RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 C4orf32Q8N8J7 132 aa22.23■■□□□ 1.15
SHCBP1-203ENST00000564272 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.23■■□□□ 1.15
SHCBP1-203ENST00000564272 TRAIPQ9BWF2 469 aa22.23■■□□□ 1.15
SHCBP1-203ENST00000564272 IGFLR1Q9H665 355 aa22.23■■□□□ 1.15
SHCBP1-203ENST00000564272 FAM105AQ9NUU6 356 aa22.23■■□□□ 1.15
SHCBP1-203ENST00000564272 PCDHB6Q9Y5E3 794 aa22.23■■□□□ 1.15
SHCBP1-203ENST00000564272 NCOR1O75376 2440 aa22.22■■□□□ 1.15
SHCBP1-203ENST00000564272 MEIS3P2A8K0S8 358 aa22.22■■□□□ 1.15
SHCBP1-203ENST00000564272 GJB2P29033 226 aa22.22■■□□□ 1.15
SHCBP1-203ENST00000564272 CAPSQ13938 189 aa22.22■■□□□ 1.15
SHCBP1-203ENST00000564272 MXD4Q14582 209 aaPredicted RBP22.22■■□□□ 1.15
SHCBP1-203ENST00000564272 ERMNQ8TAM6 284 aa22.22■■□□□ 1.15
SHCBP1-203ENST00000564272 POLR3CQ9BUI4 534 aaPredicted RBP22.22■■□□□ 1.15
SHCBP1-203ENST00000564272 POLR3FQ9H1D9 316 aaPredicted RBP22.22■■□□□ 1.15
SHCBP1-203ENST00000564272 KIF3AQ9Y496 699 aa22.22■■□□□ 1.15
SHCBP1-203ENST00000564272 LINC01565O15544 149 aa22.21■■□□□ 1.15
SHCBP1-203ENST00000564272 ARL2P36404 184 aa22.21■■□□□ 1.15
SHCBP1-203ENST00000564272 LTBRP36941 435 aa22.21■■□□□ 1.15
SHCBP1-203ENST00000564272 RAB27AP51159 221 aa22.21■■□□□ 1.15
SHCBP1-203ENST00000564272 CSPP1Q1MSJ5 1256 aa22.21■■□□□ 1.15
SHCBP1-203ENST00000564272 MCTP1Q6DN14 999 aa22.21■■□□□ 1.15
SHCBP1-203ENST00000564272 PTCRAQ6ISU1 281 aaPredicted RBP22.21■■□□□ 1.15
SHCBP1-203ENST00000564272 KCNT2Q6UVM3 1135 aa22.21■■□□□ 1.15
SHCBP1-203ENST00000564272 ZNF558Q96NG5 402 aa22.21■■□□□ 1.15
SHCBP1-203ENST00000564272 GPRC5CQ9NQ84 441 aa22.21■■□□□ 1.15
SHCBP1-203ENST00000564272 TLR9Q9NR96 1032 aa22.21■■□□□ 1.15
SHCBP1-203ENST00000564272 ERLIN2O94905 339 aa22.2■■□□□ 1.14
SHCBP1-203ENST00000564272 SKIP12755 728 aa22.2■■□□□ 1.14
SHCBP1-203ENST00000564272 XRCC6P12956 609 aaKnown RBP eCLIP22.2■■□□□ 1.14
SHCBP1-203ENST00000564272 IL9P15248 144 aa22.2■■□□□ 1.14
SHCBP1-203ENST00000564272 GLRA2P23416 452 aa22.2■■□□□ 1.14
SHCBP1-203ENST00000564272 RPA1P27694 616 aa22.2■■□□□ 1.14
SHCBP1-203ENST00000564272 HOXA11P31270 313 aaPredicted RBP22.2■■□□□ 1.14
SHCBP1-203ENST00000564272 MCM2P49736 904 aa22.2■■□□□ 1.14
SHCBP1-203ENST00000564272 FXR2P51116 673 aaKnown RBP eCLIP22.2■■□□□ 1.14
SHCBP1-203ENST00000564272 PTENP60484 403 aa22.2■■□□□ 1.14
SHCBP1-203ENST00000564272 UBE3AQ05086 875 aa22.2■■□□□ 1.14
SHCBP1-203ENST00000564272 PTGDRQ13258 359 aa22.2■■□□□ 1.14
SHCBP1-203ENST00000564272 TFDP1Q14186 410 aa22.2■■□□□ 1.14
SHCBP1-203ENST00000564272 CTC1Q2NKJ3 1217 aa22.2■■□□□ 1.14
SHCBP1-203ENST00000564272 UBXN11Q5T124 520 aa22.2■■□□□ 1.14
SHCBP1-203ENST00000564272 MAEAQ7L5Y9 396 aa22.2■■□□□ 1.14
SHCBP1-203ENST00000564272 MRPL9Q9BYD2 267 aaKnown RBP22.2■■□□□ 1.14
SHCBP1-203ENST00000564272 DBR1Q9UK59 544 aaKnown RBP22.2■■□□□ 1.14
SHCBP1-203ENST00000564272 INPP5FQ9Y2H2 1132 aa22.2■■□□□ 1.14
SHCBP1-203ENST00000564272 PCDHB2Q9Y5E7 798 aa22.2■■□□□ 1.14
SHCBP1-203ENST00000564272 INO80B-WBP1J3KQ70 363 aa22.19■■□□□ 1.14
SHCBP1-203ENST00000564272 NCK2O43639 380 aa22.19■■□□□ 1.14
SHCBP1-203ENST00000564272 TSPAN1O60635 241 aa22.19■■□□□ 1.14
SHCBP1-203ENST00000564272 TBX10O75333 385 aa22.19■■□□□ 1.14
SHCBP1-203ENST00000564272 NRIP1P48552 1158 aa22.19■■□□□ 1.14
SHCBP1-203ENST00000564272 ERVFC1P60507 584 aa22.19■■□□□ 1.14
SHCBP1-203ENST00000564272 DLX2Q07687 328 aaPredicted RBP22.19■■□□□ 1.14
SHCBP1-203ENST00000564272 CLUL1Q15846 466 aa22.19■■□□□ 1.14
SHCBP1-203ENST00000564272 HAUS3Q68CZ6 603 aa22.19■■□□□ 1.14
SHCBP1-203ENST00000564272 IFNLR1Q8IU57 520 aaPredicted RBP22.19■■□□□ 1.14
SHCBP1-203ENST00000564272 PPP2R3CQ969Q6 453 aa22.19■■□□□ 1.14
SHCBP1-203ENST00000564272 NACC1Q96RE7 527 aa22.19■■□□□ 1.14
SHCBP1-203ENST00000564272 ZNF623O75123 536 aa22.18■■□□□ 1.14
SHCBP1-203ENST00000564272 CCT6AP40227 531 aaKnown RBP22.18■■□□□ 1.14
SHCBP1-203ENST00000564272 MBTD1Q05BQ5 628 aa22.18■■□□□ 1.14
SHCBP1-203ENST00000564272 ECM1Q16610 540 aa22.18■■□□□ 1.14
SHCBP1-203ENST00000564272 GLB1LQ6UWU2 654 aa22.18■■□□□ 1.14
SHCBP1-203ENST00000564272 RBM23Q86U06 439 aaKnown RBP22.18■■□□□ 1.14
SHCBP1-203ENST00000564272 MICAL1Q8TDZ2 1067 aa22.18■■□□□ 1.14
SHCBP1-203ENST00000564272 MRPS27Q92552 414 aaKnown RBP22.18■■□□□ 1.14
SHCBP1-203ENST00000564272 CPB2Q96IY4 423 aa22.18■■□□□ 1.14
SHCBP1-203ENST00000564272 LRWD1Q9UFC0 647 aa22.18■■□□□ 1.14
SHCBP1-203ENST00000564272 SMC3Q9UQE7 1217 aa22.18■■□□□ 1.14
SHCBP1-203ENST00000564272 MUC3AQ02505 3323 aa22.17■■□□□ 1.14
SHCBP1-203ENST00000564272 GRXCR2A6NFK2 248 aa22.17■■□□□ 1.14
SHCBP1-203ENST00000564272 H3BQV1 296 aa22.17■■□□□ 1.14
SHCBP1-203ENST00000564272 FSCN2O14926 492 aa22.17■■□□□ 1.14
SHCBP1-203ENST00000564272 OFD1O75665 1012 aa22.17■■□□□ 1.14
SHCBP1-203ENST00000564272 PPM1AP35813 382 aa22.17■■□□□ 1.14
SHCBP1-203ENST00000564272 PLCB3Q01970 1234 aa22.17■■□□□ 1.14
SHCBP1-203ENST00000564272 POU5F1BQ06416 359 aa22.17■■□□□ 1.14
SHCBP1-203ENST00000564272 AMHR2Q16671 573 aa22.17■■□□□ 1.14
SHCBP1-203ENST00000564272 NOMO2Q5JPE7 1267 aa22.17■■□□□ 1.14
SHCBP1-203ENST00000564272 PLPP4Q5VZY2 271 aa22.17■■□□□ 1.14
SHCBP1-203ENST00000564272 AGMOQ6ZNB7 445 aa22.17■■□□□ 1.14
SHCBP1-203ENST00000564272 SLC39A11Q8N1S5 342 aa22.17■■□□□ 1.14
SHCBP1-203ENST00000564272 MCPH1Q8NEM0 835 aa22.17■■□□□ 1.14
SHCBP1-203ENST00000564272 PGBD4Q96DM1 585 aa22.17■■□□□ 1.14
SHCBP1-203ENST00000564272 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.17■■□□□ 1.14
SHCBP1-203ENST00000564272 TBC1D13Q9NVG8 400 aa22.17■■□□□ 1.14
SHCBP1-203ENST00000564272 SPG21Q9NZD8 308 aa22.17■■□□□ 1.14
SHCBP1-203ENST00000564272 LZTS1Q9Y250 596 aa22.17■■□□□ 1.14
SHCBP1-203ENST00000564272 BDP1A6H8Y1 2624 aa22.17■■□□□ 1.14
SHCBP1-203ENST00000564272 ARHGEF35A5YM69 484 aa22.16■■□□□ 1.14
SHCBP1-203ENST00000564272 NT5C1B-RDH14C9J2C7 533 aa22.16■■□□□ 1.14
SHCBP1-203ENST00000564272 ZC3H11AO75152 810 aaKnown RBP eCLIP22.16■■□□□ 1.14
SHCBP1-203ENST00000564272 BCAR1P56945 870 aa22.16■■□□□ 1.14
SHCBP1-203ENST00000564272 ADAM15Q13444 863 aa22.16■■□□□ 1.14
SHCBP1-203ENST00000564272 IL17AQ16552 155 aa22.16■■□□□ 1.14
SHCBP1-203ENST00000564272 PADI6Q6TGC4 694 aa22.16■■□□□ 1.14
SHCBP1-203ENST00000564272 MRPL10Q7Z7H8 261 aaKnown RBP22.16■■□□□ 1.14
SHCBP1-203ENST00000564272 EFHBQ8N7U6 833 aa22.16■■□□□ 1.14
SHCBP1-203ENST00000564272 SNX29Q8TEQ0 813 aa22.16■■□□□ 1.14
SHCBP1-203ENST00000564272 EIF2AQ9BY44 585 aaKnown RBP22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms