RNA–Protein interactions for RNA: ENST00000564634.5

CYLD-208, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 3

Gene CYLD, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-208ENST00000564634 PCDHA12Q9UN75 941 aa28.22■■■□□ 2.11
CYLD-208ENST00000564634 PDGFBP01127 241 aaPredicted RBP28.21■■■□□ 2.11
CYLD-208ENST00000564634 TRAPPC10P48553 1259 aa28.21■■■□□ 2.11
CYLD-208ENST00000564634 PLCB3Q01970 1234 aa28.21■■■□□ 2.11
CYLD-208ENST00000564634 ORC2Q13416 577 aaPredicted RBP28.21■■■□□ 2.11
CYLD-208ENST00000564634 EPHA7Q15375 998 aa28.21■■■□□ 2.11
CYLD-208ENST00000564634 KCNT2Q6UVM3 1135 aa28.21■■■□□ 2.11
CYLD-208ENST00000564634 FAM43BQ6ZT52 329 aaPredicted RBP28.21■■■□□ 2.11
CYLD-208ENST00000564634 RNF169Q8NCN4 708 aa28.21■■■□□ 2.11
CYLD-208ENST00000564634 ZNF668Q96K58 619 aaPredicted RBP28.21■■■□□ 2.11
CYLD-208ENST00000564634 ZNF558Q96NG5 402 aa28.21■■■□□ 2.11
CYLD-208ENST00000564634 MTMR9Q96QG7 549 aa28.21■■■□□ 2.11
CYLD-208ENST00000564634 NOL7Q9UMY1 257 aaKnown RBP28.21■■■□□ 2.11
CYLD-208ENST00000564634 AKT3Q9Y243 479 aa28.21■■■□□ 2.11
CYLD-208ENST00000564634 CFAP54Q96N23 3096 aa28.21■■■□□ 2.11
CYLD-208ENST00000564634 DKC1O60832 514 aaKnown RBP eCLIP28.2■■■□□ 2.1
CYLD-208ENST00000564634 AVPR2P30518 371 aa28.2■■■□□ 2.1
CYLD-208ENST00000564634 MCM7P33993 719 aa28.2■■■□□ 2.1
CYLD-208ENST00000564634 PSMC5P62195 406 aa28.2■■■□□ 2.1
CYLD-208ENST00000564634 XKR3Q5GH77 459 aa28.2■■■□□ 2.1
CYLD-208ENST00000564634 ABI1Q8IZP0 508 aa28.2■■■□□ 2.1
CYLD-208ENST00000564634 LRRC43Q8N309 656 aa28.2■■■□□ 2.1
CYLD-208ENST00000564634 MAGEB2O15479 319 aa28.19■■■□□ 2.1
CYLD-208ENST00000564634 P4HBP07237 508 aaKnown RBP28.19■■■□□ 2.1
CYLD-208ENST00000564634 NLRP11P59045 1033 aaKnown RBP28.19■■■□□ 2.1
CYLD-208ENST00000564634 SPIRE1Q08AE8 756 aa28.19■■■□□ 2.1
CYLD-208ENST00000564634 TMC7Q7Z402 723 aa28.19■■■□□ 2.1
CYLD-208ENST00000564634 LRRC71Q8N4P6 559 aa28.19■■■□□ 2.1
CYLD-208ENST00000564634 H3BQV1 296 aa28.18■■■□□ 2.1
CYLD-208ENST00000564634 HOXA2O43364 376 aa28.18■■■□□ 2.1
CYLD-208ENST00000564634 GFRA3O60609 400 aa28.18■■■□□ 2.1
CYLD-208ENST00000564634 PPM1AP35813 382 aa28.18■■■□□ 2.1
CYLD-208ENST00000564634 QARSP47897 775 aaKnown RBP28.18■■■□□ 2.1
CYLD-208ENST00000564634 ZNF174Q15697 407 aa28.18■■■□□ 2.1
CYLD-208ENST00000564634 TTC38Q5R3I4 469 aa28.18■■■□□ 2.1
CYLD-208ENST00000564634 NCAPH2Q6IBW4 605 aa28.18■■■□□ 2.1
CYLD-208ENST00000564634 MAP7D2Q96T17 732 aa28.18■■■□□ 2.1
CYLD-208ENST00000564634 NIFKQ9BYG3 293 aaKnown RBP28.18■■■□□ 2.1
CYLD-208ENST00000564634 TTC12Q9H892 705 aaPredicted RBP28.18■■■□□ 2.1
CYLD-208ENST00000564634 NGRNQ9NPE2 291 aaKnown RBP28.18■■■□□ 2.1
CYLD-208ENST00000564634 STBD1O95210 358 aa28.17■■■□□ 2.1
CYLD-208ENST00000564634 CA8P35219 290 aa28.17■■■□□ 2.1
CYLD-208ENST00000564634 TXKP42681 527 aa28.17■■■□□ 2.1
CYLD-208ENST00000564634 LARP1BQ659C4 914 aaKnown RBP28.17■■■□□ 2.1
CYLD-208ENST00000564634 MCTP1Q6DN14 999 aa28.17■■■□□ 2.1
CYLD-208ENST00000564634 ECHDC2Q86YB7 292 aa28.17■■■□□ 2.1
CYLD-208ENST00000564634 ATOH1Q92858 354 aaPredicted RBP28.17■■■□□ 2.1
CYLD-208ENST00000564634 TMEM60Q9H2L4 133 aa28.17■■■□□ 2.1
CYLD-208ENST00000564634 ZSCAN20P17040 1043 aaPredicted RBP28.16■■■□□ 2.1
CYLD-208ENST00000564634 HOXB8P17481 243 aaPredicted RBP28.16■■■□□ 2.1
CYLD-208ENST00000564634 KRT17Q04695 432 aa28.16■■■□□ 2.1
CYLD-208ENST00000564634 TARBP2Q15633 366 aaKnown RBP28.16■■■□□ 2.1
CYLD-208ENST00000564634 CLLU1OSQ5K130 101 aa28.16■■■□□ 2.1
CYLD-208ENST00000564634 EFCAB12Q6NXP0 572 aa28.16■■■□□ 2.1
CYLD-208ENST00000564634 KREMEN2Q8NCW0 462 aa28.16■■■□□ 2.1
CYLD-208ENST00000564634 CASP10Q92851 521 aa28.16■■■□□ 2.1
CYLD-208ENST00000564634 ADAMTS10Q9H324 1103 aa28.16■■■□□ 2.1
CYLD-208ENST00000564634 SPG21Q9NZD8 308 aa28.16■■■□□ 2.1
CYLD-208ENST00000564634 SEPT9Q9UHD8 586 aaPredicted RBP28.16■■■□□ 2.1
CYLD-208ENST00000564634 DDX11L8A8MPP1 907 aa28.15■■■□□ 2.1
CYLD-208ENST00000564634 SNX27Q96L92 541 aa28.15■■■□□ 2.1
CYLD-208ENST00000564634 RIPOR3Q96MK2 946 aa28.15■■■□□ 2.1
CYLD-208ENST00000564634 SCLT1Q96NL6 688 aa28.15■■■□□ 2.1
CYLD-208ENST00000564634 POMKQ9H5K3 350 aa28.15■■■□□ 2.1
CYLD-208ENST00000564634 NR2E1Q9Y466 385 aa28.15■■■□□ 2.1
CYLD-208ENST00000564634 HCFC2Q9Y5Z7 792 aa28.15■■■□□ 2.1
CYLD-208ENST00000564634 C2CD4DB7Z1M9 353 aa28.14■■■□□ 2.1
CYLD-208ENST00000564634 H0Y858 1186 aa28.14■■■□□ 2.1
CYLD-208ENST00000564634 K7ELQ4 463 aaPredicted RBP28.14■■■□□ 2.1
CYLD-208ENST00000564634 FGFR4P22455 802 aa28.14■■■□□ 2.1
CYLD-208ENST00000564634 TMOD1P28289 359 aa28.14■■■□□ 2.1
CYLD-208ENST00000564634 TBC1D8BQ0IIM8 1120 aa28.14■■■□□ 2.1
CYLD-208ENST00000564634 SMC1AQ14683 1233 aaKnown RBP28.14■■■□□ 2.1
CYLD-208ENST00000564634 TPRNQ4KMQ1 711 aa28.14■■■□□ 2.1
CYLD-208ENST00000564634 C4orf19Q8IY42 314 aa28.14■■■□□ 2.1
CYLD-208ENST00000564634 LINC01465Q8N7H1 131 aa28.14■■■□□ 2.1
CYLD-208ENST00000564634 HELQQ8TDG4 1101 aa28.14■■■□□ 2.1
CYLD-208ENST00000564634 DYDC2Q96IM9 177 aa28.14■■■□□ 2.1
CYLD-208ENST00000564634 SMOC2Q9H3U7 446 aa28.14■■■□□ 2.1
CYLD-208ENST00000564634 WEE2P0C1S8 567 aa28.13■■■□□ 2.09
CYLD-208ENST00000564634 OR52Z1P0C646 297 aa28.13■■■□□ 2.09
CYLD-208ENST00000564634 EIF4BP23588 611 aaKnown RBP28.13■■■□□ 2.09
CYLD-208ENST00000564634 MTERF2Q49AM1 385 aa28.13■■■□□ 2.09
CYLD-208ENST00000564634 SLC39A11Q8N1S5 342 aa28.13■■■□□ 2.09
CYLD-208ENST00000564634 SNX21Q969T3 373 aa28.13■■■□□ 2.09
CYLD-208ENST00000564634 INTS4Q96HW7 963 aaKnown RBP28.13■■■□□ 2.09
CYLD-208ENST00000564634 EIF2AK1Q9BQI3 630 aaKnown RBP28.13■■■□□ 2.09
CYLD-208ENST00000564634 LXNQ9BS40 222 aa28.13■■■□□ 2.09
CYLD-208ENST00000564634 ZSWIM4Q9H7M6 989 aa28.13■■■□□ 2.09
CYLD-208ENST00000564634 RGL1Q9NZL6 768 aa28.13■■■□□ 2.09
CYLD-208ENST00000564634 C2orf71A6NGG8 1288 aa28.12■■■□□ 2.09
CYLD-208ENST00000564634 NT5C1B-RDH14C9J2C7 533 aa28.12■■■□□ 2.09
CYLD-208ENST00000564634 TOB1P50616 345 aaPredicted RBP28.12■■■□□ 2.09
CYLD-208ENST00000564634 CES5AQ6NT32 575 aa28.12■■■□□ 2.09
CYLD-208ENST00000564634 ANO5Q75V66 913 aa28.12■■■□□ 2.09
CYLD-208ENST00000564634 CEP89Q96ST8 783 aa28.12■■■□□ 2.09
CYLD-208ENST00000564634 CACNA1HO95180 2353 aa28.11■■■□□ 2.09
CYLD-208ENST00000564634 SLITRK3O94933 977 aa28.11■■■□□ 2.09
CYLD-208ENST00000564634 BRD1O95696 1058 aa28.11■■■□□ 2.09
CYLD-208ENST00000564634 MTMR3Q13615 1198 aa28.11■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms