RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 NOSTRINQ8IVI9 506 aa18.97■□□□□ 0.63
LRRC28-210ENST00000558879 THNSL1Q8IYQ7 743 aa18.97■□□□□ 0.63
LRRC28-210ENST00000558879 EFHBQ8N7U6 833 aa18.97■□□□□ 0.63
LRRC28-210ENST00000558879 RNF169Q8NCN4 708 aa18.97■□□□□ 0.63
LRRC28-210ENST00000558879 MRPL9Q9BYD2 267 aaKnown RBP18.97■□□□□ 0.63
LRRC28-210ENST00000558879 CD320Q9NPF0 282 aa18.97■□□□□ 0.63
LRRC28-210ENST00000558879 GLP2RO95838 553 aa18.96■□□□□ 0.63
LRRC28-210ENST00000558879 OR52Z1P0C646 297 aa18.96■□□□□ 0.63
LRRC28-210ENST00000558879 SPATA31C1P0DKV0 1188 aa18.96■□□□□ 0.63
LRRC28-210ENST00000558879 PPM1AP35813 382 aa18.96■□□□□ 0.63
LRRC28-210ENST00000558879 TRAPPC10P48553 1259 aa18.96■□□□□ 0.63
LRRC28-210ENST00000558879 PDE12Q6L8Q7 609 aaKnown RBP18.96■□□□□ 0.63
LRRC28-210ENST00000558879 FAM184AQ8NB25 1140 aa18.96■□□□□ 0.63
LRRC28-210ENST00000558879 RNF149Q8NC42 400 aa18.96■□□□□ 0.63
LRRC28-210ENST00000558879 MRPS27Q92552 414 aaKnown RBP18.96■□□□□ 0.63
LRRC28-210ENST00000558879 MSLNLQ96KJ4 702 aa18.96■□□□□ 0.63
LRRC28-210ENST00000558879 ZNF558Q96NG5 402 aa18.96■□□□□ 0.63
LRRC28-210ENST00000558879 TUFT1Q9NNX1 390 aa18.96■□□□□ 0.63
LRRC28-210ENST00000558879 MEIS3P2A8K0S8 358 aa18.95■□□□□ 0.62
LRRC28-210ENST00000558879 SRGAP2CP0DJJ0 459 aa18.95■□□□□ 0.62
LRRC28-210ENST00000558879 U2AF2P26368 475 aaKnown RBP eCLIP18.95■□□□□ 0.621e-8■■■■■ 33
LRRC28-210ENST00000558879 HOXA11P31270 313 aaPredicted RBP18.95■□□□□ 0.62
LRRC28-210ENST00000558879 PBX3P40426 434 aa18.95■□□□□ 0.62
LRRC28-210ENST00000558879 ERVFC1P60507 584 aa18.95■□□□□ 0.62
LRRC28-210ENST00000558879 POU5F1BQ06416 359 aa18.95■□□□□ 0.62
LRRC28-210ENST00000558879 CAPSQ13938 189 aa18.95■□□□□ 0.62
LRRC28-210ENST00000558879 MXD4Q14582 209 aaPredicted RBP18.95■□□□□ 0.62
LRRC28-210ENST00000558879 TTC38Q5R3I4 469 aa18.95■□□□□ 0.62
LRRC28-210ENST00000558879 EP400NLQ6ZTU2 488 aa18.95■□□□□ 0.62
LRRC28-210ENST00000558879 SLC39A11Q8N1S5 342 aa18.95■□□□□ 0.62
LRRC28-210ENST00000558879 LPPQ93052 612 aa18.95■□□□□ 0.62
LRRC28-210ENST00000558879 PLXNA3P51805 1871 aa18.94■□□□□ 0.62
LRRC28-210ENST00000558879 MTCL1Q9Y4B5 1905 aaKnown RBP18.94■□□□□ 0.62
LRRC28-210ENST00000558879 C2orf16Q68DN1 1984 aa18.94■□□□□ 0.62
LRRC28-210ENST00000558879 MBTPS2O43462 519 aa18.94■□□□□ 0.62
LRRC28-210ENST00000558879 MED24O75448 989 aa18.94■□□□□ 0.62
LRRC28-210ENST00000558879 XRCC6P12956 609 aaKnown RBP eCLIP18.94■□□□□ 0.62
LRRC28-210ENST00000558879 ATP2B1P20020 1258 aa18.94■□□□□ 0.62
LRRC28-210ENST00000558879 NRIP1P48552 1158 aa18.94■□□□□ 0.62
LRRC28-210ENST00000558879 PTENP60484 403 aa18.94■□□□□ 0.62
LRRC28-210ENST00000558879 PCBP1Q15365 356 aaKnown RBP eCLIP18.94■□□□□ 0.62
LRRC28-210ENST00000558879 UBXN11Q5T124 520 aa18.94■□□□□ 0.62
LRRC28-210ENST00000558879 CATSPER3Q86XQ3 398 aa18.94■□□□□ 0.62
LRRC28-210ENST00000558879 ASAP3Q8TDY4 903 aa18.94■□□□□ 0.62
LRRC28-210ENST00000558879 PIGOQ8TEQ8 1089 aa18.94■□□□□ 0.62
LRRC28-210ENST00000558879 KHSRPQ92945 711 aaKnown RBP eCLIP18.94■□□□□ 0.62
LRRC28-210ENST00000558879 POLR3CQ9BUI4 534 aaPredicted RBP18.94■□□□□ 0.62
LRRC28-210ENST00000558879 NFKBIZQ9BYH8 718 aa18.94■□□□□ 0.62
LRRC28-210ENST00000558879 IGFLR1Q9H665 355 aa18.94■□□□□ 0.62
LRRC28-210ENST00000558879 CLEC1BQ9P126 229 aa18.94■□□□□ 0.62
LRRC28-210ENST00000558879 PRKAG3Q9UGI9 489 aa18.94■□□□□ 0.62
LRRC28-210ENST00000558879 PDCD11Q14690 1871 aaKnown RBP18.94■□□□□ 0.62
LRRC28-210ENST00000558879 MYH15Q9Y2K3 1946 aa18.94■□□□□ 0.62
LRRC28-210ENST00000558879 FSD2A1L4K1 749 aa18.93■□□□□ 0.62
LRRC28-210ENST00000558879 CD2BP2O95400 341 aaKnown RBP18.93■□□□□ 0.62
LRRC28-210ENST00000558879 ARL2P36404 184 aa18.93■□□□□ 0.62
LRRC28-210ENST00000558879 SMAD4Q13485 552 aaKnown RBP18.93■□□□□ 0.62
LRRC28-210ENST00000558879 KCNC3Q14003 757 aa18.93■□□□□ 0.62
LRRC28-210ENST00000558879 ZNF174Q15697 407 aa18.93■□□□□ 0.62
LRRC28-210ENST00000558879 SMAD2Q15796 467 aaKnown RBP18.93■□□□□ 0.62
LRRC28-210ENST00000558879 DUSP6Q16828 381 aa18.93■□□□□ 0.62
LRRC28-210ENST00000558879 AGMOQ6ZNB7 445 aa18.93■□□□□ 0.62
LRRC28-210ENST00000558879 MRPL10Q7Z7H8 261 aaKnown RBP18.93■□□□□ 0.62
LRRC28-210ENST00000558879 C4orf32Q8N8J7 132 aa18.93■□□□□ 0.62
LRRC28-210ENST00000558879 CDCA3Q99618 268 aaPredicted RBP18.93■□□□□ 0.62
LRRC28-210ENST00000558879 CD207Q9UJ71 328 aa18.93■□□□□ 0.62
LRRC28-210ENST00000558879 DBR1Q9UK59 544 aaKnown RBP18.93■□□□□ 0.62
LRRC28-210ENST00000558879 FAM50BQ9Y247 325 aa18.93■□□□□ 0.62
LRRC28-210ENST00000558879 CITO14578 2027 aa18.93■□□□□ 0.62
LRRC28-210ENST00000558879 ST18O60284 1047 aa18.92■□□□□ 0.62
LRRC28-210ENST00000558879 TSPAN1O60635 241 aa18.92■□□□□ 0.62
LRRC28-210ENST00000558879 USO1O60763 962 aaKnown RBP18.92■□□□□ 0.62
LRRC28-210ENST00000558879 OFD1O75665 1012 aa18.92■□□□□ 0.62
LRRC28-210ENST00000558879 EYA4O95677 639 aa18.92■□□□□ 0.62
LRRC28-210ENST00000558879 GLRA2P23416 452 aa18.92■□□□□ 0.62
LRRC28-210ENST00000558879 RPA1P27694 616 aa18.92■□□□□ 0.62
LRRC28-210ENST00000558879 TECP42680 631 aa18.92■□□□□ 0.62
LRRC28-210ENST00000558879 NDUFV1P49821 464 aa18.92■□□□□ 0.62
LRRC28-210ENST00000558879 FXR2P51116 673 aaKnown RBP eCLIP18.92■□□□□ 0.62
LRRC28-210ENST00000558879 ZP2Q05996 745 aa18.92■□□□□ 0.62
LRRC28-210ENST00000558879 MBTD1Q05BQ5 628 aa18.92■□□□□ 0.62
LRRC28-210ENST00000558879 COASYQ13057 564 aa18.92■□□□□ 0.62
LRRC28-210ENST00000558879 TFDP1Q14186 410 aa18.92■□□□□ 0.62
LRRC28-210ENST00000558879 NBR1Q14596 966 aa18.92■□□□□ 0.62
LRRC28-210ENST00000558879 AMHR2Q16671 573 aa18.92■□□□□ 0.62
LRRC28-210ENST00000558879 POTEGQ6S5H5 508 aa18.92■□□□□ 0.62
LRRC28-210ENST00000558879 GLB1LQ6UWU2 654 aa18.92■□□□□ 0.62
LRRC28-210ENST00000558879 SMRP1Q8NCR6 262 aa18.92■□□□□ 0.62
LRRC28-210ENST00000558879 VN1R2Q8NFZ6 395 aa18.92■□□□□ 0.62
LRRC28-210ENST00000558879 PGBD4Q96DM1 585 aa18.92■□□□□ 0.62
LRRC28-210ENST00000558879 TCF25Q9BQ70 676 aa18.92■□□□□ 0.62
LRRC28-210ENST00000558879 TBC1D13Q9NVG8 400 aa18.92■□□□□ 0.62
LRRC28-210ENST00000558879 SPG21Q9NZD8 308 aa18.92■□□□□ 0.62
LRRC28-210ENST00000558879 NOL7Q9UMY1 257 aaKnown RBP18.92■□□□□ 0.62
LRRC28-210ENST00000558879 PCDHB2Q9Y5E7 798 aa18.92■□□□□ 0.62
LRRC28-210ENST00000558879 CNTNAP2Q9UHC6 1331 aa18.92■□□□□ 0.62
LRRC28-210ENST00000558879 CARNS1A5YM72 827 aa18.91■□□□□ 0.62
LRRC28-210ENST00000558879 C19orf67A6NJJ6 358 aa18.91■□□□□ 0.62
LRRC28-210ENST00000558879 ERLIN2O94905 339 aa18.91■□□□□ 0.62
LRRC28-210ENST00000558879 MUTP22033 750 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms