RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 LPPQ93052 612 aa20.98■□□□□ 0.95
NME3-204ENST00000563498 GJA10Q969M2 543 aa20.98■□□□□ 0.95
NME3-204ENST00000563498 JPH2Q9BR39 696 aaPredicted RBP20.98■□□□□ 0.95
NME3-204ENST00000563498 NRDE2Q9H7Z3 1164 aa20.98■□□□□ 0.95
NME3-204ENST00000563498 SUCLA2Q9P2R7 463 aaPredicted RBP20.98■□□□□ 0.95
NME3-204ENST00000563498 PCDHA4Q9UN74 947 aa20.98■□□□□ 0.95
NME3-204ENST00000563498 PIN4Q9Y237 131 aaKnown RBP20.98■□□□□ 0.95
NME3-204ENST00000563498 H0Y858 1186 aa20.97■□□□□ 0.95
NME3-204ENST00000563498 OFD1O75665 1012 aa20.97■□□□□ 0.95
NME3-204ENST00000563498 WEE2P0C1S8 567 aa20.97■□□□□ 0.95
NME3-204ENST00000563498 EPCAMP16422 314 aa20.97■□□□□ 0.95
NME3-204ENST00000563498 PDIA3P30101 505 aaKnown RBP20.97■□□□□ 0.95
NME3-204ENST00000563498 MOXD1Q6UVY6 613 aa20.97■□□□□ 0.95
NME3-204ENST00000563498 RHPN2Q8IUC4 686 aa20.97■□□□□ 0.95
NME3-204ENST00000563498 C12orf76Q8N812 135 aaPredicted RBP20.97■□□□□ 0.95
NME3-204ENST00000563498 AUTS2Q8WXX7 1259 aa20.97■□□□□ 0.95
NME3-204ENST00000563498 SNX27Q96L92 541 aa20.97■□□□□ 0.95
NME3-204ENST00000563498 MBOAT7Q96N66 472 aa20.97■□□□□ 0.95
NME3-204ENST00000563498 DBR1Q9UK59 544 aaKnown RBP20.97■□□□□ 0.95
NME3-204ENST00000563498 ZFHX2Q9C0A1 2572 aaPredicted RBP20.96■□□□□ 0.95
NME3-204ENST00000563498 TMEM150BA6NC51 233 aa20.96■□□□□ 0.95
NME3-204ENST00000563498 PSMA5P28066 241 aa20.96■□□□□ 0.95
NME3-204ENST00000563498 RNASELQ05823 741 aaKnown RBP20.96■□□□□ 0.95
NME3-204ENST00000563498 ANO5Q75V66 913 aa20.96■□□□□ 0.95
NME3-204ENST00000563498 CATSPER4Q7RTX7 472 aa20.96■□□□□ 0.95
NME3-204ENST00000563498 CABP7Q86V35 215 aa20.96■□□□□ 0.95
NME3-204ENST00000563498 TRIM22Q8IYM9 498 aa20.96■□□□□ 0.95
NME3-204ENST00000563498 FAM177A1Q8N128 213 aaPredicted RBP20.96■□□□□ 0.95
NME3-204ENST00000563498 TMEM105Q8N8V8 129 aa20.96■□□□□ 0.95
NME3-204ENST00000563498 ETNPPLQ8TBG4 499 aa20.96■□□□□ 0.95
NME3-204ENST00000563498 BCL7CQ8WUZ0 217 aaPredicted RBP20.96■□□□□ 0.95
NME3-204ENST00000563498 PGBD4Q96DM1 585 aa20.96■□□□□ 0.95
NME3-204ENST00000563498 LIMD1Q9UGP4 676 aa20.96■□□□□ 0.95
NME3-204ENST00000563498 MYO10Q9HD67 2058 aa20.95■□□□□ 0.94
NME3-204ENST00000563498 MEIS3P2A8K0S8 358 aa20.95■□□□□ 0.94
NME3-204ENST00000563498 DDX11L8A8MPP1 907 aa20.95■□□□□ 0.94
NME3-204ENST00000563498 M0R2N6 131 aa20.95■□□□□ 0.94
NME3-204ENST00000563498 TDP2O95551 362 aa20.95■□□□□ 0.94
NME3-204ENST00000563498 ASGR2P07307 311 aa20.95■□□□□ 0.94
NME3-204ENST00000563498 PSMC5P62195 406 aa20.95■□□□□ 0.94
NME3-204ENST00000563498 PTPN14Q15678 1187 aa20.95■□□□□ 0.94
NME3-204ENST00000563498 ASTLQ6HA08 431 aaPredicted RBP20.95■□□□□ 0.94
NME3-204ENST00000563498 SH2D3AQ9BRG2 576 aa20.95■□□□□ 0.94
NME3-204ENST00000563498 SFXN1Q9H9B4 322 aa20.95■□□□□ 0.94
NME3-204ENST00000563498 NCOA5Q9HCD5 579 aaKnown RBP20.95■□□□□ 0.94
NME3-204ENST00000563498 CYP26B1Q9NR63 512 aa20.95■□□□□ 0.94
NME3-204ENST00000563498 AGPAT5Q9NUQ2 364 aa20.95■□□□□ 0.94
NME3-204ENST00000563498 INPP5FQ9Y2H2 1132 aa20.95■□□□□ 0.94
NME3-204ENST00000563498 PLXNA3P51805 1871 aa20.94■□□□□ 0.94
NME3-204ENST00000563498 DENND4AQ7Z401 1863 aa20.94■□□□□ 0.94
NME3-204ENST00000563498 SLC11A1P49279 550 aa20.94■□□□□ 0.94
NME3-204ENST00000563498 CLCN5P51795 746 aa20.94■□□□□ 0.94
NME3-204ENST00000563498 CCT2P78371 535 aaKnown RBP20.94■□□□□ 0.94
NME3-204ENST00000563498 LONRF3Q496Y0 759 aa20.94■□□□□ 0.94
NME3-204ENST00000563498 GALNT17Q6IS24 598 aa20.94■□□□□ 0.94
NME3-204ENST00000563498 KANK3Q6NY19 840 aa20.94■□□□□ 0.94
NME3-204ENST00000563498 GPR149Q86SP6 731 aa20.94■□□□□ 0.94
NME3-204ENST00000563498 BLIDQ8IZY5 108 aa20.94■□□□□ 0.94
NME3-204ENST00000563498 DAGLBQ8NCG7 672 aa20.94■□□□□ 0.94
NME3-204ENST00000563498 URGCPQ8TCY9 931 aa20.94■□□□□ 0.94
NME3-204ENST00000563498 NLRP4Q96MN2 994 aa20.94■□□□□ 0.94
NME3-204ENST00000563498 VN1R3Q9BXE9 311 aa20.94■□□□□ 0.94
NME3-204ENST00000563498 SMOC2Q9H3U7 446 aa20.94■□□□□ 0.94
NME3-204ENST00000563498 IFT122Q9HBG6 1241 aa20.94■□□□□ 0.94
NME3-204ENST00000563498 DNAJB4Q9UDY4 337 aa20.94■□□□□ 0.94
NME3-204ENST00000563498 PPME1Q9Y570 386 aa20.94■□□□□ 0.94
NME3-204ENST00000563498 PCDHB2Q9Y5E7 798 aa20.94■□□□□ 0.94
NME3-204ENST00000563498 DEXIO95424 95 aa20.93■□□□□ 0.94
NME3-204ENST00000563498 NBL1P41271 181 aa20.93■□□□□ 0.94
NME3-204ENST00000563498 SSRP1Q08945 709 aaKnown RBP20.93■□□□□ 0.94
NME3-204ENST00000563498 TMC5Q6UXY8 1006 aa20.93■□□□□ 0.94
NME3-204ENST00000563498 OTOP3Q7RTS5 596 aa20.93■□□□□ 0.94
NME3-204ENST00000563498 MRPL10Q7Z7H8 261 aaKnown RBP20.93■□□□□ 0.94
NME3-204ENST00000563498 KSR1Q8IVT5 923 aa20.93■□□□□ 0.94
NME3-204ENST00000563498 EXOC8Q8IYI6 725 aa20.93■□□□□ 0.94
NME3-204ENST00000563498 ACSF2Q96CM8 615 aaPredicted RBP20.93■□□□□ 0.94
NME3-204ENST00000563498 EMILIN2Q9BXX0 1053 aa20.93■□□□□ 0.94
NME3-204ENST00000563498 KANSL3Q9P2N6 904 aa20.93■□□□□ 0.94
NME3-204ENST00000563498 DKC1O60832 514 aaKnown RBP eCLIP20.92■□□□□ 0.94
NME3-204ENST00000563498 AGMOQ6ZNB7 445 aa20.92■□□□□ 0.94
NME3-204ENST00000563498 CCDC149Q6ZUS6 474 aa20.92■□□□□ 0.94
NME3-204ENST00000563498 ZNF280BQ86YH2 543 aa20.92■□□□□ 0.94
NME3-204ENST00000563498 SLC7A3Q8WY07 619 aa20.92■□□□□ 0.94
NME3-204ENST00000563498 KLHL5Q96PQ7 755 aa20.92■□□□□ 0.94
NME3-204ENST00000563498 TMEM175Q9BSA9 504 aa20.92■□□□□ 0.94
NME3-204ENST00000563498 GBP3Q9H0R5 595 aa20.92■□□□□ 0.94
NME3-204ENST00000563498 MFSD1Q9H3U5 465 aa20.92■□□□□ 0.94
NME3-204ENST00000563498 DDX25Q9UHL0 483 aaKnown RBP20.92■□□□□ 0.94
NME3-204ENST00000563498 COL4A3BPQ9Y5P4 624 aa20.92■□□□□ 0.94
NME3-204ENST00000563498 CNTNAP2Q9UHC6 1331 aa20.92■□□□□ 0.94
NME3-204ENST00000563498 B4GALT3O60512 393 aa20.91■□□□□ 0.94
NME3-204ENST00000563498 LILRB3O75022 631 aa20.91■□□□□ 0.94
NME3-204ENST00000563498 QARSP47897 775 aaKnown RBP20.91■□□□□ 0.94
NME3-204ENST00000563498 CLCN4P51793 760 aa20.91■□□□□ 0.94
NME3-204ENST00000563498 PPP2R5CQ13362 524 aa20.91■□□□□ 0.94
NME3-204ENST00000563498 NONOQ15233 471 aaKnown RBP eCLIP20.91■□□□□ 0.94
NME3-204ENST00000563498 NPY5RQ15761 445 aa20.91■□□□□ 0.94
NME3-204ENST00000563498 PLA2G4FQ68DD2 849 aa20.91■□□□□ 0.94
NME3-204ENST00000563498 C15orf39Q6ZRI6 1047 aa20.91■□□□□ 0.94
NME3-204ENST00000563498 SRGAP1Q7Z6B7 1085 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms