RNA–Protein interactions for RNA: ENST00000560634.1

CSPG4P11-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 11, humanhuman

BASIC

Gene CSPG4P11, Length 4,910 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P11-201ENST00000560634 HEATR6Q6AI08 1181 aaKnown RBP14.04□□□□□ -0.16
CSPG4P11-201ENST00000560634 RGS9BPQ6ZS82 235 aa14.04□□□□□ -0.16
CSPG4P11-201ENST00000560634 TMCO5AQ8N6Q1 288 aa14.04□□□□□ -0.16
CSPG4P11-201ENST00000560634 TTLL11Q8NHH1 800 aa14.04□□□□□ -0.16
CSPG4P11-201ENST00000560634 RFFLQ8WZ73 363 aa14.04□□□□□ -0.16
CSPG4P11-201ENST00000560634 DDX47Q9H0S4 455 aaKnown RBP14.04□□□□□ -0.16
CSPG4P11-201ENST00000560634 RFX7Q2KHR2 1363 aa14.04□□□□□ -0.16
CSPG4P11-201ENST00000560634 DIAPH2O60879 1101 aa14.04□□□□□ -0.16
CSPG4P11-201ENST00000560634 HUS1O60921 280 aa14.04□□□□□ -0.16
CSPG4P11-201ENST00000560634 SFNP31947 248 aa14.04□□□□□ -0.16
CSPG4P11-201ENST00000560634 PHKA2P46019 1235 aa14.04□□□□□ -0.16
CSPG4P11-201ENST00000560634 GRAPQ13588 217 aa14.04□□□□□ -0.16
CSPG4P11-201ENST00000560634 KRT33BQ14525 404 aa14.04□□□□□ -0.16
CSPG4P11-201ENST00000560634 PARP9Q8IXQ6 854 aa14.04□□□□□ -0.16
CSPG4P11-201ENST00000560634 GRAPLQ8TC17 118 aaPredicted RBP14.04□□□□□ -0.16
CSPG4P11-201ENST00000560634 KIF2CQ99661 725 aa14.04□□□□□ -0.16
CSPG4P11-201ENST00000560634 DBNDD1Q9H9R9 158 aa14.04□□□□□ -0.16
CSPG4P11-201ENST00000560634 DCTN4Q9UJW0 460 aa14.04□□□□□ -0.16
CSPG4P11-201ENST00000560634 SUFUQ9UMX1 484 aa14.04□□□□□ -0.16
CSPG4P11-201ENST00000560634 MORC2Q9Y6X9 1032 aaPredicted RBP14.04□□□□□ -0.16
CSPG4P11-201ENST00000560634 SFI1A8K8P3 1242 aa14.03□□□□□ -0.16
CSPG4P11-201ENST00000560634 PCYT1AP49585 367 aa14.03□□□□□ -0.16
CSPG4P11-201ENST00000560634 NEK2P51955 445 aa14.03□□□□□ -0.16
CSPG4P11-201ENST00000560634 MRPS25P82663 173 aaKnown RBP14.03□□□□□ -0.16
CSPG4P11-201ENST00000560634 MAP3K10Q02779 954 aa14.03□□□□□ -0.16
CSPG4P11-201ENST00000560634 COASYQ13057 564 aa14.03□□□□□ -0.16
CSPG4P11-201ENST00000560634 PIGOQ8TEQ8 1089 aa14.03□□□□□ -0.16
CSPG4P11-201ENST00000560634 RNF25Q96BH1 459 aaPredicted RBP14.03□□□□□ -0.16
CSPG4P11-201ENST00000560634 NUP85Q9BW27 656 aa14.03□□□□□ -0.16
CSPG4P11-201ENST00000560634 VAMP7P51809 220 aa14.03□□□□□ -0.16
CSPG4P11-201ENST00000560634 BYSLQ13895 437 aaKnown RBP14.03□□□□□ -0.16
CSPG4P11-201ENST00000560634 ZC3H12BQ5HYM0 836 aaKnown RBP14.03□□□□□ -0.16
CSPG4P11-201ENST00000560634 IFT43Q96FT9 208 aa14.03□□□□□ -0.16
CSPG4P11-201ENST00000560634 PAWRQ96IZ0 340 aaKnown RBP14.03□□□□□ -0.16
CSPG4P11-201ENST00000560634 PDLIM2Q96JY6 352 aa14.03□□□□□ -0.16
CSPG4P11-201ENST00000560634 C2orf40Q9H1Z8 148 aa14.03□□□□□ -0.16
CSPG4P11-201ENST00000560634 ADA2Q9NZK5 511 aa14.03□□□□□ -0.16
CSPG4P11-201ENST00000560634 TTC26A0AVF1 554 aa14.03□□□□□ -0.16
CSPG4P11-201ENST00000560634 TRIM49BA6NDI0 452 aa14.03□□□□□ -0.16
CSPG4P11-201ENST00000560634 KRT14P02533 472 aa14.03□□□□□ -0.16
CSPG4P11-201ENST00000560634 FTLP02792 175 aaPredicted RBP14.03□□□□□ -0.16
CSPG4P11-201ENST00000560634 AP3M2P53677 418 aa14.03□□□□□ -0.16
CSPG4P11-201ENST00000560634 MTMR1Q13613 665 aa14.03□□□□□ -0.16
CSPG4P11-201ENST00000560634 DRAP1Q14919 205 aaPredicted RBP14.03□□□□□ -0.16
CSPG4P11-201ENST00000560634 GPR162Q16538 588 aa14.03□□□□□ -0.16
CSPG4P11-201ENST00000560634 CLEC4GQ6UXB4 293 aa14.03□□□□□ -0.16
CSPG4P11-201ENST00000560634 YIPF3Q9GZM5 350 aa14.03□□□□□ -0.16
CSPG4P11-201ENST00000560634 APOA1P02647 267 aa14.03□□□□□ -0.16
CSPG4P11-201ENST00000560634 GPS1Q13098 491 aa14.03□□□□□ -0.16
CSPG4P11-201ENST00000560634 ALX1Q15699 326 aa14.03□□□□□ -0.16
CSPG4P11-201ENST00000560634 ZNF394Q53GI3 561 aa14.03□□□□□ -0.16
CSPG4P11-201ENST00000560634 HPCAL4Q9UM19 191 aa14.03□□□□□ -0.16
CSPG4P11-201ENST00000560634 INPP5FQ9Y2H2 1132 aa14.03□□□□□ -0.16
CSPG4P11-201ENST00000560634 SAMD9Q5K651 1589 aa14.02□□□□□ -0.16
CSPG4P11-201ENST00000560634 ANKRD65E5RJM6 399 aa14.02□□□□□ -0.16
CSPG4P11-201ENST00000560634 IL10P22301 178 aa14.02□□□□□ -0.16
CSPG4P11-201ENST00000560634 KCNJ6P48051 423 aa14.02□□□□□ -0.16
CSPG4P11-201ENST00000560634 PDIA2Q13087 525 aaKnown RBP14.02□□□□□ -0.16
CSPG4P11-201ENST00000560634 PTK2BQ14289 1009 aa14.02□□□□□ -0.16
CSPG4P11-201ENST00000560634 STXBP2Q15833 593 aa14.02□□□□□ -0.16
CSPG4P11-201ENST00000560634 NFRKBQ6P4R8 1299 aa14.02□□□□□ -0.16
CSPG4P11-201ENST00000560634 CCDC137Q6PK04 289 aaKnown RBP14.02□□□□□ -0.16
CSPG4P11-201ENST00000560634 BEST2Q8NFU1 509 aa14.02□□□□□ -0.16
CSPG4P11-201ENST00000560634 ALKBH8Q96BT7 664 aaKnown RBP14.02□□□□□ -0.16
CSPG4P11-201ENST00000560634 PNMA3Q9UL41 463 aa14.02□□□□□ -0.16
CSPG4P11-201ENST00000560634 ATP7BP35670 1465 aa14.02□□□□□ -0.16
CSPG4P11-201ENST00000560634 GNAT1P11488 350 aa14.02□□□□□ -0.16
CSPG4P11-201ENST00000560634 IREB2P48200 963 aaKnown RBP14.02□□□□□ -0.16
CSPG4P11-201ENST00000560634 TTC23LQ6PF05 361 aa14.02□□□□□ -0.16
CSPG4P11-201ENST00000560634 FAM196AQ6ZSG2 479 aa14.02□□□□□ -0.16
CSPG4P11-201ENST00000560634 TMEM47Q9BQJ4 181 aa14.02□□□□□ -0.16
CSPG4P11-201ENST00000560634 CCDC90BQ9GZT6 254 aa14.02□□□□□ -0.16
CSPG4P11-201ENST00000560634 SLC9A2Q9UBY0 812 aa14.02□□□□□ -0.16
CSPG4P11-201ENST00000560634 TTC7AQ9ULT0 858 aaPredicted RBP14.02□□□□□ -0.16
CSPG4P11-201ENST00000560634 SPATA31E1Q6ZUB1 1445 aa14.02□□□□□ -0.16
CSPG4P11-201ENST00000560634 POTEMA6NI47 508 aa14.02□□□□□ -0.17
CSPG4P11-201ENST00000560634 RASSF10A6NK89 507 aa14.02□□□□□ -0.17
CSPG4P11-201ENST00000560634 P4HBP07237 508 aaKnown RBP14.02□□□□□ -0.17
CSPG4P11-201ENST00000560634 KCNA4P22459 653 aa14.02□□□□□ -0.17
CSPG4P11-201ENST00000560634 TYK2P29597 1187 aa14.02□□□□□ -0.17
CSPG4P11-201ENST00000560634 TBCCQ15814 346 aa14.02□□□□□ -0.17
CSPG4P11-201ENST00000560634 SYDE1Q6ZW31 735 aaPredicted RBP14.02□□□□□ -0.17
CSPG4P11-201ENST00000560634 EEPD1Q7L9B9 569 aa14.02□□□□□ -0.17
CSPG4P11-201ENST00000560634 ECT2Q9H8V3 914 aa14.02□□□□□ -0.17
CSPG4P11-201ENST00000560634 MRFAP1Q9Y605 127 aa14.02□□□□□ -0.17
CSPG4P11-201ENST00000560634 PIK3R2O00459 728 aa14.02□□□□□ -0.17
CSPG4P11-201ENST00000560634 RAD23BP54727 409 aa14.02□□□□□ -0.17
CSPG4P11-201ENST00000560634 HABP4Q5JVS0 413 aaKnown RBP14.02□□□□□ -0.17
CSPG4P11-201ENST00000560634 SLC26A7Q8TE54 656 aa14.02□□□□□ -0.17
CSPG4P11-201ENST00000560634 VIPAS39Q9H9C1 493 aa14.02□□□□□ -0.17
CSPG4P11-201ENST00000560634 ABCF3Q9NUQ8 709 aa14.02□□□□□ -0.17
CSPG4P11-201ENST00000560634 NEO1Q92859 1461 aa14.02□□□□□ -0.17
CSPG4P11-201ENST00000560634 ESRRBO95718 433 aa14.01□□□□□ -0.17
CSPG4P11-201ENST00000560634 PDHA1P08559 390 aa14.01□□□□□ -0.17
CSPG4P11-201ENST00000560634 STAT3P40763 770 aa14.01□□□□□ -0.17
CSPG4P11-201ENST00000560634 PSMC1P62191 440 aaKnown RBP14.01□□□□□ -0.17
CSPG4P11-201ENST00000560634 RNF219Q5W0B1 726 aaPredicted RBP14.01□□□□□ -0.17
CSPG4P11-201ENST00000560634 PATL1Q86TB9 770 aaKnown RBP14.01□□□□□ -0.17
CSPG4P11-201ENST00000560634 SPATA4Q8NEY3 305 aa14.01□□□□□ -0.17
CSPG4P11-201ENST00000560634 RMDN3Q96TC7 470 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms