RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 LINC00271P0C7V0 271 aa9.09□□□□□ -0.95
SNX1-207ENST00000559401 LIG1P18858 919 aa9.09□□□□□ -0.95
SNX1-207ENST00000559401 PDCP20941 246 aa9.09□□□□□ -0.95
SNX1-207ENST00000559401 GLRA2P23416 452 aa9.09□□□□□ -0.95
SNX1-207ENST00000559401 RNASELQ05823 741 aaKnown RBP9.09□□□□□ -0.95
SNX1-207ENST00000559401 PDIA5Q14554 519 aa9.09□□□□□ -0.95
SNX1-207ENST00000559401 NAALADL2Q58DX5 795 aa9.09□□□□□ -0.95
SNX1-207ENST00000559401 CLLU1OSQ5K130 101 aa9.09□□□□□ -0.95
SNX1-207ENST00000559401 PADI6Q6TGC4 694 aa9.09□□□□□ -0.95
SNX1-207ENST00000559401 ZBTB8OSQ8IWT0 167 aa9.09□□□□□ -0.95
SNX1-207ENST00000559401 C4orf32Q8N8J7 132 aa9.09□□□□□ -0.95
SNX1-207ENST00000559401 COLGALT1Q8NBJ5 622 aa9.09□□□□□ -0.95
SNX1-207ENST00000559401 MICAL1Q8TDZ2 1067 aa9.09□□□□□ -0.95
SNX1-207ENST00000559401 POF1BQ8WVV4 589 aa9.09□□□□□ -0.95
SNX1-207ENST00000559401 PPP2R3CQ969Q6 453 aa9.09□□□□□ -0.95
SNX1-207ENST00000559401 PGBD4Q96DM1 585 aa9.09□□□□□ -0.95
SNX1-207ENST00000559401 CDK5RAP3Q96JB5 506 aa9.09□□□□□ -0.95
SNX1-207ENST00000559401 CASD1Q96PB1 797 aa9.09□□□□□ -0.95
SNX1-207ENST00000559401 MRPL9Q9BYD2 267 aaKnown RBP9.09□□□□□ -0.95
SNX1-207ENST00000559401 BHMT2Q9H2M3 363 aa9.09□□□□□ -0.95
SNX1-207ENST00000559401 FAM105AQ9NUU6 356 aa9.09□□□□□ -0.95
SNX1-207ENST00000559401 PLAGL2Q9UPG8 496 aa9.09□□□□□ -0.95
SNX1-207ENST00000559401 TCF20Q9UGU0 1960 aaKnown RBP9.09□□□□□ -0.95
SNX1-207ENST00000559401 TRANK1O15050 2925 aa9.09□□□□□ -0.95
SNX1-207ENST00000559401 COL6A3P12111 3177 aa9.09□□□□□ -0.95
SNX1-207ENST00000559401 CHD7Q9P2D1 2997 aa9.09□□□□□ -0.95
SNX1-207ENST00000559401 K7ELQ4 463 aaPredicted RBP9.08□□□□□ -0.96
SNX1-207ENST00000559401 TSPAN1O60635 241 aa9.08□□□□□ -0.96
SNX1-207ENST00000559401 ZC3H11AO75152 810 aaKnown RBP eCLIP9.08□□□□□ -0.96
SNX1-207ENST00000559401 EOMESO95936 686 aa9.08□□□□□ -0.96
SNX1-207ENST00000559401 SSBP05455 408 aaKnown RBP eCLIP9.08□□□□□ -0.96
SNX1-207ENST00000559401 ATF7P17544 494 aaPredicted RBP9.08□□□□□ -0.96
SNX1-207ENST00000559401 MUTP22033 750 aa9.08□□□□□ -0.96
SNX1-207ENST00000559401 KCNA5P22460 613 aa9.08□□□□□ -0.96
SNX1-207ENST00000559401 CDC25AP30304 524 aa9.08□□□□□ -0.96
SNX1-207ENST00000559401 CA8P35219 290 aa9.08□□□□□ -0.96
SNX1-207ENST00000559401 ARL2P36404 184 aa9.08□□□□□ -0.96
SNX1-207ENST00000559401 PBX3P40426 434 aa9.08□□□□□ -0.96
SNX1-207ENST00000559401 PRPHP41219 470 aa9.08□□□□□ -0.96
SNX1-207ENST00000559401 KCNQ1P51787 676 aa9.08□□□□□ -0.96
SNX1-207ENST00000559401 PTENP60484 403 aa9.08□□□□□ -0.96
SNX1-207ENST00000559401 ATP2C1P98194 919 aaPredicted RBP9.08□□□□□ -0.96
SNX1-207ENST00000559401 CUL4AQ13619 759 aa9.08□□□□□ -0.96
SNX1-207ENST00000559401 ECM1Q16610 540 aa9.08□□□□□ -0.96
SNX1-207ENST00000559401 CSPP1Q1MSJ5 1256 aa9.08□□□□□ -0.96
SNX1-207ENST00000559401 NOTUMQ6P988 496 aa9.08□□□□□ -0.96
SNX1-207ENST00000559401 GLB1LQ6UWU2 654 aa9.08□□□□□ -0.96
SNX1-207ENST00000559401 BRAPQ7Z569 592 aa9.08□□□□□ -0.96
SNX1-207ENST00000559401 ZNF598Q86UK7 904 aaKnown RBP9.08□□□□□ -0.96
SNX1-207ENST00000559401 IGSF22Q8N9C0 903 aa9.08□□□□□ -0.96
SNX1-207ENST00000559401 RASSF8Q8NHQ8 419 aa9.08□□□□□ -0.96
SNX1-207ENST00000559401 URGCPQ8TCY9 931 aa9.08□□□□□ -0.96
SNX1-207ENST00000559401 ADAMTS19Q8TE59 1207 aa9.08□□□□□ -0.96
SNX1-207ENST00000559401 CPB2Q96IY4 423 aa9.08□□□□□ -0.96
SNX1-207ENST00000559401 ZNF558Q96NG5 402 aa9.08□□□□□ -0.96
SNX1-207ENST00000559401 APOL6Q9BWW8 343 aa9.08□□□□□ -0.96
SNX1-207ENST00000559401 TRIM6Q9C030 488 aaPredicted RBP9.08□□□□□ -0.96
SNX1-207ENST00000559401 GBP3Q9H0R5 595 aa9.08□□□□□ -0.96
SNX1-207ENST00000559401 IGFLR1Q9H665 355 aa9.08□□□□□ -0.96
SNX1-207ENST00000559401 CWH43Q9H720 699 aa9.08□□□□□ -0.96
SNX1-207ENST00000559401 UBE2ZQ9H832 354 aaPredicted RBP9.08□□□□□ -0.96
SNX1-207ENST00000559401 RNF19AQ9NV58 838 aa9.08□□□□□ -0.96
SNX1-207ENST00000559401 CLDND1Q9NY35 253 aa9.08□□□□□ -0.96
SNX1-207ENST00000559401 PCDHB2Q9Y5E7 798 aa9.08□□□□□ -0.96
SNX1-207ENST00000559401 MEIS3P2A8K0S8 358 aa9.07□□□□□ -0.96
SNX1-207ENST00000559401 E9PMD0 336 aa9.07□□□□□ -0.96
SNX1-207ENST00000559401 FGF18O76093 207 aa9.07□□□□□ -0.96
SNX1-207ENST00000559401 HSP90AA1P07900 732 aaKnown RBP9.07□□□□□ -0.96
SNX1-207ENST00000559401 ITGA4P13612 1032 aa9.07□□□□□ -0.96
SNX1-207ENST00000559401 CYP11B2P19099 503 aa9.07□□□□□ -0.96
SNX1-207ENST00000559401 DNAJB1P25685 340 aa9.07□□□□□ -0.96
SNX1-207ENST00000559401 AXLP30530 894 aa9.07□□□□□ -0.96
SNX1-207ENST00000559401 PPM1AP35813 382 aa9.07□□□□□ -0.96
SNX1-207ENST00000559401 MBTD1Q05BQ5 628 aa9.07□□□□□ -0.96
SNX1-207ENST00000559401 PPP2R5AQ15172 486 aa9.07□□□□□ -0.96
SNX1-207ENST00000559401 PCBP1Q15365 356 aaKnown RBP eCLIP9.07□□□□□ -0.96
SNX1-207ENST00000559401 KCNT2Q6UVM3 1135 aa9.07□□□□□ -0.96
SNX1-207ENST00000559401 LRRC55Q6ZSA7 311 aa9.07□□□□□ -0.96
SNX1-207ENST00000559401 CDR2LQ86X02 465 aaPredicted RBP9.07□□□□□ -0.96
SNX1-207ENST00000559401 HSCBQ8IWL3 235 aa9.07□□□□□ -0.96
SNX1-207ENST00000559401 DEPTORQ8TB45 409 aa9.07□□□□□ -0.96
SNX1-207ENST00000559401 SPPL3Q8TCT6 385 aa9.07□□□□□ -0.96
SNX1-207ENST00000559401 IFT74Q96LB3 600 aa9.07□□□□□ -0.96
SNX1-207ENST00000559401 PLIN2Q99541 437 aa9.07□□□□□ -0.96
SNX1-207ENST00000559401 RSAD1Q9HA92 442 aa9.07□□□□□ -0.96
SNX1-207ENST00000559401 POLD4Q9HCU8 107 aa9.07□□□□□ -0.96
SNX1-207ENST00000559401 ENTPD7Q9NQZ7 604 aa9.07□□□□□ -0.96
SNX1-207ENST00000559401 TLR9Q9NR96 1032 aa9.07□□□□□ -0.96
SNX1-207ENST00000559401 PUF60Q9UHX1 559 aaKnown RBP9.07□□□□□ -0.96
SNX1-207ENST00000559401 DNM3Q9UQ16 869 aa9.07□□□□□ -0.96
SNX1-207ENST00000559401 TDRD15B5MCY1 1934 aaKnown RBP9.07□□□□□ -0.96
SNX1-207ENST00000559401 MYH11P35749 1972 aa9.06□□□□□ -0.96
SNX1-207ENST00000559401 MYH15Q9Y2K3 1946 aa9.06□□□□□ -0.96
SNX1-207ENST00000559401 NT5C1B-RDH14C9J2C7 533 aa9.06□□□□□ -0.96
SNX1-207ENST00000559401 H3BQ06 376 aaPredicted RBP9.06□□□□□ -0.96
SNX1-207ENST00000559401 B4GALT5O43286 388 aa9.06□□□□□ -0.96
SNX1-207ENST00000559401 NPTXRO95502 500 aa9.06□□□□□ -0.96
SNX1-207ENST00000559401 EYA4O95677 639 aa9.06□□□□□ -0.96
SNX1-207ENST00000559401 BMP15O95972 392 aa9.06□□□□□ -0.96
SNX1-207ENST00000559401 ARF4P18085 180 aaPredicted RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms