□□□□ -1.41
CHD9-212ENST00000564641 NRG3P56975 720 aa6.23□□□□□ -1.41
CHD9-212ENST00000564641 SLC25A3Q00325 362 aa6.23□□□□□ -1.41
CHD9-212ENST00000564641 C11orf74Q86VG3 221 aa6.23□□□□□ -1.41
CHD9-212ENST00000564641 LDLRAD3Q86YD5 345 aa6.23□□□□□ -1.41
CHD9-212ENST00000564641 SYNE4Q8N205 404 aa6.23□□□□□ -1.41
CHD9-212ENST00000564641 NXPE1Q8N323 547 aa6.23□□□□□ -1.41
CHD9-212ENST00000564641 ZNF610Q8N9Z0 462 aa6.23□□□□□ -1.41
CHD9-212ENST00000564641 CHTF18Q8WVB6 975 aa6.23□□□□□ -1.41
CHD9-212ENST00000564641 FEZ1Q99689 392 aa6.23□□□□□ -1.41
CHD9-212ENST00000564641 MTFR1LQ9H019 292 aa6.23□□□□□ -1.41
CHD9-212ENST00000564641 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.23□□□□□ -1.41
CHD9-212ENST00000564641 KCNG1Q9UIX4 513 aa6.23□□□□□ -1.41
CHD9-212ENST00000564641 CNNM4Q6P4Q7 775 aa6.22□□□□□ -1.41
CHD9-212ENST00000564641 GLB1L3Q8NCI6 653 aaPredicted RBP6.22□□□□□ -1.41
CHD9-212ENST00000564641 SMC1BQ8NDV3 1235 aa6.22□□□□□ -1.41
CHD9-212ENST00000564641 OR2W6PQ8NHA6 318 aa6.22□□□□□ -1.41
CHD9-212ENST00000564641 LENG9Q96B70 501 aa6.22□□□□□ -1.41
CHD9-212ENST00000564641 FANCLQ9NW38 375 aa6.22□□□□□ -1.41
CHD9-212ENST00000564641 TRPS1Q9UHF7 1281 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms