RNA–Protein interactions for RNA: ENST00000559037.1

CASC4-207, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 680 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-207ENST00000559037 FAM9BQ8IZU0 186 aa6.28□□□□□ -1.4
CASC4-207ENST00000559037 CCDC191Q8NCU4 936 aa6.28□□□□□ -1.4
CASC4-207ENST00000559037 UBXN4Q92575 508 aa6.28□□□□□ -1.4
CASC4-207ENST00000559037 TSR2Q969E8 191 aaKnown RBP6.28□□□□□ -1.4
CASC4-207ENST00000559037 FAM89AQ96GI7 184 aa6.28□□□□□ -1.4
CASC4-207ENST00000559037 CHAMP1Q96JM3 812 aa6.28□□□□□ -1.4
CASC4-207ENST00000559037 CDC6Q99741 560 aa6.28□□□□□ -1.4
CASC4-207ENST00000559037 PHF20Q9BVI0 1012 aa6.28□□□□□ -1.4
CASC4-207ENST00000559037 RTFDC1Q9BY42 306 aaPredicted RBP6.28□□□□□ -1.4
CASC4-207ENST00000559037 CLDND1Q9NY35 253 aa6.28□□□□□ -1.4
CASC4-207ENST00000559037 SNTG2Q9NY99 539 aa6.28□□□□□ -1.4
CASC4-207ENST00000559037 COL4A1P02462 1669 aa6.28□□□□□ -1.4
CASC4-207ENST00000559037 ABCC4O15439 1325 aa6.27□□□□□ -1.41
CASC4-207ENST00000559037 ZNF541Q9H0D2 1346 aa6.27□□□□□ -1.41
CASC4-207ENST00000559037 PCNTO95613 3336 aa6.27□□□□□ -1.41
CASC4-207ENST00000559037 CCDC163A0A0D9SF12 145 aa6.27□□□□□ -1.41
CASC4-207ENST00000559037 CCDC85CA6NKD9 419 aa6.27□□□□□ -1.41
CASC4-207ENST00000559037 KRIT1O00522 736 aa6.27□□□□□ -1.41
CASC4-207ENST00000559037 TCERG1O14776 1098 aaKnown RBP6.27□□□□□ -1.41
CASC4-207ENST00000559037 HGSO14964 777 aaPredicted RBP6.27□□□□□ -1.41
CASC4-207ENST00000559037 TWISTNBQ3B726 338 aaPredicted RBP6.27□□□□□ -1.41
CASC4-207ENST00000559037 KSR2Q6VAB6 950 aa6.27□□□□□ -1.41
CASC4-207ENST00000559037 DDX46Q7L014 1031 aaKnown RBP6.27□□□□□ -1.41
CASC4-207ENST00000559037 G2E3Q7L622 706 aa6.27□□□□□ -1.41
CASC4-207ENST00000559037 IFNL3Q8IZI9 196 aa6.27□□□□□ -1.41
CASC4-207ENST00000559037 GPC2Q8N158 579 aa6.27□□□□□ -1.41
CASC4-207ENST00000559037 JDP2Q8WYK2 163 aa6.27□□□□□ -1.41
CASC4-207ENST00000559037 DRC1Q96MC2 740 aa6.27□□□□□ -1.41
CASC4-207ENST00000559037 SRPK1Q96SB4 655 aaKnown RBP6.27□□□□□ -1.41
CASC4-207ENST00000559037 IRF2BPLQ9H1B7 796 aa6.27□□□□□ -1.41
CASC4-207ENST00000559037 OSBPL2Q9H1P3 480 aa6.27□□□□□ -1.41
CASC4-207ENST00000559037 TAF1DQ9H5J8 278 aaPredicted RBP6.27□□□□□ -1.41
CASC4-207ENST00000559037 RAPGEFL1Q9UHV5 662 aa6.27□□□□□ -1.41
CASC4-207ENST00000559037 HCFC2Q9Y5Z7 792 aa6.27□□□□□ -1.41
CASC4-207ENST00000559037 TRBV23-1A0A0A0MS06 115 aa6.26□□□□□ -1.41
CASC4-207ENST00000559037 PI4KAP2A4QPH2 592 aa6.26□□□□□ -1.41
CASC4-207ENST00000559037 AQP7O14520 342 aa6.26□□□□□ -1.41
CASC4-207ENST00000559037 SGSM2O43147 1006 aa6.26□□□□□ -1.41
CASC4-207ENST00000559037 DDX58O95786 925 aaKnown RBP6.26□□□□□ -1.41
CASC4-207ENST00000559037 APPP05067 770 aa6.26□□□□□ -1.41
CASC4-207ENST00000559037 PCCAP05165 728 aaPredicted RBP6.26□□□□□ -1.41
CASC4-207ENST00000559037 IGKV5-2P06315 115 aa6.26□□□□□ -1.41
CASC4-207ENST00000559037 LCP1P13796 627 aa6.26□□□□□ -1.41
CASC4-207ENST00000559037 RPS8P62241 208 aaKnown RBP6.26□□□□□ -1.41
CASC4-207ENST00000559037 FOXO4P98177 505 aa6.26□□□□□ -1.41
CASC4-207ENST00000559037 EXOSC9Q06265 439 aaKnown RBP6.26□□□□□ -1.41
CASC4-207ENST00000559037 GRAPQ13588 217 aa6.26□□□□□ -1.41
CASC4-207ENST00000559037 LBX2Q6XYB7 198 aa6.26□□□□□ -1.41
CASC4-207ENST00000559037 LCNL1Q6ZST4 164 aa6.26□□□□□ -1.41
CASC4-207ENST00000559037 FAM126BQ8IXS8 530 aa6.26□□□□□ -1.41
CASC4-207ENST00000559037 PI4KAP1Q8N8J0 262 aa6.26□□□□□ -1.41
CASC4-207ENST00000559037 JMYQ8N9B5 988 aa6.26□□□□□ -1.41
CASC4-207ENST00000559037 GRAPLQ8TC17 118 aaPredicted RBP6.26□□□□□ -1.41
CASC4-207ENST00000559037 CELF1Q92879 486 aaKnown RBP6.26□□□□□ -1.41
CASC4-207ENST00000559037 PTPRN2Q92932 1015 aa6.26□□□□□ -1.41
CASC4-207ENST00000559037 PWWP2AQ96N64 755 aa6.26□□□□□ -1.41
CASC4-207ENST00000559037 MYD88Q99836 296 aa6.26□□□□□ -1.41
CASC4-207ENST00000559037 ALG1Q9BT22 464 aa6.26□□□□□ -1.41
CASC4-207ENST00000559037 EPB41L4AQ9HCS5 686 aaPredicted RBP6.26□□□□□ -1.41
CASC4-207ENST00000559037 PALD1Q9ULE6 856 aa6.26□□□□□ -1.41
CASC4-207ENST00000559037 MAP3K2Q9Y2U5 619 aa6.26□□□□□ -1.41
CASC4-207ENST00000559037 DUOX1Q9NRD9 1551 aa6.26□□□□□ -1.41
CASC4-207ENST00000559037 A0A1B0GUL6 1792 aa6.26□□□□□ -1.41
CASC4-207ENST00000559037 FANCIQ9NVI1 1328 aa6.25□□□□□ -1.41
CASC4-207ENST00000559037 ZNF646O15015 1829 aaPredicted RBP6.25□□□□□ -1.41
CASC4-207ENST00000559037 CYP2C8P10632 490 aa6.25□□□□□ -1.41
CASC4-207ENST00000559037 HSP90B1P14625 803 aaKnown RBP6.25□□□□□ -1.41
CASC4-207ENST00000559037 GRK2P25098 689 aa6.25□□□□□ -1.41
CASC4-207ENST00000559037 GRK3P35626 688 aa6.25□□□□□ -1.41
CASC4-207ENST00000559037 NCKAP1LP55160 1127 aa6.25□□□□□ -1.41
CASC4-207ENST00000559037 GABREP78334 506 aa6.25□□□□□ -1.41
CASC4-207ENST00000559037 HTRA3P83110 453 aa6.25□□□□□ -1.41
CASC4-207ENST00000559037 CXCL9Q07325 125 aa6.25□□□□□ -1.41
CASC4-207ENST00000559037 KIAA2012Q0VF49 1180 aa6.25□□□□□ -1.41
CASC4-207ENST00000559037 NTRK3Q16288 839 aa6.25□□□□□ -1.41
CASC4-207ENST00000559037 STEAP3Q658P3 488 aa6.25□□□□□ -1.41
CASC4-207ENST00000559037 MILR1Q7Z6M3 343 aa6.25□□□□□ -1.41
CASC4-207ENST00000559037 TRIM48Q8IWZ4 208 aa6.25□□□□□ -1.41
CASC4-207ENST00000559037 LINC01356Q8N9X3 169 aa6.25□□□□□ -1.41
CASC4-207ENST00000559037 SUPT20HQ8NEM7 779 aa6.25□□□□□ -1.41
CASC4-207ENST00000559037 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.25□□□□□ -1.41
CASC4-207ENST00000559037 STK31Q9BXU1 1019 aa6.25□□□□□ -1.41
CASC4-207ENST00000559037 TMX4Q9H1E5 349 aaPredicted RBP6.25□□□□□ -1.41
CASC4-207ENST00000559037 CDIP1Q9H305 208 aa6.25□□□□□ -1.41
CASC4-207ENST00000559037 SMOC1Q9H4F8 434 aa6.25□□□□□ -1.41
CASC4-207ENST00000559037 CWC25Q9NXE8 425 aaPredicted RBP6.25□□□□□ -1.41
CASC4-207ENST00000559037 PFDN2Q9UHV9 154 aa6.25□□□□□ -1.41
CASC4-207ENST00000559037 HACL1Q9UJ83 578 aa6.25□□□□□ -1.41
CASC4-207ENST00000559037 FBXL7Q9UJT9 491 aa6.25□□□□□ -1.41
CASC4-207ENST00000559037 PMF1-BGLAPU3KQ54 211 aa6.25□□□□□ -1.41
CASC4-207ENST00000559037 ZNF521Q96K83 1311 aa6.25□□□□□ -1.41
CASC4-207ENST00000559037 PASKQ96RG2 1323 aa6.25□□□□□ -1.41
CASC4-207ENST00000559037 CDHR2Q9BYE9 1310 aa6.25□□□□□ -1.41
CASC4-207ENST00000559037 PPIP5K2O43314 1243 aa6.24□□□□□ -1.41
CASC4-207ENST00000559037 PDE8AO60658 829 aa6.24□□□□□ -1.41
CASC4-207ENST00000559037 TADA3O75528 432 aa6.24□□□□□ -1.41
CASC4-207ENST00000559037 ATF2P15336 505 aa6.24□□□□□ -1.41
CASC4-207ENST00000559037 EPHX2P34913 555 aa6.24□□□□□ -1.41
CASC4-207ENST00000559037 SPIRE1Q08AE8 756 aa6.24□□□□□ -1.41
CASC4-207ENST00000559037 FBLN7Q53RD9 439 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms