RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 MIGA2Q7L4E1 593 aa4.86□□□□□ -1.63
HERC1-211ENST00000560983 FIBCD1Q8N539 461 aa4.86□□□□□ -1.63
HERC1-211ENST00000560983 PLBD2Q8NHP8 589 aa4.86□□□□□ -1.63
HERC1-211ENST00000560983 FEZF2Q8TBJ5 459 aa4.86□□□□□ -1.63
HERC1-211ENST00000560983 RNPC3Q96LT9 517 aaKnown RBP4.86□□□□□ -1.63
HERC1-211ENST00000560983 PWWP2AQ96N64 755 aa4.86□□□□□ -1.63
HERC1-211ENST00000560983 PTCHD1Q96NR3 888 aa4.86□□□□□ -1.63
HERC1-211ENST00000560983 KCNH6Q9H252 994 aa4.86□□□□□ -1.63
HERC1-211ENST00000560983 PDLIM7Q9NR12 457 aa4.86□□□□□ -1.63
HERC1-211ENST00000560983 ZNF112Q9UJU3 913 aa4.86□□□□□ -1.63
HERC1-211ENST00000560983 PPT2Q9UMR5 302 aa4.86□□□□□ -1.63
HERC1-211ENST00000560983 KNSTRNQ9Y448 316 aa4.86□□□□□ -1.63
HERC1-211ENST00000560983 PCDHGB7Q9Y5F8 929 aa4.86□□□□□ -1.63
HERC1-211ENST00000560983 CHD7Q9P2D1 2997 aa4.86□□□□□ -1.63
HERC1-211ENST00000560983 GRXCR1A8MXD5 290 aa4.85□□□□□ -1.63
HERC1-211ENST00000560983 SNAP23O00161 211 aa4.85□□□□□ -1.63
HERC1-211ENST00000560983 PDE8AO60658 829 aa4.85□□□□□ -1.63
HERC1-211ENST00000560983 IL1R1P14778 569 aa4.85□□□□□ -1.63
HERC1-211ENST00000560983 IFNGR1P15260 489 aa4.85□□□□□ -1.63
HERC1-211ENST00000560983 NOP2P46087 812 aaKnown RBP4.85□□□□□ -1.63
HERC1-211ENST00000560983 SOX9P48436 509 aa4.85□□□□□ -1.63
HERC1-211ENST00000560983 NCKAP1LP55160 1127 aa4.85□□□□□ -1.63
HERC1-211ENST00000560983 ZNF200P98182 395 aaPredicted RBP4.85□□□□□ -1.63
HERC1-211ENST00000560983 NFKB2Q00653 900 aa4.85□□□□□ -1.63
HERC1-211ENST00000560983 AAK1Q2M2I8 961 aa4.85□□□□□ -1.63
HERC1-211ENST00000560983 VMACQ2NL98 169 aa4.85□□□□□ -1.63
HERC1-211ENST00000560983 FRMD5Q7Z6J6 570 aa4.85□□□□□ -1.63
HERC1-211ENST00000560983 PRRT2Q7Z6L0 340 aaPredicted RBP4.85□□□□□ -1.63
HERC1-211ENST00000560983 ANKRD13CQ8N6S4 541 aa4.85□□□□□ -1.63
HERC1-211ENST00000560983 BRF1Q92994 677 aa4.85□□□□□ -1.63
HERC1-211ENST00000560983 FERD3LQ96RJ6 166 aa4.85□□□□□ -1.63
HERC1-211ENST00000560983 MCMBPQ9BTE3 642 aa4.85□□□□□ -1.63
HERC1-211ENST00000560983 RNF38Q9H0F5 515 aa4.85□□□□□ -1.63
HERC1-211ENST00000560983 KLHL25Q9H0H3 589 aa4.85□□□□□ -1.63
HERC1-211ENST00000560983 PLA2G2DQ9UNK4 145 aa4.85□□□□□ -1.63
HERC1-211ENST00000560983 JAG2Q9Y219 1238 aa4.85□□□□□ -1.63
HERC1-211ENST00000560983 DIS3Q9Y2L1 958 aaKnown RBP4.85□□□□□ -1.63
HERC1-211ENST00000560983 SLC45A1Q9Y2W3 748 aa4.85□□□□□ -1.63
HERC1-211ENST00000560983 SF3B6Q9Y3B4 125 aaKnown RBP4.85□□□□□ -1.63
HERC1-211ENST00000560983 DDX60Q8IY21 1712 aaKnown RBP4.85□□□□□ -1.63
HERC1-211ENST00000560983 LAMB2P55268 1798 aa4.85□□□□□ -1.63
HERC1-211ENST00000560983 ZC3H12DA2A288 527 aaKnown RBP4.84□□□□□ -1.63
HERC1-211ENST00000560983 RECKO95980 971 aa4.84□□□□□ -1.63
HERC1-211ENST00000560983 PLA2G1BP04054 148 aaKnown RBP4.84□□□□□ -1.63
HERC1-211ENST00000560983 GLI4P10075 376 aa4.84□□□□□ -1.63
HERC1-211ENST00000560983 ITGA4P13612 1032 aa4.84□□□□□ -1.63
HERC1-211ENST00000560983 ATF2P15336 505 aa4.84□□□□□ -1.63
HERC1-211ENST00000560983 CYP2B6P20813 491 aa4.84□□□□□ -1.63
HERC1-211ENST00000560983 CACNB3P54284 484 aa4.84□□□□□ -1.63
HERC1-211ENST00000560983 POU4F1Q01851 419 aa4.84□□□□□ -1.63
HERC1-211ENST00000560983 DLX2Q07687 328 aaPredicted RBP4.84□□□□□ -1.63
HERC1-211ENST00000560983 TARBP2Q15633 366 aaKnown RBP4.84□□□□□ -1.63
HERC1-211ENST00000560983 NOL9Q5SY16 702 aaKnown RBP4.84□□□□□ -1.63
HERC1-211ENST00000560983 SLC39A5Q6ZMH5 540 aa4.84□□□□□ -1.63
HERC1-211ENST00000560983 C16orf59Q7L2K0 433 aa4.84□□□□□ -1.63
HERC1-211ENST00000560983 FASTKD5Q7L8L6 764 aaKnown RBP4.84□□□□□ -1.63
HERC1-211ENST00000560983 NAT16Q8N8M0 369 aa4.84□□□□□ -1.63
HERC1-211ENST00000560983 C19orf47Q8N9M1 422 aaKnown RBP4.84□□□□□ -1.63
HERC1-211ENST00000560983 SYT8Q8NBV8 401 aa4.84□□□□□ -1.63
HERC1-211ENST00000560983 RASGRP4Q8TDF6 673 aa4.84□□□□□ -1.63
HERC1-211ENST00000560983 USP6NLQ92738 828 aa4.84□□□□□ -1.63
HERC1-211ENST00000560983 ATP11BQ9Y2G3 1177 aa4.84□□□□□ -1.63
HERC1-211ENST00000560983 HCFC2Q9Y5Z7 792 aa4.84□□□□□ -1.63
HERC1-211ENST00000560983 CFAP47Q6ZTR5 3102 aa4.84□□□□□ -1.63
HERC1-211ENST00000560983 DDX60LQ5H9U9 1706 aaKnown RBP4.83□□□□□ -1.64
HERC1-211ENST00000560983 CACNA1GO43497 2377 aa4.83□□□□□ -1.64
HERC1-211ENST00000560983 SH3D21A4FU49 640 aa4.83□□□□□ -1.64
HERC1-211ENST00000560983 DNM1LO00429 736 aa4.83□□□□□ -1.64
HERC1-211ENST00000560983 AURKAO14965 403 aa4.83□□□□□ -1.64
HERC1-211ENST00000560983 PFKLP17858 780 aa4.83□□□□□ -1.64
HERC1-211ENST00000560983 L1CAMP32004 1257 aa4.83□□□□□ -1.64
HERC1-211ENST00000560983 LIMS1P48059 325 aa4.83□□□□□ -1.64
HERC1-211ENST00000560983 GIPRP48546 466 aa4.83□□□□□ -1.64
HERC1-211ENST00000560983 CCL14Q16627 93 aa4.83□□□□□ -1.64
HERC1-211ENST00000560983 FAM110CQ1W6H9 321 aa4.83□□□□□ -1.64
HERC1-211ENST00000560983 TRIM60Q495X7 471 aa4.83□□□□□ -1.64
HERC1-211ENST00000560983 ZFYVE27Q5T4F4 411 aa4.83□□□□□ -1.64
HERC1-211ENST00000560983 C15orf52Q6ZUT6 534 aaKnown RBP4.83□□□□□ -1.64
HERC1-211ENST00000560983 METTL16Q86W50 562 aaKnown RBP4.83□□□□□ -1.64
HERC1-211ENST00000560983 TTLL11Q8NHH1 800 aa4.83□□□□□ -1.64
HERC1-211ENST00000560983 SMCR8Q8TEV9 937 aaPredicted RBP4.83□□□□□ -1.64
HERC1-211ENST00000560983 FNIP1Q8TF40 1166 aa4.83□□□□□ -1.64
HERC1-211ENST00000560983 HERVK_113Q902F9 699 aa4.83□□□□□ -1.64
HERC1-211ENST00000560983 RNF34Q969K3 372 aa4.83□□□□□ -1.64
HERC1-211ENST00000560983 TSPAN17Q96FV3 270 aa4.83□□□□□ -1.64
HERC1-211ENST00000560983 UIMC1Q96RL1 719 aa4.83□□□□□ -1.64
HERC1-211ENST00000560983 CDC5LQ99459 802 aaKnown RBP4.83□□□□□ -1.64
HERC1-211ENST00000560983 HAUS7Q99871 368 aa4.83□□□□□ -1.64
HERC1-211ENST00000560983 ZNF341Q9BYN7 854 aa4.83□□□□□ -1.64
HERC1-211ENST00000560983 NOL6Q9H6R4 1146 aaKnown RBP4.83□□□□□ -1.64
HERC1-211ENST00000560983 GREM2Q9H772 168 aa4.83□□□□□ -1.64
HERC1-211ENST00000560983 WHRNQ9P202 907 aa4.83□□□□□ -1.64
HERC1-211ENST00000560983 AFG3L2Q9Y4W6 797 aa4.83□□□□□ -1.64
HERC1-211ENST00000560983 ZHX2Q9Y6X8 837 aa4.83□□□□□ -1.64
HERC1-211ENST00000560983 PSME4Q14997 1843 aa4.83□□□□□ -1.64
HERC1-211ENST00000560983 RPAP1Q9BWH6 1393 aaPredicted RBP4.82□□□□□ -1.64
HERC1-211ENST00000560983 KIAA0355O15063 1070 aa4.82□□□□□ -1.64
HERC1-211ENST00000560983 TP53P04637 393 aaPredicted RBP4.82□□□□□ -1.64
HERC1-211ENST00000560983 PCCAP05165 728 aaPredicted RBP4.82□□□□□ -1.64
HERC1-211ENST00000560983 CD3EP07766 207 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms