RNA–Protein interactions for RNA: ENST00000562872.1

KLHDC4-209, Transcript of kelch domain containing 4, humanhuman

TSL 4

Gene KLHDC4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-209ENST00000562872 SRGAP2CP0DJJ0 459 aa12.35□□□□□ -0.43
KLHDC4-209ENST00000562872 HOXA11P31270 313 aaPredicted RBP12.35□□□□□ -0.43
KLHDC4-209ENST00000562872 TXKP42681 527 aa12.35□□□□□ -0.43
KLHDC4-209ENST00000562872 LAMTOR4Q0VGL1 99 aa12.35□□□□□ -0.43
KLHDC4-209ENST00000562872 COASYQ13057 564 aa12.35□□□□□ -0.43
KLHDC4-209ENST00000562872 CALCRLQ16602 461 aa12.35□□□□□ -0.43
KLHDC4-209ENST00000562872 C8orf34Q49A92 452 aa12.35□□□□□ -0.43
KLHDC4-209ENST00000562872 XKR9Q5GH70 373 aa12.35□□□□□ -0.43
KLHDC4-209ENST00000562872 UBXN11Q5T124 520 aa12.35□□□□□ -0.43
KLHDC4-209ENST00000562872 AGMOQ6ZNB7 445 aa12.35□□□□□ -0.43
KLHDC4-209ENST00000562872 TPH2Q8IWU9 490 aa12.35□□□□□ -0.43
KLHDC4-209ENST00000562872 FEZF2Q8TBJ5 459 aa12.35□□□□□ -0.43
KLHDC4-209ENST00000562872 ASAP3Q8TDY4 903 aa12.35□□□□□ -0.43
KLHDC4-209ENST00000562872 AUTS2Q8WXX7 1259 aa12.35□□□□□ -0.43
KLHDC4-209ENST00000562872 SLC7A3Q8WY07 619 aa12.35□□□□□ -0.43
KLHDC4-209ENST00000562872 MTMR9Q96QG7 549 aa12.35□□□□□ -0.43
KLHDC4-209ENST00000562872 NAP1L4Q99733 375 aaKnown RBP12.35□□□□□ -0.43
KLHDC4-209ENST00000562872 HSD17B14Q9BPX1 270 aa12.35□□□□□ -0.43
KLHDC4-209ENST00000562872 TRAIPQ9BWF2 469 aa12.35□□□□□ -0.43
KLHDC4-209ENST00000562872 APOL5Q9BWW9 433 aa12.35□□□□□ -0.43
KLHDC4-209ENST00000562872 ENTPD7Q9NQZ7 604 aa12.35□□□□□ -0.43
KLHDC4-209ENST00000562872 AGPAT5Q9NUQ2 364 aa12.35□□□□□ -0.43
KLHDC4-209ENST00000562872 DACT1Q9NYF0 836 aa12.35□□□□□ -0.43
KLHDC4-209ENST00000562872 PRKAG3Q9UGI9 489 aa12.35□□□□□ -0.43
KLHDC4-209ENST00000562872 LZTS1Q9Y250 596 aa12.35□□□□□ -0.43
KLHDC4-209ENST00000562872 INPP5FQ9Y2H2 1132 aa12.35□□□□□ -0.43
KLHDC4-209ENST00000562872 USP15Q9Y4E8 981 aaPredicted RBP12.35□□□□□ -0.43
KLHDC4-209ENST00000562872 NEMFO60524 1076 aa12.34□□□□□ -0.43
KLHDC4-209ENST00000562872 GPR37L1O60883 481 aa12.34□□□□□ -0.43
KLHDC4-209ENST00000562872 ZC3H11AO75152 810 aaKnown RBP eCLIP12.34□□□□□ -0.43
KLHDC4-209ENST00000562872 ATP2B1P20020 1258 aa12.34□□□□□ -0.43
KLHDC4-209ENST00000562872 RFC5P40937 340 aa12.34□□□□□ -0.43
KLHDC4-209ENST00000562872 BCAR1P56945 870 aa12.34□□□□□ -0.43
KLHDC4-209ENST00000562872 CSPP1Q1MSJ5 1256 aa12.34□□□□□ -0.43
KLHDC4-209ENST00000562872 LLGL2Q6P1M3 1020 aa12.34□□□□□ -0.43
KLHDC4-209ENST00000562872 FERMT3Q86UX7 667 aa12.34□□□□□ -0.43
KLHDC4-209ENST00000562872 SLFN12Q8IYM2 578 aa12.34□□□□□ -0.43
KLHDC4-209ENST00000562872 RNF149Q8NC42 400 aa12.34□□□□□ -0.43
KLHDC4-209ENST00000562872 PSPC1Q8WXF1 523 aaKnown RBP12.34□□□□□ -0.43
KLHDC4-209ENST00000562872 PPP2R3CQ969Q6 453 aa12.34□□□□□ -0.43
KLHDC4-209ENST00000562872 VN1R3Q9BXE9 311 aa12.34□□□□□ -0.43
KLHDC4-209ENST00000562872 ZSWIM4Q9H7M6 989 aa12.34□□□□□ -0.43
KLHDC4-209ENST00000562872 NRDE2Q9H7Z3 1164 aa12.34□□□□□ -0.43
KLHDC4-209ENST00000562872 TTC12Q9H892 705 aaPredicted RBP12.34□□□□□ -0.43
KLHDC4-209ENST00000562872 BRMS1Q9HCU9 246 aa12.34□□□□□ -0.43
KLHDC4-209ENST00000562872 CHST12Q9NRB3 414 aa12.34□□□□□ -0.43
KLHDC4-209ENST00000562872 TBC1D13Q9NVG8 400 aa12.34□□□□□ -0.43
KLHDC4-209ENST00000562872 SPG21Q9NZD8 308 aa12.34□□□□□ -0.43
KLHDC4-209ENST00000562872 DNAJB4Q9UDY4 337 aa12.34□□□□□ -0.43
KLHDC4-209ENST00000562872 MUTYHQ9UIF7 546 aa12.34□□□□□ -0.43
KLHDC4-209ENST00000562872 FAM50BQ9Y247 325 aa12.34□□□□□ -0.43
KLHDC4-209ENST00000562872 PCDHB2Q9Y5E7 798 aa12.34□□□□□ -0.43
KLHDC4-209ENST00000562872 DCXO43602 365 aa12.33□□□□□ -0.44
KLHDC4-209ENST00000562872 OFD1O75665 1012 aa12.33□□□□□ -0.44
KLHDC4-209ENST00000562872 BAG4O95429 457 aaKnown RBP12.33□□□□□ -0.44
KLHDC4-209ENST00000562872 MCM7P33993 719 aa12.33□□□□□ -0.44
KLHDC4-209ENST00000562872 CDC42EP1Q00587 391 aa12.33□□□□□ -0.44
KLHDC4-209ENST00000562872 CAPSQ13938 189 aa12.33□□□□□ -0.44
KLHDC4-209ENST00000562872 NOMO2Q5JPE7 1267 aa12.33□□□□□ -0.44
KLHDC4-209ENST00000562872 SYCE2Q6PIF2 218 aa12.33□□□□□ -0.44
KLHDC4-209ENST00000562872 ZNF280BQ86YH2 543 aa12.33□□□□□ -0.44
KLHDC4-209ENST00000562872 RNF135Q8IUD6 432 aa12.33□□□□□ -0.44
KLHDC4-209ENST00000562872 PIGOQ8TEQ8 1089 aa12.33□□□□□ -0.44
KLHDC4-209ENST00000562872 MTRQ99707 1265 aa12.33□□□□□ -0.44
KLHDC4-209ENST00000562872 JPH2Q9BR39 696 aaPredicted RBP12.33□□□□□ -0.44
KLHDC4-209ENST00000562872 EIF2AQ9BY44 585 aaKnown RBP12.33□□□□□ -0.44
KLHDC4-209ENST00000562872 GBP3Q9H0R5 595 aa12.33□□□□□ -0.44
KLHDC4-209ENST00000562872 PCDHA12Q9UN75 941 aa12.33□□□□□ -0.44
KLHDC4-209ENST00000562872 LIMCH1Q9UPQ0 1083 aa12.33□□□□□ -0.44
KLHDC4-209ENST00000562872 TRIOO75962 3097 aa12.33□□□□□ -0.44
KLHDC4-209ENST00000562872 C2orf71A6NGG8 1288 aa12.32□□□□□ -0.44
KLHDC4-209ENST00000562872 TSPAN1O60635 241 aa12.32□□□□□ -0.44
KLHDC4-209ENST00000562872 DKC1O60832 514 aaKnown RBP eCLIP12.32□□□□□ -0.44
KLHDC4-209ENST00000562872 ZNF623O75123 536 aa12.32□□□□□ -0.44
KLHDC4-209ENST00000562872 MED24O75448 989 aa12.32□□□□□ -0.44
KLHDC4-209ENST00000562872 DDHD2O94830 711 aa12.32□□□□□ -0.44
KLHDC4-209ENST00000562872 LYPLA2O95372 231 aa12.32□□□□□ -0.44
KLHDC4-209ENST00000562872 GALTP07902 379 aa12.32□□□□□ -0.44
KLHDC4-209ENST00000562872 SPATA31C1P0DKV0 1188 aa12.32□□□□□ -0.44
KLHDC4-209ENST00000562872 PPM1AP35813 382 aa12.32□□□□□ -0.44
KLHDC4-209ENST00000562872 SLC11A1P49279 550 aa12.32□□□□□ -0.44
KLHDC4-209ENST00000562872 RARRES1P49788 294 aa12.32□□□□□ -0.44
KLHDC4-209ENST00000562872 TRIM29Q14134 588 aa12.32□□□□□ -0.44
KLHDC4-209ENST00000562872 NBR1Q14596 966 aa12.32□□□□□ -0.44
KLHDC4-209ENST00000562872 AMHR2Q16671 573 aa12.32□□□□□ -0.44
KLHDC4-209ENST00000562872 GLB1LQ6UWU2 654 aa12.32□□□□□ -0.44
KLHDC4-209ENST00000562872 TMC7Q7Z402 723 aa12.32□□□□□ -0.44
KLHDC4-209ENST00000562872 SMG8Q8ND04 991 aaKnown RBP12.32□□□□□ -0.44
KLHDC4-209ENST00000562872 SUSD6Q92537 303 aa12.32□□□□□ -0.44
KLHDC4-209ENST00000562872 CPB2Q96IY4 423 aa12.32□□□□□ -0.44
KLHDC4-209ENST00000562872 MRPL9Q9BYD2 267 aaKnown RBP12.32□□□□□ -0.44
KLHDC4-209ENST00000562872 INO80BQ9C086 356 aaPredicted RBP12.32□□□□□ -0.44
KLHDC4-209ENST00000562872 ZBP1Q9H171 429 aa12.32□□□□□ -0.44
KLHDC4-209ENST00000562872 S1PR5Q9H228 398 aa12.32□□□□□ -0.44
KLHDC4-209ENST00000562872 RNF39Q9H2S5 420 aa12.32□□□□□ -0.44
KLHDC4-209ENST00000562872 GPRC5CQ9NQ84 441 aa12.32□□□□□ -0.44
KLHDC4-209ENST00000562872 HES2Q9Y543 173 aa12.32□□□□□ -0.44
KLHDC4-209ENST00000562872 PPME1Q9Y570 386 aa12.32□□□□□ -0.44
KLHDC4-209ENST00000562872 LOC730098B7Z3J9 87 aa12.31□□□□□ -0.44
KLHDC4-209ENST00000562872 F8W810 466 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms