RNA–Protein interactions for RNA: ENST00000563047.1

GGA2-204, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

TSL 5

Gene GGA2, Length 366 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-204ENST00000563047 VAV3Q9UKW4 847 aa23.75■■□□□ 1.39
GGA2-204ENST00000563047 ZNF623O75123 536 aa23.74■■□□□ 1.39
GGA2-204ENST00000563047 OFD1O75665 1012 aa23.74■■□□□ 1.39
GGA2-204ENST00000563047 SKIP12755 728 aa23.74■■□□□ 1.39
GGA2-204ENST00000563047 NPEPPSP55786 919 aa23.74■■□□□ 1.39
GGA2-204ENST00000563047 ITIH3Q06033 890 aa23.74■■□□□ 1.39
GGA2-204ENST00000563047 PPP2R5CQ13362 524 aa23.74■■□□□ 1.39
GGA2-204ENST00000563047 NOMO2Q5JPE7 1267 aa23.74■■□□□ 1.39
GGA2-204ENST00000563047 CATSPER4Q7RTX7 472 aa23.74■■□□□ 1.39
GGA2-204ENST00000563047 ZNF579Q8NAF0 562 aaKnown RBP23.74■■□□□ 1.39
GGA2-204ENST00000563047 BCL7CQ8WUZ0 217 aaPredicted RBP23.74■■□□□ 1.39
GGA2-204ENST00000563047 IGSF21Q96ID5 467 aa23.74■■□□□ 1.39
GGA2-204ENST00000563047 PHF20Q9BVI0 1012 aa23.74■■□□□ 1.39
GGA2-204ENST00000563047 KCNMB3Q9NPA1 279 aa23.74■■□□□ 1.39
GGA2-204ENST00000563047 TSHZ2Q9NRE2 1034 aa23.74■■□□□ 1.39
GGA2-204ENST00000563047 WRAP73Q9P2S5 460 aaPredicted RBP23.74■■□□□ 1.39
GGA2-204ENST00000563047 NR2E1Q9Y466 385 aa23.74■■□□□ 1.39
GGA2-204ENST00000563047 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP23.73■■□□□ 1.39
GGA2-204ENST00000563047 GALTP07902 379 aa23.73■■□□□ 1.39
GGA2-204ENST00000563047 QARSP47897 775 aaKnown RBP23.73■■□□□ 1.39
GGA2-204ENST00000563047 TCF15Q12870 199 aa23.73■■□□□ 1.39
GGA2-204ENST00000563047 CES5AQ6NT32 575 aa23.73■■□□□ 1.39
GGA2-204ENST00000563047 CPLX2Q6PUV4 134 aaKnown RBP23.73■■□□□ 1.39
GGA2-204ENST00000563047 GLB1LQ6UWU2 654 aa23.73■■□□□ 1.39
GGA2-204ENST00000563047 DDX53Q86TM3 631 aaKnown RBP23.73■■□□□ 1.39
GGA2-204ENST00000563047 JPH2Q9BR39 696 aaPredicted RBP23.73■■□□□ 1.39
GGA2-204ENST00000563047 INPP5FQ9Y2H2 1132 aa23.73■■□□□ 1.39
GGA2-204ENST00000563047 IRAK3Q9Y616 596 aa23.73■■□□□ 1.39
GGA2-204ENST00000563047 C2CD4DB7Z1M9 353 aa23.72■■□□□ 1.39
GGA2-204ENST00000563047 B4GALT3O60512 393 aa23.72■■□□□ 1.39
GGA2-204ENST00000563047 WEE2P0C1S8 567 aa23.72■■□□□ 1.39
GGA2-204ENST00000563047 CTSAP10619 480 aa23.72■■□□□ 1.39
GGA2-204ENST00000563047 RAB27AP51159 221 aa23.72■■□□□ 1.39
GGA2-204ENST00000563047 PTPN5P54829 565 aa23.72■■□□□ 1.39
GGA2-204ENST00000563047 VCPP55072 806 aaKnown RBP23.72■■□□□ 1.39
GGA2-204ENST00000563047 BMS1Q14692 1282 aaKnown RBP23.72■■□□□ 1.39
GGA2-204ENST00000563047 ZBTB33Q86T24 672 aa23.72■■□□□ 1.39
GGA2-204ENST00000563047 C12orf76Q8N812 135 aaPredicted RBP23.72■■□□□ 1.39
GGA2-204ENST00000563047 FAM20AQ96MK3 541 aa23.72■■□□□ 1.39
GGA2-204ENST00000563047 NECTIN4Q96NY8 510 aa23.72■■□□□ 1.39
GGA2-204ENST00000563047 PRRX2Q99811 253 aa23.72■■□□□ 1.39
GGA2-204ENST00000563047 PDRG1Q9NUG6 133 aa23.72■■□□□ 1.39
GGA2-204ENST00000563047 AGPAT5Q9NUQ2 364 aa23.72■■□□□ 1.39
GGA2-204ENST00000563047 DNAJB4Q9UDY4 337 aa23.72■■□□□ 1.39
GGA2-204ENST00000563047 COL4A3BPQ9Y5P4 624 aa23.72■■□□□ 1.39
GGA2-204ENST00000563047 POLGP54098 1239 aaPredicted RBP23.71■■□□□ 1.39
GGA2-204ENST00000563047 SCRN1Q12765 414 aa23.71■■□□□ 1.39
GGA2-204ENST00000563047 RARS2Q5T160 578 aaKnown RBP23.71■■□□□ 1.39
GGA2-204ENST00000563047 PPP4R3AQ6IN85 833 aa23.71■■□□□ 1.39
GGA2-204ENST00000563047 KANK3Q6NY19 840 aa23.71■■□□□ 1.39
GGA2-204ENST00000563047 AGMOQ6ZNB7 445 aa23.71■■□□□ 1.39
GGA2-204ENST00000563047 NEK8Q86SG6 692 aa23.71■■□□□ 1.39
GGA2-204ENST00000563047 ZNF280BQ86YH2 543 aa23.71■■□□□ 1.39
GGA2-204ENST00000563047 KREMEN2Q8NCW0 462 aa23.71■■□□□ 1.39
GGA2-204ENST00000563047 HAS1Q92839 578 aa23.71■■□□□ 1.39
GGA2-204ENST00000563047 CEP170P1Q96L14 293 aa23.71■■□□□ 1.39
GGA2-204ENST00000563047 VN1R3Q9BXE9 311 aa23.71■■□□□ 1.39
GGA2-204ENST00000563047 DHX33Q9H6R0 707 aaKnown RBP23.71■■□□□ 1.39
GGA2-204ENST00000563047 MINDY3Q9H8M7 445 aa23.71■■□□□ 1.39
GGA2-204ENST00000563047 PCDHB2Q9Y5E7 798 aa23.71■■□□□ 1.39
GGA2-204ENST00000563047 CCDC194A0A1B0GVG4 234 aa23.7■■□□□ 1.38
GGA2-204ENST00000563047 CARNS1A5YM72 827 aa23.7■■□□□ 1.38
GGA2-204ENST00000563047 DTNBO60941 627 aa23.7■■□□□ 1.38
GGA2-204ENST00000563047 P4HBP07237 508 aaKnown RBP23.7■■□□□ 1.38
GGA2-204ENST00000563047 EPCAMP16422 314 aa23.7■■□□□ 1.38
GGA2-204ENST00000563047 MTHFRP42898 656 aa23.7■■□□□ 1.38
GGA2-204ENST00000563047 SLC11A1P49279 550 aa23.7■■□□□ 1.38
GGA2-204ENST00000563047 RNASELQ05823 741 aaKnown RBP23.7■■□□□ 1.38
GGA2-204ENST00000563047 SLC22A17Q8WUG5 538 aa23.7■■□□□ 1.38
GGA2-204ENST00000563047 SLC7A3Q8WY07 619 aa23.7■■□□□ 1.38
GGA2-204ENST00000563047 TMEM143Q96AN5 459 aa23.7■■□□□ 1.38
GGA2-204ENST00000563047 GBP3Q9H0R5 595 aa23.7■■□□□ 1.38
GGA2-204ENST00000563047 SLKQ9H2G2 1235 aaPredicted RBP23.7■■□□□ 1.38
GGA2-204ENST00000563047 GJB4Q9NTQ9 266 aa23.7■■□□□ 1.38
GGA2-204ENST00000563047 MYO10Q9HD67 2058 aa23.7■■□□□ 1.38
GGA2-204ENST00000563047 DKC1O60832 514 aaKnown RBP eCLIP23.69■■□□□ 1.38
GGA2-204ENST00000563047 PDGFBP01127 241 aaPredicted RBP23.69■■□□□ 1.38
GGA2-204ENST00000563047 GCFC2P16383 781 aaKnown RBP23.69■■□□□ 1.38
GGA2-204ENST00000563047 AVPR2P30518 371 aa23.69■■□□□ 1.38
GGA2-204ENST00000563047 AFF1P51825 1210 aaKnown RBP23.69■■□□□ 1.38
GGA2-204ENST00000563047 GIT2Q14161 759 aa23.69■■□□□ 1.38
GGA2-204ENST00000563047 MRPL10Q7Z7H8 261 aaKnown RBP23.69■■□□□ 1.38
GGA2-204ENST00000563047 FEZF2Q8TBJ5 459 aa23.69■■□□□ 1.38
GGA2-204ENST00000563047 OXER1Q8TDS5 423 aa23.69■■□□□ 1.38
GGA2-204ENST00000563047 PRPF31Q8WWY3 499 aaKnown RBP23.69■■□□□ 1.38
GGA2-204ENST00000563047 PGBD4Q96DM1 585 aa23.69■■□□□ 1.38
GGA2-204ENST00000563047 RIPOR3Q96MK2 946 aa23.69■■□□□ 1.38
GGA2-204ENST00000563047 DZANK1Q9NVP4 752 aa23.69■■□□□ 1.38
GGA2-204ENST00000563047 CCNT1O60563 726 aaKnown RBP23.68■■□□□ 1.38
GGA2-204ENST00000563047 DDHD2O94830 711 aa23.68■■□□□ 1.38
GGA2-204ENST00000563047 SRGAP2CP0DJJ0 459 aa23.68■■□□□ 1.38
GGA2-204ENST00000563047 HOXA11P31270 313 aaPredicted RBP23.68■■□□□ 1.38
GGA2-204ENST00000563047 LAMTOR4Q0VGL1 99 aa23.68■■□□□ 1.38
GGA2-204ENST00000563047 UBXN11Q5T124 520 aa23.68■■□□□ 1.38
GGA2-204ENST00000563047 KIAA1841Q6NSI8 718 aa23.68■■□□□ 1.38
GGA2-204ENST00000563047 PIK3AP1Q6ZUJ8 805 aa23.68■■□□□ 1.38
GGA2-204ENST00000563047 SRGAP1Q7Z6B7 1085 aa23.68■■□□□ 1.38
GGA2-204ENST00000563047 C4orf19Q8IY42 314 aa23.68■■□□□ 1.38
GGA2-204ENST00000563047 TMEM87AQ8NBN3 555 aa23.68■■□□□ 1.38
GGA2-204ENST00000563047 PSPC1Q8WXF1 523 aaKnown RBP23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms