RNA–Protein interactions for RNA: ENST00000557517.1

PSMC6-215, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 3

Gene PSMC6, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-215ENST00000557517 OTUD6AQ7L8S5 288 aa11.85□□□□□ -0.51
PSMC6-215ENST00000557517 PRPF31Q8WWY3 499 aaKnown RBP11.85□□□□□ -0.51
PSMC6-215ENST00000557517 NLRP7Q8WX94 980 aa11.85□□□□□ -0.51
PSMC6-215ENST00000557517 SLC7A3Q8WY07 619 aa11.85□□□□□ -0.51
PSMC6-215ENST00000557517 KIF2CQ99661 725 aa11.85□□□□□ -0.51
PSMC6-215ENST00000557517 FDXACB1Q9BRP7 624 aaPredicted RBP11.85□□□□□ -0.51
PSMC6-215ENST00000557517 LLPHQ9BRT6 129 aaKnown RBP11.85□□□□□ -0.51
PSMC6-215ENST00000557517 BRMS1Q9HCU9 246 aa11.85□□□□□ -0.51
PSMC6-215ENST00000557517 CLDND1Q9NY35 253 aa11.85□□□□□ -0.51
PSMC6-215ENST00000557517 DACT1Q9NYF0 836 aa11.85□□□□□ -0.51
PSMC6-215ENST00000557517 SPTBN4Q9H254 2564 aa11.84□□□□□ -0.51
PSMC6-215ENST00000557517 ZBTB39O15060 712 aa11.84□□□□□ -0.51
PSMC6-215ENST00000557517 MARCH6O60337 910 aa11.84□□□□□ -0.51
PSMC6-215ENST00000557517 XRCC6P12956 609 aaKnown RBP eCLIP11.84□□□□□ -0.51
PSMC6-215ENST00000557517 ALADP13716 330 aa11.84□□□□□ -0.51
PSMC6-215ENST00000557517 IL9P15248 144 aa11.84□□□□□ -0.51
PSMC6-215ENST00000557517 ATF7P17544 494 aaPredicted RBP11.84□□□□□ -0.51
PSMC6-215ENST00000557517 FGFR4P22455 802 aa11.84□□□□□ -0.51
PSMC6-215ENST00000557517 GTF2F1P35269 517 aaKnown RBP eCLIP11.84□□□□□ -0.51
PSMC6-215ENST00000557517 RFC5P40937 340 aa11.84□□□□□ -0.51
PSMC6-215ENST00000557517 PDE12Q6L8Q7 609 aaKnown RBP11.84□□□□□ -0.51
PSMC6-215ENST00000557517 EP400NLQ6ZTU2 488 aa11.84□□□□□ -0.51
PSMC6-215ENST00000557517 RHPN2Q8IUC4 686 aa11.84□□□□□ -0.51
PSMC6-215ENST00000557517 KSR1Q8IVT5 923 aa11.84□□□□□ -0.51
PSMC6-215ENST00000557517 DIS3L2Q8IYB7 885 aaKnown RBP11.84□□□□□ -0.51
PSMC6-215ENST00000557517 RSPH1Q8WYR4 309 aa11.84□□□□□ -0.51
PSMC6-215ENST00000557517 CEP170P1Q96L14 293 aa11.84□□□□□ -0.51
PSMC6-215ENST00000557517 LZTS1Q9Y250 596 aa11.84□□□□□ -0.51
PSMC6-215ENST00000557517 TTC3P53804 2025 aa11.83□□□□□ -0.52
PSMC6-215ENST00000557517 MICAL3Q7RTP6 2002 aa11.83□□□□□ -0.52
PSMC6-215ENST00000557517 WDFY4Q6ZS81 3184 aa11.83□□□□□ -0.52
PSMC6-215ENST00000557517 WNT7AO00755 349 aa11.83□□□□□ -0.52
PSMC6-215ENST00000557517 FSCN2O14926 492 aa11.83□□□□□ -0.52
PSMC6-215ENST00000557517 ASAP2O43150 1006 aa11.83□□□□□ -0.52
PSMC6-215ENST00000557517 GAS2O43903 313 aaKnown RBP11.83□□□□□ -0.52
PSMC6-215ENST00000557517 PPP1R37O75864 691 aa11.83□□□□□ -0.52
PSMC6-215ENST00000557517 EYA4O95677 639 aa11.83□□□□□ -0.52
PSMC6-215ENST00000557517 LAG3P18627 525 aa11.83□□□□□ -0.52
PSMC6-215ENST00000557517 SFPQP23246 707 aaKnown RBP eCLIP11.83□□□□□ -0.52
PSMC6-215ENST00000557517 HOXA11P31270 313 aaPredicted RBP11.83□□□□□ -0.52
PSMC6-215ENST00000557517 PHKA2P46019 1235 aa11.83□□□□□ -0.52
PSMC6-215ENST00000557517 ERVFC1P60507 584 aa11.83□□□□□ -0.52
PSMC6-215ENST00000557517 POU5F1BQ06416 359 aa11.83□□□□□ -0.52
PSMC6-215ENST00000557517 TRIM29Q14134 588 aa11.83□□□□□ -0.52
PSMC6-215ENST00000557517 SMAD2Q15796 467 aaKnown RBP11.83□□□□□ -0.52
PSMC6-215ENST00000557517 CLLU1OSQ5K130 101 aa11.83□□□□□ -0.52
PSMC6-215ENST00000557517 PLA2G4FQ68DD2 849 aa11.83□□□□□ -0.52
PSMC6-215ENST00000557517 KCNT2Q6UVM3 1135 aa11.83□□□□□ -0.52
PSMC6-215ENST00000557517 SRGAP1Q7Z6B7 1085 aa11.83□□□□□ -0.52
PSMC6-215ENST00000557517 ADGRD2Q7Z7M1 963 aa11.83□□□□□ -0.52
PSMC6-215ENST00000557517 TPH2Q8IWU9 490 aa11.83□□□□□ -0.52
PSMC6-215ENST00000557517 EFHBQ8N7U6 833 aa11.83□□□□□ -0.52
PSMC6-215ENST00000557517 COLGALT1Q8NBJ5 622 aa11.83□□□□□ -0.52
PSMC6-215ENST00000557517 PPP2R3CQ969Q6 453 aa11.83□□□□□ -0.52
PSMC6-215ENST00000557517 DYDC2Q96IM9 177 aa11.83□□□□□ -0.52
PSMC6-215ENST00000557517 MSLNLQ96KJ4 702 aa11.83□□□□□ -0.52
PSMC6-215ENST00000557517 FBXL18Q96ME1 805 aa11.83□□□□□ -0.52
PSMC6-215ENST00000557517 SCLT1Q96NL6 688 aa11.83□□□□□ -0.52
PSMC6-215ENST00000557517 EIF2AK1Q9BQI3 630 aaKnown RBP11.83□□□□□ -0.52
PSMC6-215ENST00000557517 LXNQ9BS40 222 aa11.83□□□□□ -0.52
PSMC6-215ENST00000557517 IGFLR1Q9H665 355 aa11.83□□□□□ -0.52
PSMC6-215ENST00000557517 TTC12Q9H892 705 aaPredicted RBP11.83□□□□□ -0.52
PSMC6-215ENST00000557517 CLEC1BQ9P126 229 aa11.83□□□□□ -0.52
PSMC6-215ENST00000557517 HCSTQ9UBK5 93 aa11.83□□□□□ -0.52
PSMC6-215ENST00000557517 PRKAG3Q9UGI9 489 aa11.83□□□□□ -0.52
PSMC6-215ENST00000557517 FAM50BQ9Y247 325 aa11.83□□□□□ -0.52
PSMC6-215ENST00000557517 COL4A3BPQ9Y5P4 624 aa11.83□□□□□ -0.52
PSMC6-215ENST00000557517 TECTAO75443 2155 aa11.83□□□□□ -0.52
PSMC6-215ENST00000557517 LINC01565O15544 149 aa11.82□□□□□ -0.52
PSMC6-215ENST00000557517 SKIP12755 728 aa11.82□□□□□ -0.52
PSMC6-215ENST00000557517 IBSPP21815 317 aaPredicted RBP11.82□□□□□ -0.52
PSMC6-215ENST00000557517 POLGP54098 1239 aaPredicted RBP11.82□□□□□ -0.52
PSMC6-215ENST00000557517 KCNC3Q14003 757 aa11.82□□□□□ -0.52
PSMC6-215ENST00000557517 CTTNQ14247 550 aaKnown RBP11.82□□□□□ -0.52
PSMC6-215ENST00000557517 CALCRLQ16602 461 aa11.82□□□□□ -0.52
PSMC6-215ENST00000557517 C8orf34Q49A92 452 aa11.82□□□□□ -0.52
PSMC6-215ENST00000557517 SPOUT1Q5T280 376 aaKnown RBP11.82□□□□□ -0.52
PSMC6-215ENST00000557517 NCAPH2Q6IBW4 605 aa11.82□□□□□ -0.52
PSMC6-215ENST00000557517 TMEM184AQ6ZMB5 413 aa11.82□□□□□ -0.52
PSMC6-215ENST00000557517 FERMT3Q86UX7 667 aa11.82□□□□□ -0.52
PSMC6-215ENST00000557517 ABI1Q8IZP0 508 aa11.82□□□□□ -0.52
PSMC6-215ENST00000557517 FBXO18Q8NFZ0 1043 aa11.82□□□□□ -0.52
PSMC6-215ENST00000557517 MICAL1Q8TDZ2 1067 aa11.82□□□□□ -0.52
PSMC6-215ENST00000557517 TCP11Q8WWU5 503 aa11.82□□□□□ -0.52
PSMC6-215ENST00000557517 PSPC1Q8WXF1 523 aaKnown RBP11.82□□□□□ -0.52
PSMC6-215ENST00000557517 MRPS27Q92552 414 aaKnown RBP11.82□□□□□ -0.52
PSMC6-215ENST00000557517 TMEM143Q96AN5 459 aa11.82□□□□□ -0.52
PSMC6-215ENST00000557517 ZSCAN31Q96LW9 406 aaPredicted RBP11.82□□□□□ -0.52
PSMC6-215ENST00000557517 TLR9Q9NR96 1032 aa11.82□□□□□ -0.52
PSMC6-215ENST00000557517 ANKEF1Q9NU02 776 aa11.82□□□□□ -0.52
PSMC6-215ENST00000557517 PUF60Q9UHX1 559 aaKnown RBP11.82□□□□□ -0.52
PSMC6-215ENST00000557517 TRIOO75962 3097 aa11.81□□□□□ -0.52
PSMC6-215ENST00000557517 CACNA1AO00555 2505 aa11.81□□□□□ -0.52
PSMC6-215ENST00000557517 MBTPS2O43462 519 aa11.81□□□□□ -0.52
PSMC6-215ENST00000557517 DCXO43602 365 aa11.81□□□□□ -0.52
PSMC6-215ENST00000557517 NEMFO60524 1076 aa11.81□□□□□ -0.52
PSMC6-215ENST00000557517 TBX10O75333 385 aa11.81□□□□□ -0.52
PSMC6-215ENST00000557517 OFD1O75665 1012 aa11.81□□□□□ -0.52
PSMC6-215ENST00000557517 SRGAP2CP0DJJ0 459 aa11.81□□□□□ -0.52
PSMC6-215ENST00000557517 PPM1AP35813 382 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms