RNA–Protein interactions for RNA: ENST00000557678.1

GPHN-216, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-216ENST00000557678 POFUT1Q9H488 388 aa4.21□□□□□ -1.74
GPHN-216ENST00000557678 B4GALT6Q9UBX8 382 aa4.21□□□□□ -1.74
GPHN-216ENST00000557678 SORCS3Q9UPU3 1222 aa4.21□□□□□ -1.74
GPHN-216ENST00000557678 POLR2AP24928 1970 aaKnown RBP4.2□□□□□ -1.74
GPHN-216ENST00000557678 PPP1R12AO14974 1030 aaPredicted RBP4.2□□□□□ -1.74
GPHN-216ENST00000557678 GAS7O60861 476 aa4.2□□□□□ -1.74
GPHN-216ENST00000557678 STC2O76061 302 aa4.2□□□□□ -1.74
GPHN-216ENST00000557678 PCDH8O95206 1070 aa4.2□□□□□ -1.74
GPHN-216ENST00000557678 ASMTLO95671 621 aa4.2□□□□□ -1.74
GPHN-216ENST00000557678 SDSP20132 328 aa4.2□□□□□ -1.74
GPHN-216ENST00000557678 ADAM8P78325 824 aa4.2□□□□□ -1.74
GPHN-216ENST00000557678 SPIDRQ14159 915 aa4.2□□□□□ -1.74
GPHN-216ENST00000557678 KIAA1841Q6NSI8 718 aa4.2□□□□□ -1.74
GPHN-216ENST00000557678 OR5M3Q8NGP4 307 aa4.2□□□□□ -1.74
GPHN-216ENST00000557678 CPT1CQ8TCG5 803 aa4.2□□□□□ -1.74
GPHN-216ENST00000557678 ST8SIA2Q92186 375 aa4.2□□□□□ -1.74
GPHN-216ENST00000557678 FERMT2Q96AC1 680 aa4.2□□□□□ -1.74
GPHN-216ENST00000557678 AGAP2Q99490 1192 aa4.2□□□□□ -1.74
GPHN-216ENST00000557678 CPPED1Q9BRF8 314 aaPredicted RBP4.2□□□□□ -1.74
GPHN-216ENST00000557678 OXSMQ9NWU1 459 aa4.2□□□□□ -1.74
GPHN-216ENST00000557678 GPRC5BQ9NZH0 403 aa4.2□□□□□ -1.74
GPHN-216ENST00000557678 HDAC5Q9UQL6 1122 aa4.2□□□□□ -1.74
GPHN-216ENST00000557678 ST20-MTHFSA0A0A6YYL1 179 aa4.19□□□□□ -1.74
GPHN-216ENST00000557678 CBX4O00257 560 aa4.19□□□□□ -1.74
GPHN-216ENST00000557678 RECQL4O94761 1208 aa4.19□□□□□ -1.74
GPHN-216ENST00000557678 SCAF4O95104 1147 aaKnown RBP4.19□□□□□ -1.74
GPHN-216ENST00000557678 BMP5P22003 454 aa4.19□□□□□ -1.74
GPHN-216ENST00000557678 RABGGTBP53611 331 aa4.19□□□□□ -1.74
GPHN-216ENST00000557678 SQSTM1Q13501 440 aa4.19□□□□□ -1.74
GPHN-216ENST00000557678 PTPAQ15257 358 aa4.19□□□□□ -1.74
GPHN-216ENST00000557678 C21orf62-AS1Q17RA5 79 aa4.19□□□□□ -1.74
GPHN-216ENST00000557678 FAM214AQ32MH5 1076 aa4.19□□□□□ -1.74
GPHN-216ENST00000557678 ESRP1Q6NXG1 681 aaKnown RBP4.19□□□□□ -1.74
GPHN-216ENST00000557678 KCNV1Q6PIU1 500 aa4.19□□□□□ -1.74
GPHN-216ENST00000557678 PASD1Q8IV76 773 aa4.19□□□□□ -1.74
GPHN-216ENST00000557678 ZZZ3Q8IYH5 903 aa4.19□□□□□ -1.74
GPHN-216ENST00000557678 ULK2Q8IYT8 1036 aa4.19□□□□□ -1.74
GPHN-216ENST00000557678 MDGA1Q8NFP4 955 aa4.19□□□□□ -1.74
GPHN-216ENST00000557678 SH3TC2Q8TF17 1288 aa4.19□□□□□ -1.74
GPHN-216ENST00000557678 ZSWIM4Q9H7M6 989 aa4.19□□□□□ -1.74
GPHN-216ENST00000557678 ING3Q9NXR8 418 aa4.19□□□□□ -1.74
GPHN-216ENST00000557678 H2AFY2Q9P0M6 372 aaPredicted RBP4.19□□□□□ -1.74
GPHN-216ENST00000557678 EIF2B4Q9UI10 523 aaKnown RBP4.19□□□□□ -1.74
GPHN-216ENST00000557678 USP18Q9UMW8 372 aa4.19□□□□□ -1.74
GPHN-216ENST00000557678 SPO11Q9Y5K1 396 aa4.19□□□□□ -1.74
GPHN-216ENST00000557678 A0A0A6YYJ9 748 aa4.18□□□□□ -1.74
GPHN-216ENST00000557678 KLRG2A4D1S0 409 aaPredicted RBP4.18□□□□□ -1.74
GPHN-216ENST00000557678 NRP1O14786 923 aa4.18□□□□□ -1.74
GPHN-216ENST00000557678 FOXN1O15353 648 aa4.18□□□□□ -1.74
GPHN-216ENST00000557678 KPNA6O60684 536 aa4.18□□□□□ -1.74
GPHN-216ENST00000557678 OPHN1O60890 802 aa4.18□□□□□ -1.74
GPHN-216ENST00000557678 ALDH1A2O94788 518 aa4.18□□□□□ -1.74
GPHN-216ENST00000557678 ABHD16AO95870 558 aa4.18□□□□□ -1.74
GPHN-216ENST00000557678 XPAP23025 273 aaPredicted RBP4.18□□□□□ -1.74
GPHN-216ENST00000557678 CD40P25942 277 aa4.18□□□□□ -1.74
GPHN-216ENST00000557678 PABPC4Q13310 644 aaKnown RBP eCLIP4.18□□□□□ -1.74
GPHN-216ENST00000557678 SART3Q15020 963 aaKnown RBP4.18□□□□□ -1.74
GPHN-216ENST00000557678 KRTAP15-1Q3LI76 137 aa4.18□□□□□ -1.74
GPHN-216ENST00000557678 LY6G5CQ5SRR4 150 aa4.18□□□□□ -1.74
GPHN-216ENST00000557678 CNNM4Q6P4Q7 775 aa4.18□□□□□ -1.74
GPHN-216ENST00000557678 UNQ6494/PRO21346Q6UXR6 183 aa4.18□□□□□ -1.74
GPHN-216ENST00000557678 RPUSD2Q8IZ73 545 aaKnown RBP4.18□□□□□ -1.74
GPHN-216ENST00000557678 PROKR1Q8TCW9 393 aa4.18□□□□□ -1.74
GPHN-216ENST00000557678 THG1LQ9NWX6 298 aaKnown RBP4.18□□□□□ -1.74
GPHN-216ENST00000557678 ATP2A2P16615 1042 aaKnown RBP4.17□□□□□ -1.74
GPHN-216ENST00000557678 CASRP41180 1078 aa4.17□□□□□ -1.74
GPHN-216ENST00000557678 TIGD2Q4W5G0 525 aa4.17□□□□□ -1.74
GPHN-216ENST00000557678 DPY19L2P1Q6NXN4 242 aa4.17□□□□□ -1.74
GPHN-216ENST00000557678 APBB1IPQ7Z5R6 666 aaPredicted RBP4.17□□□□□ -1.74
GPHN-216ENST00000557678 MRGPREQ86SM8 312 aa4.17□□□□□ -1.74
GPHN-216ENST00000557678 VRK3Q8IV63 474 aa4.17□□□□□ -1.74
GPHN-216ENST00000557678 NXPE1Q8N323 547 aa4.17□□□□□ -1.74
GPHN-216ENST00000557678 OSBPL6Q9BZF3 934 aa4.17□□□□□ -1.74
GPHN-216ENST00000557678 PITHD1Q9GZP4 211 aaPredicted RBP4.17□□□□□ -1.74
GPHN-216ENST00000557678 KANSL2Q9H9L4 492 aa4.17□□□□□ -1.74
GPHN-216ENST00000557678 MAGEC2Q9UBF1 373 aaPredicted RBP4.17□□□□□ -1.74
GPHN-216ENST00000557678 PCDHB6Q9Y5E3 794 aa4.17□□□□□ -1.74
GPHN-216ENST00000557678 MYPNQ86TC9 1320 aa4.17□□□□□ -1.74
GPHN-216ENST00000557678 A0A0A6YYK5 440 aaPredicted RBP4.16□□□□□ -1.74
GPHN-216ENST00000557678 HOXA3O43365 443 aaPredicted RBP4.16□□□□□ -1.74
GPHN-216ENST00000557678 NUDT3O95989 172 aa4.16□□□□□ -1.74
GPHN-216ENST00000557678 GCP02774 474 aa4.16□□□□□ -1.74
GPHN-216ENST00000557678 GYPEP15421 78 aa4.16□□□□□ -1.74
GPHN-216ENST00000557678 KRT4P19013 534 aa4.16□□□□□ -1.74
GPHN-216ENST00000557678 KPNA1P52294 538 aaPredicted RBP4.16□□□□□ -1.74
GPHN-216ENST00000557678 MBNL2Q5VZF2 373 aaKnown RBP4.16□□□□□ -1.74
GPHN-216ENST00000557678 ESPNLQ6ZVH7 1005 aa4.16□□□□□ -1.74
GPHN-216ENST00000557678 KANSL1Q7Z3B3 1105 aa4.16□□□□□ -1.74
GPHN-216ENST00000557678 ZNF575Q86XF7 245 aa4.16□□□□□ -1.74
GPHN-216ENST00000557678 CHTF18Q8WVB6 975 aa4.16□□□□□ -1.74
GPHN-216ENST00000557678 SREK1Q8WXA9 508 aaKnown RBP4.16□□□□□ -1.74
GPHN-216ENST00000557678 SOX7Q9BT81 388 aa4.16□□□□□ -1.74
GPHN-216ENST00000557678 MLST8Q9BVC4 326 aa4.16□□□□□ -1.74
GPHN-216ENST00000557678 HAPLN2Q9GZV7 340 aa4.16□□□□□ -1.74
GPHN-216ENST00000557678 TRPS1Q9UHF7 1281 aa4.16□□□□□ -1.74
GPHN-216ENST00000557678 MSRAQ9UJ68 235 aa4.16□□□□□ -1.74
GPHN-216ENST00000557678 ZNF891A8MT65 544 aaPredicted RBP4.15□□□□□ -1.75
GPHN-216ENST00000557678 MTSS1O43312 755 aa4.15□□□□□ -1.75
GPHN-216ENST00000557678 DNAJC6O75061 913 aa4.15□□□□□ -1.75
GPHN-216ENST00000557678 PPFIA4O75335 1185 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms