RNA–Protein interactions for RNA: ENST00000562601.5

CDH13-206, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-206ENST00000562601 ITGB3BPQ13352 177 aaPredicted RBP6.59□□□□□ -1.35
CDH13-206ENST00000562601 AP3B2Q13367 1082 aa6.59□□□□□ -1.35
CDH13-206ENST00000562601 NEDD9Q14511 834 aa6.59□□□□□ -1.35
CDH13-206ENST00000562601 SUZ12Q15022 739 aaKnown RBP6.59□□□□□ -1.35
CDH13-206ENST00000562601 NPY5RQ15761 445 aa6.59□□□□□ -1.35
CDH13-206ENST00000562601 CEP55Q53EZ4 464 aa6.59□□□□□ -1.35
CDH13-206ENST00000562601 HABP4Q5JVS0 413 aaKnown RBP6.59□□□□□ -1.35
CDH13-206ENST00000562601 XRRA1Q6P2D8 792 aa6.59□□□□□ -1.35
CDH13-206ENST00000562601 PLA2G4DQ86XP0 818 aa6.59□□□□□ -1.35
CDH13-206ENST00000562601 FAM126BQ8IXS8 530 aa6.59□□□□□ -1.35
CDH13-206ENST00000562601 BLIDQ8IZY5 108 aa6.59□□□□□ -1.35
CDH13-206ENST00000562601 CCDC148Q8NFR7 591 aa6.59□□□□□ -1.35
CDH13-206ENST00000562601 BICD2Q8TD16 824 aa6.59□□□□□ -1.35
CDH13-206ENST00000562601 GJA10Q969M2 543 aa6.59□□□□□ -1.35
CDH13-206ENST00000562601 GPRASP2Q96D09 838 aa6.59□□□□□ -1.35
CDH13-206ENST00000562601 TOX2Q96NM4 488 aa6.59□□□□□ -1.35
CDH13-206ENST00000562601 GPR20Q99678 358 aa6.59□□□□□ -1.35
CDH13-206ENST00000562601 LBHD1Q9BQE6 289 aaPredicted RBP6.59□□□□□ -1.35
CDH13-206ENST00000562601 BACH2Q9BYV9 841 aa6.59□□□□□ -1.35
CDH13-206ENST00000562601 GLT8D2Q9H1C3 349 aa6.59□□□□□ -1.35
CDH13-206ENST00000562601 UPF2Q9HAU5 1272 aaKnown RBP6.59□□□□□ -1.35
CDH13-206ENST00000562601 PRDM6Q9NQX0 595 aa6.59□□□□□ -1.35
CDH13-206ENST00000562601 SH3GLB2Q9NR46 395 aa6.59□□□□□ -1.35
CDH13-206ENST00000562601 KCNH7Q9NS40 1196 aa6.59□□□□□ -1.35
CDH13-206ENST00000562601 ZFATQ9P243 1243 aa6.59□□□□□ -1.35
CDH13-206ENST00000562601 PCDHA4Q9UN74 947 aa6.59□□□□□ -1.35
CDH13-206ENST00000562601 LIMCH1Q9UPQ0 1083 aa6.59□□□□□ -1.35
CDH13-206ENST00000562601 WDR81Q562E7 1941 aa6.58□□□□□ -1.36
CDH13-206ENST00000562601 MROH7Q68CQ1 1323 aa6.58□□□□□ -1.36
CDH13-206ENST00000562601 STK36Q9NRP7 1315 aa6.58□□□□□ -1.36
CDH13-206ENST00000562601 GSTTP1A0A1W2PQM5 241 aa6.58□□□□□ -1.36
CDH13-206ENST00000562601 M0R082 166 aa6.58□□□□□ -1.36
CDH13-206ENST00000562601 MEIS1O00470 390 aa6.58□□□□□ -1.36
CDH13-206ENST00000562601 KIAA0355O15063 1070 aa6.58□□□□□ -1.36
CDH13-206ENST00000562601 EDIL3O43854 480 aa6.58□□□□□ -1.36
CDH13-206ENST00000562601 KPNA6O60684 536 aa6.58□□□□□ -1.36
CDH13-206ENST00000562601 TIMP1P01033 207 aa6.58□□□□□ -1.36
CDH13-206ENST00000562601 LGALS2P05162 132 aa6.58□□□□□ -1.36
CDH13-206ENST00000562601 CYP3A4P08684 503 aa6.58□□□□□ -1.36
CDH13-206ENST00000562601 ACRP10323 421 aa6.58□□□□□ -1.36
CDH13-206ENST00000562601 RAG1P15918 1043 aa6.58□□□□□ -1.36
CDH13-206ENST00000562601 EPHB4P54760 987 aa6.58□□□□□ -1.36
CDH13-206ENST00000562601 CCL23P55773 120 aa6.58□□□□□ -1.36
CDH13-206ENST00000562601 GUCY1B3Q02153 619 aa6.58□□□□□ -1.36
CDH13-206ENST00000562601 RABEP1Q15276 862 aa6.58□□□□□ -1.36
CDH13-206ENST00000562601 TRIP4Q15650 581 aaPredicted RBP6.58□□□□□ -1.36
CDH13-206ENST00000562601 PTGISQ16647 500 aa6.58□□□□□ -1.36
CDH13-206ENST00000562601 KIAA0753Q2KHM9 967 aa6.58□□□□□ -1.36
CDH13-206ENST00000562601 PRR16Q569H4 304 aa6.58□□□□□ -1.36
CDH13-206ENST00000562601 EARS2Q5JPH6 523 aaKnown RBP6.58□□□□□ -1.36
CDH13-206ENST00000562601 GDF6Q6KF10 455 aaPredicted RBP6.58□□□□□ -1.36
CDH13-206ENST00000562601 PDE12Q6L8Q7 609 aaKnown RBP6.58□□□□□ -1.36
CDH13-206ENST00000562601 METTL7BQ6UX53 244 aa6.58□□□□□ -1.36
CDH13-206ENST00000562601 GLYCTKQ8IVS8 523 aa6.58□□□□□ -1.36
CDH13-206ENST00000562601 C7orf31Q8N865 590 aa6.58□□□□□ -1.36
CDH13-206ENST00000562601 ZNF417Q8TAU3 575 aa6.58□□□□□ -1.36
CDH13-206ENST00000562601 TBCKQ8TEA7 893 aa6.58□□□□□ -1.36
CDH13-206ENST00000562601 EDEM1Q92611 657 aa6.58□□□□□ -1.36
CDH13-206ENST00000562601 TBC1D32Q96NH3 1257 aa6.58□□□□□ -1.36
CDH13-206ENST00000562601 ZNF587Q96SQ5 575 aaPredicted RBP6.58□□□□□ -1.36
CDH13-206ENST00000562601 GDF15Q99988 308 aa6.58□□□□□ -1.36
CDH13-206ENST00000562601 C16orf70Q9BSU1 422 aa6.58□□□□□ -1.36
CDH13-206ENST00000562601 PHF20Q9BVI0 1012 aa6.58□□□□□ -1.36
CDH13-206ENST00000562601 RBSNQ9H1K0 784 aa6.58□□□□□ -1.36
CDH13-206ENST00000562601 AGO4Q9HCK5 861 aaKnown RBP6.58□□□□□ -1.36
CDH13-206ENST00000562601 HDAC6Q9UBN7 1215 aa6.58□□□□□ -1.36
CDH13-206ENST00000562601 TBX21Q9UL17 535 aa6.58□□□□□ -1.36
CDH13-206ENST00000562601 MYH9P35579 1960 aaKnown RBP6.57□□□□□ -1.36
CDH13-206ENST00000562601 IGLV3-22A0A075B6J6 115 aa6.57□□□□□ -1.36
CDH13-206ENST00000562601 H3BRB1 525 aa6.57□□□□□ -1.36
CDH13-206ENST00000562601 ICMTO60725 284 aa6.57□□□□□ -1.36
CDH13-206ENST00000562601 LILRB5O75023 590 aa6.57□□□□□ -1.36
CDH13-206ENST00000562601 PPFIA4O75335 1185 aa6.57□□□□□ -1.36
CDH13-206ENST00000562601 CCNE2O96020 404 aa6.57□□□□□ -1.36
CDH13-206ENST00000562601 HOXD8P13378 290 aaPredicted RBP6.57□□□□□ -1.36
CDH13-206ENST00000562601 CSF2RAP15509 400 aa6.57□□□□□ -1.36
CDH13-206ENST00000562601 HOXB4P17483 251 aaPredicted RBP6.57□□□□□ -1.36
CDH13-206ENST00000562601 XBP1P17861 261 aa6.57□□□□□ -1.36
CDH13-206ENST00000562601 MARK3P27448 753 aa6.57□□□□□ -1.36
CDH13-206ENST00000562601 TCF7P36402 384 aaPredicted RBP6.57□□□□□ -1.36
CDH13-206ENST00000562601 DNM1Q05193 864 aaKnown RBP6.57□□□□□ -1.36
CDH13-206ENST00000562601 EHHADHQ08426 723 aa6.57□□□□□ -1.36
CDH13-206ENST00000562601 ZNF211Q13398 564 aaPredicted RBP6.57□□□□□ -1.36
CDH13-206ENST00000562601 MTMR3Q13615 1198 aa6.57□□□□□ -1.36
CDH13-206ENST00000562601 INF2Q27J81 1249 aa6.57□□□□□ -1.36
CDH13-206ENST00000562601 C9orf50Q5SZB4 431 aa6.57□□□□□ -1.36
CDH13-206ENST00000562601 TTC39BQ5VTQ0 682 aaPredicted RBP6.57□□□□□ -1.36
CDH13-206ENST00000562601 NFRKBQ6P4R8 1299 aa6.57□□□□□ -1.36
CDH13-206ENST00000562601 LINC00114Q6XXX2 140 aa6.57□□□□□ -1.36
CDH13-206ENST00000562601 PIK3AP1Q6ZUJ8 805 aa6.57□□□□□ -1.36
CDH13-206ENST00000562601 TRMT1LQ7Z2T5 733 aaKnown RBP6.57□□□□□ -1.36
CDH13-206ENST00000562601 FAM35AQ86V20 835 aa6.57□□□□□ -1.36
CDH13-206ENST00000562601 TMEM151AQ8N4L1 468 aa6.57□□□□□ -1.36
CDH13-206ENST00000562601 GIMAP8Q8ND71 665 aaPredicted RBP6.57□□□□□ -1.36
CDH13-206ENST00000562601 CRYGNQ8WXF5 182 aa6.57□□□□□ -1.36
CDH13-206ENST00000562601 SEPT1Q8WYJ6 367 aa6.57□□□□□ -1.36
CDH13-206ENST00000562601 WASF1Q92558 559 aa6.57□□□□□ -1.36
CDH13-206ENST00000562601 SCLYQ96I15 445 aa6.57□□□□□ -1.36
CDH13-206ENST00000562601 CDHR1Q96JP9 859 aa6.57□□□□□ -1.36
CDH13-206ENST00000562601 ZSCAN31Q96LW9 406 aaPredicted RBP6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms