RNA–Protein interactions for RNA: ENST00000564404.5

TRAPPC2L-207, Transcript of trafficking protein particle complex 2 like, humanhuman

TSL 3

Gene TRAPPC2L, Length 915 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2L-207ENST00000564404 RARRES1P49788 294 aa13.49□□□□□ -0.25
TRAPPC2L-207ENST00000564404 ORC2Q13416 577 aaPredicted RBP13.49□□□□□ -0.25
TRAPPC2L-207ENST00000564404 NBR1Q14596 966 aa13.49□□□□□ -0.25
TRAPPC2L-207ENST00000564404 CLUL1Q15846 466 aa13.49□□□□□ -0.25
TRAPPC2L-207ENST00000564404 CSPP1Q1MSJ5 1256 aa13.49□□□□□ -0.25
TRAPPC2L-207ENST00000564404 KCNT2Q6UVM3 1135 aa13.49□□□□□ -0.25
TRAPPC2L-207ENST00000564404 LRRC55Q6ZSA7 311 aa13.49□□□□□ -0.25
TRAPPC2L-207ENST00000564404 SRGAP1Q7Z6B7 1085 aa13.49□□□□□ -0.25
TRAPPC2L-207ENST00000564404 ADGRD2Q7Z7M1 963 aa13.49□□□□□ -0.25
TRAPPC2L-207ENST00000564404 RBM23Q86U06 439 aaKnown RBP13.49□□□□□ -0.25
TRAPPC2L-207ENST00000564404 ERMNQ8TAM6 284 aa13.49□□□□□ -0.25
TRAPPC2L-207ENST00000564404 TMX3Q96JJ7 454 aa13.49□□□□□ -0.25
TRAPPC2L-207ENST00000564404 ZNF558Q96NG5 402 aa13.49□□□□□ -0.25
TRAPPC2L-207ENST00000564404 TLR9Q9NR96 1032 aa13.49□□□□□ -0.25
TRAPPC2L-207ENST00000564404 AGPAT5Q9NUQ2 364 aa13.49□□□□□ -0.25
TRAPPC2L-207ENST00000564404 FAM105AQ9NUU6 356 aa13.49□□□□□ -0.25
TRAPPC2L-207ENST00000564404 PCDHGC5Q9Y5F6 944 aa13.49□□□□□ -0.25
TRAPPC2L-207ENST00000564404 LINC01565O15544 149 aa13.48□□□□□ -0.25
TRAPPC2L-207ENST00000564404 MED24O75448 989 aa13.48□□□□□ -0.25
TRAPPC2L-207ENST00000564404 CD2BP2O95400 341 aaKnown RBP13.48□□□□□ -0.25
TRAPPC2L-207ENST00000564404 SPATA31C1P0DKV0 1188 aa13.48□□□□□ -0.25
TRAPPC2L-207ENST00000564404 SKIP12755 728 aa13.48□□□□□ -0.25
TRAPPC2L-207ENST00000564404 NRIP1P48552 1158 aa13.48□□□□□ -0.25
TRAPPC2L-207ENST00000564404 TRAPPC10P48553 1259 aa13.48□□□□□ -0.25
TRAPPC2L-207ENST00000564404 NDUFV1P49821 464 aa13.48□□□□□ -0.25
TRAPPC2L-207ENST00000564404 RAB27AP51159 221 aa13.48□□□□□ -0.25
TRAPPC2L-207ENST00000564404 UBE3AQ05086 875 aa13.48□□□□□ -0.25
TRAPPC2L-207ENST00000564404 TFDP1Q14186 410 aa13.48□□□□□ -0.25
TRAPPC2L-207ENST00000564404 MXD4Q14582 209 aaPredicted RBP13.48□□□□□ -0.25
TRAPPC2L-207ENST00000564404 MCTP1Q6DN14 999 aa13.48□□□□□ -0.25
TRAPPC2L-207ENST00000564404 MAEAQ7L5Y9 396 aa13.48□□□□□ -0.25
TRAPPC2L-207ENST00000564404 CATSPER3Q86XQ3 398 aa13.48□□□□□ -0.25
TRAPPC2L-207ENST00000564404 MRPL9Q9BYD2 267 aaKnown RBP13.48□□□□□ -0.25
TRAPPC2L-207ENST00000564404 TUFT1Q9NNX1 390 aa13.48□□□□□ -0.25
TRAPPC2L-207ENST00000564404 INPP5FQ9Y2H2 1132 aa13.48□□□□□ -0.25
TRAPPC2L-207ENST00000564404 GRXCR2A6NFK2 248 aa13.47□□□□□ -0.25
TRAPPC2L-207ENST00000564404 MEIS3P2A8K0S8 358 aa13.47□□□□□ -0.25
TRAPPC2L-207ENST00000564404 INO80B-WBP1J3KQ70 363 aa13.47□□□□□ -0.25
TRAPPC2L-207ENST00000564404 ZC3H11AO75152 810 aaKnown RBP eCLIP13.47□□□□□ -0.25
TRAPPC2L-207ENST00000564404 TBX10O75333 385 aa13.47□□□□□ -0.25
TRAPPC2L-207ENST00000564404 U2AF2P26368 475 aaKnown RBP eCLIP13.47□□□□□ -0.25
TRAPPC2L-207ENST00000564404 PPM1AP35813 382 aa13.47□□□□□ -0.25
TRAPPC2L-207ENST00000564404 LTBRP36941 435 aa13.47□□□□□ -0.25
TRAPPC2L-207ENST00000564404 DLX2Q07687 328 aaPredicted RBP13.47□□□□□ -0.25
TRAPPC2L-207ENST00000564404 CAPSQ13938 189 aa13.47□□□□□ -0.25
TRAPPC2L-207ENST00000564404 COL19A1Q14993 1142 aa13.47□□□□□ -0.25
TRAPPC2L-207ENST00000564404 CTC1Q2NKJ3 1217 aa13.47□□□□□ -0.25
TRAPPC2L-207ENST00000564404 PLPP4Q5VZY2 271 aa13.47□□□□□ -0.25
TRAPPC2L-207ENST00000564404 POTEGQ6S5H5 508 aa13.47□□□□□ -0.25
TRAPPC2L-207ENST00000564404 GLB1LQ6UWU2 654 aa13.47□□□□□ -0.25
TRAPPC2L-207ENST00000564404 ASAP3Q8TDY4 903 aa13.47□□□□□ -0.25
TRAPPC2L-207ENST00000564404 TBC1D32Q96NH3 1257 aa13.47□□□□□ -0.25
TRAPPC2L-207ENST00000564404 TRAIPQ9BWF2 469 aa13.47□□□□□ -0.25
TRAPPC2L-207ENST00000564404 GBP3Q9H0R5 595 aa13.47□□□□□ -0.25
TRAPPC2L-207ENST00000564404 POLR3FQ9H1D9 316 aaPredicted RBP13.47□□□□□ -0.25
TRAPPC2L-207ENST00000564404 TLE6Q9H808 572 aa13.47□□□□□ -0.25
TRAPPC2L-207ENST00000564404 ENTPD7Q9NQZ7 604 aa13.47□□□□□ -0.25
TRAPPC2L-207ENST00000564404 SPG21Q9NZD8 308 aa13.47□□□□□ -0.25
TRAPPC2L-207ENST00000564404 PUF60Q9UHX1 559 aaKnown RBP13.47□□□□□ -0.25
TRAPPC2L-207ENST00000564404 PCDHB2Q9Y5E7 798 aa13.47□□□□□ -0.25
TRAPPC2L-207ENST00000564404 NT5C1B-RDH14C9J2C7 533 aa13.46□□□□□ -0.25
TRAPPC2L-207ENST00000564404 H3BQV1 296 aa13.46□□□□□ -0.25
TRAPPC2L-207ENST00000564404 PER2O15055 1255 aa13.46□□□□□ -0.25
TRAPPC2L-207ENST00000564404 XRCC6P12956 609 aaKnown RBP eCLIP13.46□□□□□ -0.25
TRAPPC2L-207ENST00000564404 RPA1P27694 616 aa13.46□□□□□ -0.25
TRAPPC2L-207ENST00000564404 GJB2P29033 226 aa13.46□□□□□ -0.25
TRAPPC2L-207ENST00000564404 ARL2P36404 184 aa13.46□□□□□ -0.25
TRAPPC2L-207ENST00000564404 ALDH7A1P49419 539 aaKnown RBP13.46□□□□□ -0.25
TRAPPC2L-207ENST00000564404 PTENP60484 403 aa13.46□□□□□ -0.25
TRAPPC2L-207ENST00000564404 ERVFC1P60507 584 aa13.46□□□□□ -0.25
TRAPPC2L-207ENST00000564404 KRT17Q04695 432 aa13.46□□□□□ -0.25
TRAPPC2L-207ENST00000564404 RNASELQ05823 741 aaKnown RBP13.46□□□□□ -0.25
TRAPPC2L-207ENST00000564404 PUS10Q3MIT2 529 aaKnown RBP13.46□□□□□ -0.25
TRAPPC2L-207ENST00000564404 HAUS3Q68CZ6 603 aa13.46□□□□□ -0.25
TRAPPC2L-207ENST00000564404 MRPS27Q92552 414 aaKnown RBP13.46□□□□□ -0.25
TRAPPC2L-207ENST00000564404 PGBD4Q96DM1 585 aa13.46□□□□□ -0.25
TRAPPC2L-207ENST00000564404 CPB2Q96IY4 423 aa13.46□□□□□ -0.25
TRAPPC2L-207ENST00000564404 NACC1Q96RE7 527 aa13.46□□□□□ -0.25
TRAPPC2L-207ENST00000564404 POLR3CQ9BUI4 534 aaPredicted RBP13.46□□□□□ -0.25
TRAPPC2L-207ENST00000564404 GPRC5CQ9NQ84 441 aa13.46□□□□□ -0.25
TRAPPC2L-207ENST00000564404 LRWD1Q9UFC0 647 aa13.46□□□□□ -0.25
TRAPPC2L-207ENST00000564404 FAM50BQ9Y247 325 aa13.46□□□□□ -0.25
TRAPPC2L-207ENST00000564404 PCDHB6Q9Y5E3 794 aa13.46□□□□□ -0.25
TRAPPC2L-207ENST00000564404 ARHGEF35A5YM69 484 aa13.45□□□□□ -0.26
TRAPPC2L-207ENST00000564404 LRRIQ4A6NIV6 560 aa13.45□□□□□ -0.26
TRAPPC2L-207ENST00000564404 TSPAN1O60635 241 aa13.45□□□□□ -0.26
TRAPPC2L-207ENST00000564404 ZNF623O75123 536 aa13.45□□□□□ -0.26
TRAPPC2L-207ENST00000564404 GLRA2P23416 452 aa13.45□□□□□ -0.26
TRAPPC2L-207ENST00000564404 HOXA11P31270 313 aaPredicted RBP13.45□□□□□ -0.26
TRAPPC2L-207ENST00000564404 SSTR3P32745 418 aaPredicted RBP13.45□□□□□ -0.26
TRAPPC2L-207ENST00000564404 CA8P35219 290 aa13.45□□□□□ -0.26
TRAPPC2L-207ENST00000564404 CCT6AP40227 531 aaKnown RBP13.45□□□□□ -0.26
TRAPPC2L-207ENST00000564404 MCM2P49736 904 aa13.45□□□□□ -0.26
TRAPPC2L-207ENST00000564404 TOB1P50616 345 aaPredicted RBP13.45□□□□□ -0.26
TRAPPC2L-207ENST00000564404 BCAR1P56945 870 aa13.45□□□□□ -0.26
TRAPPC2L-207ENST00000564404 PLCB3Q01970 1234 aa13.45□□□□□ -0.26
TRAPPC2L-207ENST00000564404 NCBP1Q09161 790 aaKnown RBP13.45□□□□□ -0.26
TRAPPC2L-207ENST00000564404 PTGDRQ13258 359 aa13.45□□□□□ -0.26
TRAPPC2L-207ENST00000564404 ADAM15Q13444 863 aa13.45□□□□□ -0.26
TRAPPC2L-207ENST00000564404 NOMO2Q5JPE7 1267 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms