RNA–Protein interactions for RNA: ENST00000556809.1

PABPN1-206, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 969 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-206ENST00000556809 BHMT2Q9H2M3 363 aa24.97■■□□□ 1.59
PABPN1-206ENST00000556809 CHST12Q9NRB3 414 aa24.97■■□□□ 1.59
PABPN1-206ENST00000556809 RNF216Q9NWF9 866 aaPredicted RBP24.97■■□□□ 1.59
PABPN1-206ENST00000556809 TMEM161AQ9NX61 479 aa24.97■■□□□ 1.59
PABPN1-206ENST00000556809 RCOR1Q9UKL0 485 aa24.97■■□□□ 1.59
PABPN1-206ENST00000556809 LRFN2Q9ULH4 789 aa24.97■■□□□ 1.59
PABPN1-206ENST00000556809 PRUNE2Q8WUY3 3088 aa24.96■■□□□ 1.59
PABPN1-206ENST00000556809 E9PMD0 336 aa24.96■■□□□ 1.59
PABPN1-206ENST00000556809 C5orf67F2Z3F1 127 aa24.96■■□□□ 1.59
PABPN1-206ENST00000556809 EYA4O95677 639 aa24.96■■□□□ 1.59
PABPN1-206ENST00000556809 SRGAP2CP0DJJ0 459 aa24.96■■□□□ 1.59
PABPN1-206ENST00000556809 USP49Q70CQ1 688 aa24.96■■□□□ 1.59
PABPN1-206ENST00000556809 KCNK18Q7Z418 384 aa24.96■■□□□ 1.59
PABPN1-206ENST00000556809 SRGAP1Q7Z6B7 1085 aa24.96■■□□□ 1.59
PABPN1-206ENST00000556809 RASSF8Q8NHQ8 419 aa24.96■■□□□ 1.59
PABPN1-206ENST00000556809 PLIN2Q99541 437 aa24.96■■□□□ 1.59
PABPN1-206ENST00000556809 TRAIPQ9BWF2 469 aa24.96■■□□□ 1.59
PABPN1-206ENST00000556809 MINDY3Q9H8M7 445 aa24.96■■□□□ 1.59
PABPN1-206ENST00000556809 LMCD1Q9NZU5 365 aa24.96■■□□□ 1.59
PABPN1-206ENST00000556809 TCHHQ07283 1943 aa24.96■■□□□ 1.59
PABPN1-206ENST00000556809 H3BNC9 293 aa24.95■■□□□ 1.58
PABPN1-206ENST00000556809 USO1O60763 962 aaKnown RBP24.95■■□□□ 1.58
PABPN1-206ENST00000556809 CUTAO60888 179 aa24.95■■□□□ 1.58
PABPN1-206ENST00000556809 BMPR1AP36894 532 aa24.95■■□□□ 1.58
PABPN1-206ENST00000556809 TXLNAP40222 546 aa24.95■■□□□ 1.58
PABPN1-206ENST00000556809 POU5F1BQ06416 359 aa24.95■■□□□ 1.58
PABPN1-206ENST00000556809 MXD4Q14582 209 aaPredicted RBP24.95■■□□□ 1.58
PABPN1-206ENST00000556809 KARSQ15046 597 aaKnown RBP24.95■■□□□ 1.58
PABPN1-206ENST00000556809 FAM102BQ5T8I3 360 aa24.95■■□□□ 1.58
PABPN1-206ENST00000556809 SLC17A8Q8NDX2 589 aa24.95■■□□□ 1.58
PABPN1-206ENST00000556809 ASAP3Q8TDY4 903 aa24.95■■□□□ 1.58
PABPN1-206ENST00000556809 RNF19AQ9NV58 838 aa24.95■■□□□ 1.58
PABPN1-206ENST00000556809 MRPL42Q9Y6G3 142 aaKnown RBP24.95■■□□□ 1.58
PABPN1-206ENST00000556809 REV3LO60673 3130 aa24.94■■□□□ 1.58
PABPN1-206ENST00000556809 A0A0U1RQF3 1178 aa24.94■■□□□ 1.58
PABPN1-206ENST00000556809 GTPBP6O43824 516 aaPredicted RBP24.94■■□□□ 1.58
PABPN1-206ENST00000556809 ME1P48163 572 aa24.94■■□□□ 1.58
PABPN1-206ENST00000556809 CCDC85BQ15834 202 aaPredicted RBP24.94■■□□□ 1.58
PABPN1-206ENST00000556809 PADI6Q6TGC4 694 aa24.94■■□□□ 1.58
PABPN1-206ENST00000556809 ZNF598Q86UK7 904 aaKnown RBP24.94■■□□□ 1.58
PABPN1-206ENST00000556809 ECHDC2Q86YB7 292 aa24.94■■□□□ 1.58
PABPN1-206ENST00000556809 IFNLR1Q8IU57 520 aaPredicted RBP24.94■■□□□ 1.58
PABPN1-206ENST00000556809 RNF149Q8NC42 400 aa24.94■■□□□ 1.58
PABPN1-206ENST00000556809 LEO1Q8WVC0 666 aaPredicted RBP24.94■■□□□ 1.58
PABPN1-206ENST00000556809 PPM1EQ8WY54 764 aa24.94■■□□□ 1.58
PABPN1-206ENST00000556809 SPATA32Q96LK8 384 aa24.94■■□□□ 1.58
PABPN1-206ENST00000556809 DACT1Q9NYF0 836 aa24.94■■□□□ 1.58
PABPN1-206ENST00000556809 RWDD3Q9Y3V2 267 aa24.94■■□□□ 1.58
PABPN1-206ENST00000556809 RB1P06400 928 aa24.93■■□□□ 1.58
PABPN1-206ENST00000556809 PLCG1P19174 1290 aa24.93■■□□□ 1.58
PABPN1-206ENST00000556809 IBSPP21815 317 aaPredicted RBP24.93■■□□□ 1.58
PABPN1-206ENST00000556809 GLRA2P23416 452 aa24.93■■□□□ 1.58
PABPN1-206ENST00000556809 PTENP60484 403 aa24.93■■□□□ 1.58
PABPN1-206ENST00000556809 PAN2Q504Q3 1202 aaKnown RBP24.93■■□□□ 1.58
PABPN1-206ENST00000556809 AXDND1Q5T1B0 1012 aaPredicted RBP24.93■■□□□ 1.58
PABPN1-206ENST00000556809 CATSPER4Q7RTX7 472 aa24.93■■□□□ 1.58
PABPN1-206ENST00000556809 SCAND2PQ9GZW5 306 aaPredicted RBP24.93■■□□□ 1.58
PABPN1-206ENST00000556809 CCDC39Q9UFE4 941 aa24.93■■□□□ 1.58
PABPN1-206ENST00000556809 PCDHA7Q9UN72 937 aa24.93■■□□□ 1.58
PABPN1-206ENST00000556809 FGFR1P11362 822 aa24.92■■□□□ 1.58
PABPN1-206ENST00000556809 ATF7P17544 494 aaPredicted RBP24.92■■□□□ 1.58
PABPN1-206ENST00000556809 CYP11B2P19099 503 aa24.92■■□□□ 1.58
PABPN1-206ENST00000556809 GPM6BQ13491 265 aa24.92■■□□□ 1.58
PABPN1-206ENST00000556809 CAPSQ13938 189 aa24.92■■□□□ 1.58
PABPN1-206ENST00000556809 PHF6Q8IWS0 365 aaKnown RBP eCLIP24.92■■□□□ 1.58
PABPN1-206ENST00000556809 MCPH1Q8NEM0 835 aa24.92■■□□□ 1.58
PABPN1-206ENST00000556809 NFKBIZQ9BYH8 718 aa24.92■■□□□ 1.58
PABPN1-206ENST00000556809 POLR3FQ9H1D9 316 aaPredicted RBP24.92■■□□□ 1.58
PABPN1-206ENST00000556809 AGPAT5Q9NUQ2 364 aa24.92■■□□□ 1.58
PABPN1-206ENST00000556809 CHMP5Q9NZZ3 219 aa24.92■■□□□ 1.58
PABPN1-206ENST00000556809 ATG2AQ2TAZ0 1938 aa24.92■■□□□ 1.58
PABPN1-206ENST00000556809 UNC80Q8N2C7 3258 aa24.91■■□□□ 1.58
PABPN1-206ENST00000556809 EOMESO95936 686 aa24.91■■□□□ 1.58
PABPN1-206ENST00000556809 HOXA11P31270 313 aaPredicted RBP24.91■■□□□ 1.58
PABPN1-206ENST00000556809 CTNNB1P35222 781 aa24.91■■□□□ 1.58
PABPN1-206ENST00000556809 PHKA2P46019 1235 aa24.91■■□□□ 1.58
PABPN1-206ENST00000556809 LRRC15Q8TF66 581 aa24.91■■□□□ 1.58
PABPN1-206ENST00000556809 IPO9Q96P70 1041 aaKnown RBP24.91■■□□□ 1.58
PABPN1-206ENST00000556809 PLVAPQ9BX97 442 aa24.91■■□□□ 1.58
PABPN1-206ENST00000556809 GPRC5CQ9NQ84 441 aa24.91■■□□□ 1.58
PABPN1-206ENST00000556809 PRDM6Q9NQX0 595 aa24.91■■□□□ 1.58
PABPN1-206ENST00000556809 PIN4Q9Y237 131 aaKnown RBP24.91■■□□□ 1.58
PABPN1-206ENST00000556809 TBKBP1A7MCY6 615 aa24.9■■□□□ 1.58
PABPN1-206ENST00000556809 PLA2G4BP0C869 781 aa24.9■■□□□ 1.58
PABPN1-206ENST00000556809 TFDP1Q14186 410 aa24.9■■□□□ 1.58
PABPN1-206ENST00000556809 PCBP1Q15365 356 aaKnown RBP eCLIP24.9■■□□□ 1.581e-6■■□□□ 14.3
PABPN1-206ENST00000556809 SHC4Q6S5L8 630 aa24.9■■□□□ 1.58
PABPN1-206ENST00000556809 MAEAQ7L5Y9 396 aa24.9■■□□□ 1.58
PABPN1-206ENST00000556809 CASD1Q96PB1 797 aa24.9■■□□□ 1.58
PABPN1-206ENST00000556809 BLOC1S4Q9NUP1 217 aa24.9■■□□□ 1.58
PABPN1-206ENST00000556809 SPTBN5Q9NRC6 3674 aaKnown RBP24.9■■□□□ 1.58
PABPN1-206ENST00000556809 SSBP05455 408 aaKnown RBP eCLIP24.89■■□□□ 1.58
PABPN1-206ENST00000556809 MBTD1Q05BQ5 628 aa24.89■■□□□ 1.58
PABPN1-206ENST00000556809 CLLU1OSQ5K130 101 aa24.89■■□□□ 1.58
PABPN1-206ENST00000556809 RRAGBQ5VZM2 374 aa24.89■■□□□ 1.58
PABPN1-206ENST00000556809 MICALL1Q8N3F8 863 aa24.89■■□□□ 1.58
PABPN1-206ENST00000556809 SYT2Q8N9I0 419 aaPredicted RBP24.89■■□□□ 1.58
PABPN1-206ENST00000556809 P2RX5Q93086 422 aa24.89■■□□□ 1.58
PABPN1-206ENST00000556809 MRPL38Q96DV4 380 aaKnown RBP24.89■■□□□ 1.58
PABPN1-206ENST00000556809 RUSC1Q9BVN2 902 aa24.89■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms