RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 RAI14Q9P0K7 980 aa5.74□□□□□ -1.49
SCFD1-223ENST00000557076 HMG20BQ9P0W2 317 aa5.74□□□□□ -1.49
SCFD1-223ENST00000557076 ROBO3Q96MS0 1386 aa5.74□□□□□ -1.49
SCFD1-223ENST00000557076 LOC285556D6RIA3 1793 aa5.74□□□□□ -1.49
SCFD1-223ENST00000557076 DOCK1Q14185 1865 aa5.74□□□□□ -1.49
SCFD1-223ENST00000557076 ZNF318Q5VUA4 2279 aa5.74□□□□□ -1.49
SCFD1-223ENST00000557076 SYNRGQ9UMZ2 1314 aa5.74□□□□□ -1.49
SCFD1-223ENST00000557076 VPS13AQ96RL7 3174 aa5.73□□□□□ -1.49
SCFD1-223ENST00000557076 PLXNA1Q9UIW2 1896 aa5.73□□□□□ -1.49
SCFD1-223ENST00000557076 MYADML2A6NDP7 307 aa5.73□□□□□ -1.49
SCFD1-223ENST00000557076 PGK2P07205 417 aa5.73□□□□□ -1.49
SCFD1-223ENST00000557076 C6orf222P0C671 652 aaPredicted RBP5.73□□□□□ -1.49
SCFD1-223ENST00000557076 USP17L7P0C7H9 530 aa5.73□□□□□ -1.49
SCFD1-223ENST00000557076 GUCY1A2P33402 732 aa5.73□□□□□ -1.49
SCFD1-223ENST00000557076 CCL23P55773 120 aa5.73□□□□□ -1.49
SCFD1-223ENST00000557076 PLS1Q14651 629 aa5.73□□□□□ -1.49
SCFD1-223ENST00000557076 KCTD2Q14681 263 aa5.73□□□□□ -1.49
SCFD1-223ENST00000557076 ABCB5Q2M3G0 1257 aa5.73□□□□□ -1.49
SCFD1-223ENST00000557076 WIPI1Q5MNZ9 446 aaPredicted RBP5.73□□□□□ -1.49
SCFD1-223ENST00000557076 TMPRSS7Q7RTY8 843 aa5.73□□□□□ -1.49
SCFD1-223ENST00000557076 RIOX2Q8IUF8 465 aa5.73□□□□□ -1.49
SCFD1-223ENST00000557076 MAPKAPK5Q8IW41 473 aa5.73□□□□□ -1.49
SCFD1-223ENST00000557076 ASB16Q96NS5 453 aa5.73□□□□□ -1.49
SCFD1-223ENST00000557076 SLC9A7Q96T83 725 aa5.73□□□□□ -1.49
SCFD1-223ENST00000557076 SIL1Q9H173 461 aa5.73□□□□□ -1.49
SCFD1-223ENST00000557076 UBE2ZQ9H832 354 aaPredicted RBP5.73□□□□□ -1.49
SCFD1-223ENST00000557076 CERS4Q9HA82 394 aa5.73□□□□□ -1.49
SCFD1-223ENST00000557076 COPRSQ9NQ92 184 aa5.73□□□□□ -1.49
SCFD1-223ENST00000557076 AATFQ9NY61 560 aaKnown RBP eCLIP5.73□□□□□ -1.49
SCFD1-223ENST00000557076 LRP2BPQ9P2M1 347 aa5.73□□□□□ -1.49
SCFD1-223ENST00000557076 PRKAG3Q9UGI9 489 aa5.73□□□□□ -1.49
SCFD1-223ENST00000557076 SERPINB13Q9UIV8 391 aa5.73□□□□□ -1.49
SCFD1-223ENST00000557076 FLT1P17948 1338 aa5.73□□□□□ -1.49
SCFD1-223ENST00000557076 FANCIQ9NVI1 1328 aa5.73□□□□□ -1.49
SCFD1-223ENST00000557076 A0A1B0GUL6 1792 aa5.72□□□□□ -1.49
SCFD1-223ENST00000557076 EPG5Q9HCE0 2579 aa5.72□□□□□ -1.49
SCFD1-223ENST00000557076 A0A1W2PRG0 241 aa5.72□□□□□ -1.49
SCFD1-223ENST00000557076 CTAGE5O15320 804 aa5.72□□□□□ -1.49
SCFD1-223ENST00000557076 CBX7O95931 251 aa5.72□□□□□ -1.49
SCFD1-223ENST00000557076 C1QTNF9P0C862 333 aa5.72□□□□□ -1.49
SCFD1-223ENST00000557076 ZSCAN22P10073 491 aaPredicted RBP5.72□□□□□ -1.49
SCFD1-223ENST00000557076 ACTN1P12814 892 aa5.72□□□□□ -1.49
SCFD1-223ENST00000557076 KCNA5P22460 613 aa5.72□□□□□ -1.49
SCFD1-223ENST00000557076 COPB2P35606 906 aa5.72□□□□□ -1.49
SCFD1-223ENST00000557076 STAT3P40763 770 aa5.72□□□□□ -1.49
SCFD1-223ENST00000557076 RPS26P62854 115 aaKnown RBP5.72□□□□□ -1.49
SCFD1-223ENST00000557076 PTPN11Q06124 597 aaPredicted RBP5.72□□□□□ -1.49
SCFD1-223ENST00000557076 ITGA7Q13683 1181 aa5.72□□□□□ -1.49
SCFD1-223ENST00000557076 ACVR2BQ13705 512 aa5.72□□□□□ -1.49
SCFD1-223ENST00000557076 TMEM132BQ14DG7 1078 aa5.72□□□□□ -1.49
SCFD1-223ENST00000557076 HERC4Q5GLZ8 1057 aaPredicted RBP5.72□□□□□ -1.49
SCFD1-223ENST00000557076 PRAMEF13Q5VWM6 474 aa5.72□□□□□ -1.49
SCFD1-223ENST00000557076 NAA16Q6N069 864 aaPredicted RBP5.72□□□□□ -1.49
SCFD1-223ENST00000557076 LCNL1Q6ZST4 164 aa5.72□□□□□ -1.49
SCFD1-223ENST00000557076 TTC6Q86TZ1 520 aa5.72□□□□□ -1.49
SCFD1-223ENST00000557076 CERS3Q8IU89 383 aa5.72□□□□□ -1.49
SCFD1-223ENST00000557076 HERC6Q8IVU3 1022 aa5.72□□□□□ -1.49
SCFD1-223ENST00000557076 MAGEB6Q8N7X4 407 aa5.72□□□□□ -1.49
SCFD1-223ENST00000557076 ABHD4Q8TB40 342 aa5.72□□□□□ -1.49
SCFD1-223ENST00000557076 PIWIL2Q8TC59 973 aaKnown RBP5.72□□□□□ -1.49
SCFD1-223ENST00000557076 NEK9Q8TD19 979 aa5.72□□□□□ -1.49
SCFD1-223ENST00000557076 UBE2FQ969M7 185 aa5.72□□□□□ -1.49
SCFD1-223ENST00000557076 DIRC2Q96SL1 478 aa5.72□□□□□ -1.49
SCFD1-223ENST00000557076 TRPV6Q9H1D0 765 aa5.72□□□□□ -1.49
SCFD1-223ENST00000557076 WNT8AQ9H1J5 351 aa5.72□□□□□ -1.49
SCFD1-223ENST00000557076 ABHD16BQ9H3Z7 469 aa5.72□□□□□ -1.49
SCFD1-223ENST00000557076 HDAC5Q9UQL6 1122 aa5.72□□□□□ -1.49
SCFD1-223ENST00000557076 FAM50BQ9Y247 325 aa5.72□□□□□ -1.49
SCFD1-223ENST00000557076 MYH2Q9UKX2 1941 aa5.72□□□□□ -1.49
SCFD1-223ENST00000557076 GRIN2DO15399 1336 aa5.72□□□□□ -1.49
SCFD1-223ENST00000557076 UMODL1Q5DID0 1318 aa5.72□□□□□ -1.49
SCFD1-223ENST00000557076 DNAJC25-GNG10A0A024R161 153 aa5.71□□□□□ -1.5
SCFD1-223ENST00000557076 A0A1B0GUL7 405 aa5.71□□□□□ -1.5
SCFD1-223ENST00000557076 PROB1E7EW31 1015 aa5.71□□□□□ -1.5
SCFD1-223ENST00000557076 B4GALT4O60513 344 aa5.71□□□□□ -1.5
SCFD1-223ENST00000557076 FLOT1O75955 427 aa5.71□□□□□ -1.5
SCFD1-223ENST00000557076 KRT1P04264 644 aa5.71□□□□□ -1.5
SCFD1-223ENST00000557076 TMEM253P0C7T8 217 aa5.71□□□□□ -1.5
SCFD1-223ENST00000557076 SUPT20HL2P0C7V6 817 aa5.71□□□□□ -1.5
SCFD1-223ENST00000557076 IL9P15248 144 aa5.71□□□□□ -1.5
SCFD1-223ENST00000557076 RFC2P35250 354 aa5.71□□□□□ -1.5
SCFD1-223ENST00000557076 TCF15Q12870 199 aa5.71□□□□□ -1.5
SCFD1-223ENST00000557076 SEPT2Q15019 361 aa5.71□□□□□ -1.5
SCFD1-223ENST00000557076 CCDC144BQ3MJ40 725 aa5.71□□□□□ -1.5
SCFD1-223ENST00000557076 KIAA1755Q5JYT7 1200 aa5.71□□□□□ -1.5
SCFD1-223ENST00000557076 TTBK2Q6IQ55 1244 aa5.71□□□□□ -1.5
SCFD1-223ENST00000557076 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.71□□□□□ -1.5
SCFD1-223ENST00000557076 ADHFE1Q8IWW8 467 aa5.71□□□□□ -1.5
SCFD1-223ENST00000557076 PRSS33Q8NF86 280 aa5.71□□□□□ -1.5
SCFD1-223ENST00000557076 RIN3Q8TB24 985 aa5.71□□□□□ -1.5
SCFD1-223ENST00000557076 ANKS1AQ92625 1134 aa5.71□□□□□ -1.5
SCFD1-223ENST00000557076 EDAQ92838 391 aa5.71□□□□□ -1.5
SCFD1-223ENST00000557076 ATG4CQ96DT6 458 aa5.71□□□□□ -1.5
SCFD1-223ENST00000557076 TANGO6Q9C0B7 1094 aa5.71□□□□□ -1.5
SCFD1-223ENST00000557076 EPB41L4BQ9H329 900 aa5.71□□□□□ -1.5
SCFD1-223ENST00000557076 DCP1AQ9NPI6 582 aaPredicted RBP5.71□□□□□ -1.5
SCFD1-223ENST00000557076 SLAMF8Q9P0V8 285 aa5.71□□□□□ -1.5
SCFD1-223ENST00000557076 ZSWIM5Q9P217 1185 aa5.71□□□□□ -1.5
SCFD1-223ENST00000557076 SAP30BPQ9UHR5 308 aaKnown RBP5.71□□□□□ -1.5
SCFD1-223ENST00000557076 TMEM59LQ9UK28 342 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms