RNA–Protein interactions for RNA: ENST00000556833.1

CHD8-211, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-211ENST00000556833 DDX25Q9UHL0 483 aaKnown RBP16.59■□□□□ 0.25
CHD8-211ENST00000556833 NR2E1Q9Y466 385 aa16.59■□□□□ 0.25
CHD8-211ENST00000556833 CACNA1HO95180 2353 aa16.58■□□□□ 0.25
CHD8-211ENST00000556833 ZFHX2Q9C0A1 2572 aaPredicted RBP16.58■□□□□ 0.25
CHD8-211ENST00000556833 HOXB8P17481 243 aaPredicted RBP16.58■□□□□ 0.24
CHD8-211ENST00000556833 AVPR2P30518 371 aa16.58■□□□□ 0.24
CHD8-211ENST00000556833 SLC11A1P49279 550 aa16.58■□□□□ 0.24
CHD8-211ENST00000556833 AFF1P51825 1210 aaKnown RBP16.58■□□□□ 0.24
CHD8-211ENST00000556833 NONOQ15233 471 aaKnown RBP eCLIP16.58■□□□□ 0.24
CHD8-211ENST00000556833 NPY5RQ15761 445 aa16.58■□□□□ 0.24
CHD8-211ENST00000556833 NOMO2Q5JPE7 1267 aa16.58■□□□□ 0.24
CHD8-211ENST00000556833 GLB1LQ6UWU2 654 aa16.58■□□□□ 0.24
CHD8-211ENST00000556833 TMC5Q6UXY8 1006 aa16.58■□□□□ 0.24
CHD8-211ENST00000556833 RUFY3Q7L099 469 aa16.58■□□□□ 0.24
CHD8-211ENST00000556833 ZNF280BQ86YH2 543 aa16.58■□□□□ 0.24
CHD8-211ENST00000556833 TMEM143Q96AN5 459 aa16.58■□□□□ 0.24
CHD8-211ENST00000556833 VN1R3Q9BXE9 311 aa16.58■□□□□ 0.24
CHD8-211ENST00000556833 ADAM7Q9H2U9 754 aa16.58■□□□□ 0.24
CHD8-211ENST00000556833 GJB4Q9NTQ9 266 aa16.58■□□□□ 0.24
CHD8-211ENST00000556833 PLXNA3P51805 1871 aa16.58■□□□□ 0.24
CHD8-211ENST00000556833 DENND4AQ7Z401 1863 aa16.58■□□□□ 0.24
CHD8-211ENST00000556833 H0Y858 1186 aa16.57■□□□□ 0.24
CHD8-211ENST00000556833 REC8O95072 547 aa16.57■□□□□ 0.24
CHD8-211ENST00000556833 DEXIO95424 95 aa16.57■□□□□ 0.24
CHD8-211ENST00000556833 SRGAP2CP0DJJ0 459 aa16.57■□□□□ 0.24
CHD8-211ENST00000556833 FAM43BQ6ZT52 329 aaPredicted RBP16.57■□□□□ 0.24
CHD8-211ENST00000556833 RDM1Q8NG50 284 aa16.57■□□□□ 0.24
CHD8-211ENST00000556833 ATOH1Q92858 354 aaPredicted RBP16.57■□□□□ 0.24
CHD8-211ENST00000556833 IGSF21Q96ID5 467 aa16.57■□□□□ 0.24
CHD8-211ENST00000556833 WRAP73Q9P2S5 460 aaPredicted RBP16.57■□□□□ 0.24
CHD8-211ENST00000556833 DBR1Q9UK59 544 aaKnown RBP16.57■□□□□ 0.24
CHD8-211ENST00000556833 CYP46A1Q9Y6A2 500 aa16.57■□□□□ 0.24
CHD8-211ENST00000556833 IGKV6-21A0A0C4DH24 114 aa16.56■□□□□ 0.24
CHD8-211ENST00000556833 M0R2N6 131 aa16.56■□□□□ 0.24
CHD8-211ENST00000556833 C2CD2LO14523 706 aa16.56■□□□□ 0.24
CHD8-211ENST00000556833 MAFO75444 373 aaPredicted RBP16.56■□□□□ 0.24
CHD8-211ENST00000556833 OFD1O75665 1012 aa16.56■□□□□ 0.24
CHD8-211ENST00000556833 GALTP07902 379 aa16.56■□□□□ 0.24
CHD8-211ENST00000556833 PSMC5P62195 406 aa16.56■□□□□ 0.24
CHD8-211ENST00000556833 MTMR3Q13615 1198 aa16.56■□□□□ 0.24
CHD8-211ENST00000556833 BMS1Q14692 1282 aaKnown RBP16.56■□□□□ 0.24
CHD8-211ENST00000556833 B3GNT9Q6UX72 402 aa16.56■□□□□ 0.24
CHD8-211ENST00000556833 ZNF410Q86VK4 478 aa16.56■□□□□ 0.24
CHD8-211ENST00000556833 ZNF710Q8N1W2 664 aa16.56■□□□□ 0.24
CHD8-211ENST00000556833 FBXL16Q8N461 479 aa16.56■□□□□ 0.24
CHD8-211ENST00000556833 TDRD5Q8NAT2 981 aaKnown RBP16.56■□□□□ 0.24
CHD8-211ENST00000556833 CEP170P1Q96L14 293 aa16.56■□□□□ 0.24
CHD8-211ENST00000556833 RIPOR3Q96MK2 946 aa16.56■□□□□ 0.24
CHD8-211ENST00000556833 MINDY3Q9H8M7 445 aa16.56■□□□□ 0.24
CHD8-211ENST00000556833 CYP26B1Q9NR63 512 aa16.56■□□□□ 0.24
CHD8-211ENST00000556833 CHST12Q9NRB3 414 aa16.56■□□□□ 0.24
CHD8-211ENST00000556833 LIMD1Q9UGP4 676 aa16.56■□□□□ 0.24
CHD8-211ENST00000556833 PCDHB2Q9Y5E7 798 aa16.56■□□□□ 0.24
CHD8-211ENST00000556833 COL4A3BPQ9Y5P4 624 aa16.56■□□□□ 0.24
CHD8-211ENST00000556833 TDRD15B5MCY1 1934 aaKnown RBP16.55■□□□□ 0.24
CHD8-211ENST00000556833 CYP3A7-CYP3A51PA0A087WV96 503 aa16.55■□□□□ 0.24
CHD8-211ENST00000556833 DDHD2O94830 711 aa16.55■□□□□ 0.24
CHD8-211ENST00000556833 POMCP01189 267 aa16.55■□□□□ 0.24
CHD8-211ENST00000556833 CTSAP10619 480 aa16.55■□□□□ 0.24
CHD8-211ENST00000556833 CYP3A7P24462 503 aa16.55■□□□□ 0.24
CHD8-211ENST00000556833 MTHFRP42898 656 aa16.55■□□□□ 0.24
CHD8-211ENST00000556833 POLGP54098 1239 aaPredicted RBP16.55■□□□□ 0.24
CHD8-211ENST00000556833 EVCP57679 992 aa16.55■□□□□ 0.24
CHD8-211ENST00000556833 ITIH3Q06033 890 aa16.55■□□□□ 0.24
CHD8-211ENST00000556833 NCAPH2Q6IBW4 605 aa16.55■□□□□ 0.24
CHD8-211ENST00000556833 AGMOQ6ZNB7 445 aa16.55■□□□□ 0.24
CHD8-211ENST00000556833 DDX53Q86TM3 631 aaKnown RBP16.55■□□□□ 0.24
CHD8-211ENST00000556833 CABP7Q86V35 215 aa16.55■□□□□ 0.24
CHD8-211ENST00000556833 OXER1Q8TDS5 423 aa16.55■□□□□ 0.24
CHD8-211ENST00000556833 NECTIN4Q96NY8 510 aa16.55■□□□□ 0.24
CHD8-211ENST00000556833 C22orf23Q9BZE7 217 aa16.55■□□□□ 0.24
CHD8-211ENST00000556833 IFT122Q9HBG6 1241 aa16.55■□□□□ 0.24
CHD8-211ENST00000556833 ZSWIM6Q9HCJ5 1215 aa16.55■□□□□ 0.24
CHD8-211ENST00000556833 VAV3Q9UKW4 847 aa16.55■□□□□ 0.24
CHD8-211ENST00000556833 SORCS3Q9UPU3 1222 aa16.55■□□□□ 0.24
CHD8-211ENST00000556833 CCDC194A0A1B0GVG4 234 aa16.54■□□□□ 0.24
CHD8-211ENST00000556833 FAM205CA6NFA0 338 aa16.54■□□□□ 0.24
CHD8-211ENST00000556833 ZBTB39O15060 712 aa16.54■□□□□ 0.24
CHD8-211ENST00000556833 QARSP47897 775 aaKnown RBP16.54■□□□□ 0.24
CHD8-211ENST00000556833 FOSBP53539 338 aa16.54■□□□□ 0.24
CHD8-211ENST00000556833 CYP4A11Q02928 519 aa16.54■□□□□ 0.24
CHD8-211ENST00000556833 CTTNQ14247 550 aaKnown RBP16.54■□□□□ 0.24
CHD8-211ENST00000556833 PTPN14Q15678 1187 aa16.54■□□□□ 0.24
CHD8-211ENST00000556833 PIK3AP1Q6ZUJ8 805 aa16.54■□□□□ 0.24
CHD8-211ENST00000556833 KRT25Q7Z3Z0 450 aa16.54■□□□□ 0.24
CHD8-211ENST00000556833 DAGLBQ8NCG7 672 aa16.54■□□□□ 0.24
CHD8-211ENST00000556833 URGCPQ8TCY9 931 aa16.54■□□□□ 0.24
CHD8-211ENST00000556833 SLC22A17Q8WUG5 538 aa16.54■□□□□ 0.24
CHD8-211ENST00000556833 PRPF31Q8WWY3 499 aaKnown RBP16.54■□□□□ 0.24
CHD8-211ENST00000556833 MBOAT7Q96N66 472 aa16.54■□□□□ 0.24
CHD8-211ENST00000556833 APOL6Q9BWW8 343 aa16.54■□□□□ 0.24
CHD8-211ENST00000556833 INO80BQ9C086 356 aaPredicted RBP16.54■□□□□ 0.24
CHD8-211ENST00000556833 PDRG1Q9NUG6 133 aa16.54■□□□□ 0.24
CHD8-211ENST00000556833 AGPAT5Q9NUQ2 364 aa16.54■□□□□ 0.24
CHD8-211ENST00000556833 RGL1Q9NZL6 768 aa16.54■□□□□ 0.24
CHD8-211ENST00000556833 PRG3Q9Y2Y8 225 aaPredicted RBP16.54■□□□□ 0.24
CHD8-211ENST00000556833 CFAP54Q96N23 3096 aa16.53■□□□□ 0.24
CHD8-211ENST00000556833 MARCH6O60337 910 aa16.53■□□□□ 0.24
CHD8-211ENST00000556833 CCNT1O60563 726 aaKnown RBP16.53■□□□□ 0.24
CHD8-211ENST00000556833 GFRA3O60609 400 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms