RNA–Protein interactions for RNA: ENST00000563273.5

NSMCE1-204, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-204ENST00000563273 EVPLQ92817 2033 aa13.6□□□□□ -0.23
NSMCE1-204ENST00000563273 CCDC43Q96MW1 224 aaKnown RBP13.6□□□□□ -0.23
NSMCE1-204ENST00000563273 RAB34Q9BZG1 259 aa13.6□□□□□ -0.23
NSMCE1-204ENST00000563273 ALG13Q9NP73 1137 aaKnown RBP13.6□□□□□ -0.23
NSMCE1-204ENST00000563273 FAM105AQ9NUU6 356 aa13.6□□□□□ -0.23
NSMCE1-204ENST00000563273 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.6□□□□□ -0.23
NSMCE1-204ENST00000563273 WDR81Q562E7 1941 aa13.6□□□□□ -0.23
NSMCE1-204ENST00000563273 MED24O75448 989 aa13.59□□□□□ -0.23
NSMCE1-204ENST00000563273 FGF18O76093 207 aa13.59□□□□□ -0.23
NSMCE1-204ENST00000563273 SRGAP2CP0DJJ0 459 aa13.59□□□□□ -0.23
NSMCE1-204ENST00000563273 DNAJB1P25685 340 aa13.59□□□□□ -0.23
NSMCE1-204ENST00000563273 HOXA11P31270 313 aaPredicted RBP13.59□□□□□ -0.23
NSMCE1-204ENST00000563273 HYAL1Q12794 435 aa13.59□□□□□ -0.23
NSMCE1-204ENST00000563273 RILPL1Q5EBL4 403 aa13.59□□□□□ -0.23
NSMCE1-204ENST00000563273 SPOUT1Q5T280 376 aaKnown RBP13.59□□□□□ -0.23
NSMCE1-204ENST00000563273 LRRC55Q6ZSA7 311 aa13.59□□□□□ -0.23
NSMCE1-204ENST00000563273 MRPL10Q7Z7H8 261 aaKnown RBP13.59□□□□□ -0.23
NSMCE1-204ENST00000563273 IGSF22Q8N9C0 903 aa13.59□□□□□ -0.23
NSMCE1-204ENST00000563273 CNNM3Q8NE01 707 aa13.59□□□□□ -0.23
NSMCE1-204ENST00000563273 PIGOQ8TEQ8 1089 aa13.59□□□□□ -0.23
NSMCE1-204ENST00000563273 PGBD4Q96DM1 585 aa13.59□□□□□ -0.23
NSMCE1-204ENST00000563273 ZNF558Q96NG5 402 aa13.59□□□□□ -0.23
NSMCE1-204ENST00000563273 MINDY3Q9H8M7 445 aa13.59□□□□□ -0.23
NSMCE1-204ENST00000563273 CNTNAP2Q9UHC6 1331 aa13.59□□□□□ -0.23
NSMCE1-204ENST00000563273 KCNA5P22460 613 aa13.58□□□□□ -0.24
NSMCE1-204ENST00000563273 GJB2P29033 226 aa13.58□□□□□ -0.24
NSMCE1-204ENST00000563273 NCBP1Q09161 790 aaKnown RBP13.58□□□□□ -0.24
NSMCE1-204ENST00000563273 PTGDRQ13258 359 aa13.58□□□□□ -0.24
NSMCE1-204ENST00000563273 CAPSQ13938 189 aa13.58□□□□□ -0.24
NSMCE1-204ENST00000563273 KCNT2Q6UVM3 1135 aa13.58□□□□□ -0.24
NSMCE1-204ENST00000563273 GLB1LQ6UWU2 654 aa13.58□□□□□ -0.24
NSMCE1-204ENST00000563273 KCTD17Q8N5Z5 321 aa13.58□□□□□ -0.24
NSMCE1-204ENST00000563273 MRPS27Q92552 414 aaKnown RBP13.58□□□□□ -0.24
NSMCE1-204ENST00000563273 CDCA3Q99618 268 aaPredicted RBP13.58□□□□□ -0.24
NSMCE1-204ENST00000563273 TLR9Q9NR96 1032 aa13.58□□□□□ -0.24
NSMCE1-204ENST00000563273 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.58□□□□□ -0.24
NSMCE1-204ENST00000563273 PUF60Q9UHX1 559 aaKnown RBP13.58□□□□□ -0.24
NSMCE1-204ENST00000563273 FAM50BQ9Y247 325 aa13.58□□□□□ -0.24
NSMCE1-204ENST00000563273 PCDHB2Q9Y5E7 798 aa13.58□□□□□ -0.24
NSMCE1-204ENST00000563273 FSCN2O14926 492 aa13.57□□□□□ -0.24
NSMCE1-204ENST00000563273 INPPL1O15357 1258 aa13.57□□□□□ -0.24
NSMCE1-204ENST00000563273 USO1O60763 962 aaKnown RBP13.57□□□□□ -0.24
NSMCE1-204ENST00000563273 ERLIN2O94905 339 aa13.57□□□□□ -0.24
NSMCE1-204ENST00000563273 CYP11B2P19099 503 aa13.57□□□□□ -0.24
NSMCE1-204ENST00000563273 IBSPP21815 317 aaPredicted RBP13.57□□□□□ -0.24
NSMCE1-204ENST00000563273 GLRA2P23416 452 aa13.57□□□□□ -0.24
NSMCE1-204ENST00000563273 CUL4AQ13619 759 aa13.57□□□□□ -0.24
NSMCE1-204ENST00000563273 AMHR2Q16671 573 aa13.57□□□□□ -0.24
NSMCE1-204ENST00000563273 NOMO2Q5JPE7 1267 aa13.57□□□□□ -0.24
NSMCE1-204ENST00000563273 NOTUMQ6P988 496 aa13.57□□□□□ -0.24
NSMCE1-204ENST00000563273 THNSL1Q8IYQ7 743 aa13.57□□□□□ -0.24
NSMCE1-204ENST00000563273 EFHBQ8N7U6 833 aa13.57□□□□□ -0.24
NSMCE1-204ENST00000563273 RNF169Q8NCN4 708 aa13.57□□□□□ -0.24
NSMCE1-204ENST00000563273 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.57□□□□□ -0.24
NSMCE1-204ENST00000563273 HELQQ8TDG4 1101 aa13.57□□□□□ -0.24
NSMCE1-204ENST00000563273 ASAP3Q8TDY4 903 aa13.57□□□□□ -0.24
NSMCE1-204ENST00000563273 POLR3FQ9H1D9 316 aaPredicted RBP13.57□□□□□ -0.24
NSMCE1-204ENST00000563273 UBN1Q9NPG3 1134 aa13.57□□□□□ -0.24
NSMCE1-204ENST00000563273 BMP2KQ9NSY1 1161 aaPredicted RBP13.57□□□□□ -0.24
NSMCE1-204ENST00000563273 SPG21Q9NZD8 308 aa13.57□□□□□ -0.24
NSMCE1-204ENST00000563273 HCSTQ9UBK5 93 aa13.57□□□□□ -0.24
NSMCE1-204ENST00000563273 LRWD1Q9UFC0 647 aa13.57□□□□□ -0.24
NSMCE1-204ENST00000563273 SMC3Q9UQE7 1217 aa13.57□□□□□ -0.24
NSMCE1-204ENST00000563273 PCDHB6Q9Y5E3 794 aa13.57□□□□□ -0.24
NSMCE1-204ENST00000563273 ZMYM2Q9UBW7 1377 aa13.57□□□□□ -0.24
NSMCE1-204ENST00000563273 ARHGEF35A5YM69 484 aa13.56□□□□□ -0.24
NSMCE1-204ENST00000563273 GRXCR2A6NFK2 248 aa13.56□□□□□ -0.24
NSMCE1-204ENST00000563273 H3BQV1 296 aa13.56□□□□□ -0.24
NSMCE1-204ENST00000563273 TSPAN1O60635 241 aa13.56□□□□□ -0.24
NSMCE1-204ENST00000563273 OFD1O75665 1012 aa13.56□□□□□ -0.24
NSMCE1-204ENST00000563273 NCLP19338 710 aaKnown RBP13.56□□□□□ -0.24
NSMCE1-204ENST00000563273 IRS1P35568 1242 aa13.56□□□□□ -0.24
NSMCE1-204ENST00000563273 LTBRP36941 435 aa13.56□□□□□ -0.24
NSMCE1-204ENST00000563273 ALDH7A1P49419 539 aaKnown RBP13.56□□□□□ -0.24
NSMCE1-204ENST00000563273 KRT17Q04695 432 aa13.56□□□□□ -0.24
NSMCE1-204ENST00000563273 MBTD1Q05BQ5 628 aa13.56□□□□□ -0.24
NSMCE1-204ENST00000563273 ADAM15Q13444 863 aa13.56□□□□□ -0.24
NSMCE1-204ENST00000563273 NBR1Q14596 966 aa13.56□□□□□ -0.24
NSMCE1-204ENST00000563273 FAM187BQ17R55 369 aa13.56□□□□□ -0.24
NSMCE1-204ENST00000563273 UBXN11Q5T124 520 aa13.56□□□□□ -0.24
NSMCE1-204ENST00000563273 CDCA2Q69YH5 1023 aaPredicted RBP13.56□□□□□ -0.24
NSMCE1-204ENST00000563273 POTEGQ6S5H5 508 aa13.56□□□□□ -0.24
NSMCE1-204ENST00000563273 PPP4R3CPQ6ZMV5 832 aa13.56□□□□□ -0.24
NSMCE1-204ENST00000563273 AGMOQ6ZNB7 445 aa13.56□□□□□ -0.24
NSMCE1-204ENST00000563273 SLC39A11Q8N1S5 342 aa13.56□□□□□ -0.24
NSMCE1-204ENST00000563273 PRIMPOLQ96LW4 560 aa13.56□□□□□ -0.24
NSMCE1-204ENST00000563273 BACH2Q9BYV9 841 aa13.56□□□□□ -0.24
NSMCE1-204ENST00000563273 NGRNQ9NPE2 291 aaKnown RBP13.56□□□□□ -0.24
NSMCE1-204ENST00000563273 CLDND1Q9NY35 253 aa13.56□□□□□ -0.24
NSMCE1-204ENST00000563273 KANSL3Q9P2N6 904 aa13.56□□□□□ -0.24
NSMCE1-204ENST00000563273 STK39Q9UEW8 545 aa13.56□□□□□ -0.24
NSMCE1-204ENST00000563273 NLRC5Q86WI3 1866 aa13.56□□□□□ -0.24
NSMCE1-204ENST00000563273 LOXHD1Q8IVV2 1947 aa13.56□□□□□ -0.24
NSMCE1-204ENST00000563273 INO80B-WBP1J3KQ70 363 aa13.55□□□□□ -0.24
NSMCE1-204ENST00000563273 CCT6AP40227 531 aaKnown RBP13.55□□□□□ -0.24
NSMCE1-204ENST00000563273 ATP2C1P98194 919 aaPredicted RBP13.55□□□□□ -0.24
NSMCE1-204ENST00000563273 ARL6IP4Q66PJ3 421 aaKnown RBP13.55□□□□□ -0.24
NSMCE1-204ENST00000563273 MCTP1Q6DN14 999 aa13.55□□□□□ -0.24
NSMCE1-204ENST00000563273 PTCRAQ6ISU1 281 aaPredicted RBP13.55□□□□□ -0.24
NSMCE1-204ENST00000563273 PADI6Q6TGC4 694 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms