RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 FSIP1Q8NA03 581 aa19.33■□□□□ 0.68
SHMT2-225ENST00000556798 IQUBQ8NA54 791 aa19.33■□□□□ 0.68
SHMT2-225ENST00000556798 DEPTORQ8TB45 409 aa19.33■□□□□ 0.68
SHMT2-225ENST00000556798 ADAM2Q99965 735 aa19.33■□□□□ 0.68
SHMT2-225ENST00000556798 TSPYL2Q9H2G4 693 aaPredicted RBP19.33■□□□□ 0.68
SHMT2-225ENST00000556798 PIN4Q9Y237 131 aaKnown RBP19.33■□□□□ 0.68
SHMT2-225ENST00000556798 FNDC1Q4ZHG4 1894 aaPredicted RBP19.33■□□□□ 0.68
SHMT2-225ENST00000556798 UPP2O95045 317 aa19.32■□□□□ 0.68
SHMT2-225ENST00000556798 LIG1P18858 919 aa19.32■□□□□ 0.68
SHMT2-225ENST00000556798 NPTX2P47972 431 aa19.32■□□□□ 0.68
SHMT2-225ENST00000556798 POU5F1BQ06416 359 aa19.32■□□□□ 0.68
SHMT2-225ENST00000556798 DMP1Q13316 513 aaPredicted RBP19.32■□□□□ 0.68
SHMT2-225ENST00000556798 DSC3Q14574 896 aa19.32■□□□□ 0.68
SHMT2-225ENST00000556798 MRPS27Q92552 414 aaKnown RBP19.32■□□□□ 0.68
SHMT2-225ENST00000556798 NFKBIZQ9BYH8 718 aa19.32■□□□□ 0.68
SHMT2-225ENST00000556798 GOLPH3LQ9H4A5 285 aa19.32■□□□□ 0.68
SHMT2-225ENST00000556798 ZHX3Q9H4I2 956 aa19.32■□□□□ 0.68
SHMT2-225ENST00000556798 AGPAT5Q9NUQ2 364 aa19.32■□□□□ 0.68
SHMT2-225ENST00000556798 ODF2LQ9ULJ1 636 aa19.32■□□□□ 0.68
SHMT2-225ENST00000556798 HPSEQ9Y251 543 aa19.32■□□□□ 0.68
SHMT2-225ENST00000556798 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.31■□□□□ 0.68
SHMT2-225ENST00000556798 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.31■□□□□ 0.68
SHMT2-225ENST00000556798 A0A1W2PQ27 194 aa19.31■□□□□ 0.68
SHMT2-225ENST00000556798 A0A1W2PQ64 194 aa19.31■□□□□ 0.68
SHMT2-225ENST00000556798 A0A1W2PQD8 194 aa19.31■□□□□ 0.68
SHMT2-225ENST00000556798 TSPAN1O60635 241 aa19.31■□□□□ 0.68
SHMT2-225ENST00000556798 TBCAO75347 108 aaKnown RBP19.31■□□□□ 0.68
SHMT2-225ENST00000556798 ERLIN2O94905 339 aa19.31■□□□□ 0.68
SHMT2-225ENST00000556798 FAM13AO94988 1023 aa19.31■□□□□ 0.68
SHMT2-225ENST00000556798 PLS3P13797 630 aa19.31■□□□□ 0.68
SHMT2-225ENST00000556798 PBX2P40425 430 aa19.31■□□□□ 0.68
SHMT2-225ENST00000556798 NDUFA8P51970 172 aa19.31■□□□□ 0.68
SHMT2-225ENST00000556798 HERC6Q8IVU3 1022 aa19.31■□□□□ 0.68
SHMT2-225ENST00000556798 DDX12PQ92771 950 aa19.31■□□□□ 0.68
SHMT2-225ENST00000556798 C2orf40Q9H1Z8 148 aa19.31■□□□□ 0.68
SHMT2-225ENST00000556798 KMT5AQ9NQR1 393 aa19.31■□□□□ 0.68
SHMT2-225ENST00000556798 NLRC5Q86WI3 1866 aa19.31■□□□□ 0.68
SHMT2-225ENST00000556798 KIAA1671Q9BY89 1806 aa19.3■□□□□ 0.68
SHMT2-225ENST00000556798 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.3■□□□□ 0.68
SHMT2-225ENST00000556798 SLC16A4O15374 487 aa19.3■□□□□ 0.68
SHMT2-225ENST00000556798 B4GALT5O43286 388 aa19.3■□□□□ 0.68
SHMT2-225ENST00000556798 EDN1P05305 212 aa19.3■□□□□ 0.68
SHMT2-225ENST00000556798 MYOGP15173 224 aa19.3■□□□□ 0.68
SHMT2-225ENST00000556798 ZSCAN20P17040 1043 aaPredicted RBP19.3■□□□□ 0.68
SHMT2-225ENST00000556798 AMHR2Q16671 573 aa19.3■□□□□ 0.68
SHMT2-225ENST00000556798 PHOSPHO2Q8TCD6 241 aa19.3■□□□□ 0.68
SHMT2-225ENST00000556798 LRCH3Q96II8 777 aa19.3■□□□□ 0.68
SHMT2-225ENST00000556798 CPB2Q96IY4 423 aa19.3■□□□□ 0.68
SHMT2-225ENST00000556798 CCDC113Q9H0I3 377 aa19.3■□□□□ 0.68
SHMT2-225ENST00000556798 TNMDQ9H2S6 317 aa19.3■□□□□ 0.68
SHMT2-225ENST00000556798 CUEDC2Q9H467 287 aa19.3■□□□□ 0.68
SHMT2-225ENST00000556798 C17orf75Q9HAS0 396 aa19.3■□□□□ 0.68
SHMT2-225ENST00000556798 RGS18Q9NS28 235 aa19.3■□□□□ 0.68
SHMT2-225ENST00000556798 SERTAD1Q9UHV2 236 aa19.3■□□□□ 0.68
SHMT2-225ENST00000556798 USP20Q9Y2K6 914 aa19.3■□□□□ 0.68
SHMT2-225ENST00000556798 COL4A6Q14031 1691 aa19.3■□□□□ 0.68
SHMT2-225ENST00000556798 FAM237AA0A1B0GTK4 181 aa19.29■□□□□ 0.68
SHMT2-225ENST00000556798 GOLGA6L4A6NEF3 574 aa19.29■□□□□ 0.68
SHMT2-225ENST00000556798 ACTN4O43707 911 aaKnown RBP19.29■□□□□ 0.68
SHMT2-225ENST00000556798 PRKCBP05771 671 aa19.29■□□□□ 0.68
SHMT2-225ENST00000556798 SYKP43405 635 aa19.29■□□□□ 0.68
SHMT2-225ENST00000556798 ZNF131P52739 623 aa19.29■□□□□ 0.68
SHMT2-225ENST00000556798 TWF2Q6IBS0 349 aaKnown RBP19.29■□□□□ 0.68
SHMT2-225ENST00000556798 MYCT1Q8N699 235 aa19.29■□□□□ 0.68
SHMT2-225ENST00000556798 TOP1MTQ969P6 601 aa19.29■□□□□ 0.68
SHMT2-225ENST00000556798 DNAJC19Q96DA6 116 aa19.29■□□□□ 0.68
SHMT2-225ENST00000556798 PBX4Q9BYU1 374 aa19.29■□□□□ 0.68
SHMT2-225ENST00000556798 PARVGQ9HBI0 331 aa19.29■□□□□ 0.68
SHMT2-225ENST00000556798 C1orf112Q9NSG2 853 aa19.29■□□□□ 0.68
SHMT2-225ENST00000556798 KBTBD4Q9NVX7 518 aa19.29■□□□□ 0.68
SHMT2-225ENST00000556798 PHLPP2Q6ZVD8 1323 aa19.28■□□□□ 0.68
SHMT2-225ENST00000556798 TTLL13PA6NNM8 815 aa19.28■□□□□ 0.68
SHMT2-225ENST00000556798 C9IYK1 514 aa19.28■□□□□ 0.68
SHMT2-225ENST00000556798 GJB5O95377 273 aa19.28■□□□□ 0.68
SHMT2-225ENST00000556798 IDEP14735 1019 aa19.28■□□□□ 0.68
SHMT2-225ENST00000556798 ARF4P18085 180 aaPredicted RBP19.28■□□□□ 0.68
SHMT2-225ENST00000556798 CASP1P29466 404 aa19.28■□□□□ 0.68
SHMT2-225ENST00000556798 HOXA11P31270 313 aaPredicted RBP19.28■□□□□ 0.68
SHMT2-225ENST00000556798 AFMP43652 599 aa19.28■□□□□ 0.68
SHMT2-225ENST00000556798 SARSP49591 514 aaKnown RBP19.28■□□□□ 0.68
SHMT2-225ENST00000556798 SMAD3P84022 425 aaKnown RBP19.28■□□□□ 0.68
SHMT2-225ENST00000556798 MAPK6Q16659 721 aa19.28■□□□□ 0.68
SHMT2-225ENST00000556798 SLC24A5Q71RS6 500 aa19.28■□□□□ 0.68
SHMT2-225ENST00000556798 CDR2LQ86X02 465 aaPredicted RBP19.28■□□□□ 0.68
SHMT2-225ENST00000556798 SFR1Q86XK3 245 aa19.28■□□□□ 0.68
SHMT2-225ENST00000556798 GRAMD1CQ8IYS0 662 aa19.28■□□□□ 0.68
SHMT2-225ENST00000556798 CEP57L1Q8IYX8 460 aa19.28■□□□□ 0.68
SHMT2-225ENST00000556798 SPIRE2Q8WWL2 714 aa19.28■□□□□ 0.68
SHMT2-225ENST00000556798 PYM1Q9BRP8 204 aaKnown RBP19.28■□□□□ 0.68
SHMT2-225ENST00000556798 ZBED2Q9BTP6 218 aa19.28■□□□□ 0.68
SHMT2-225ENST00000556798 FZD8Q9H461 694 aa19.28■□□□□ 0.68
SHMT2-225ENST00000556798 MAGEF1Q9HAY2 307 aa19.28■□□□□ 0.68
SHMT2-225ENST00000556798 CHST12Q9NRB3 414 aa19.28■□□□□ 0.68
SHMT2-225ENST00000556798 PRMT7Q9NVM4 692 aaPredicted RBP19.28■□□□□ 0.68
SHMT2-225ENST00000556798 DACT1Q9NYF0 836 aa19.28■□□□□ 0.68
SHMT2-225ENST00000556798 LARSQ9P2J5 1176 aaKnown RBP19.28■□□□□ 0.68
SHMT2-225ENST00000556798 ARHGAP28Q9P2N2 729 aa19.28■□□□□ 0.68
SHMT2-225ENST00000556798 YBX2Q9Y2T7 364 aaKnown RBP19.28■□□□□ 0.68
SHMT2-225ENST00000556798 TLL1O43897 1013 aa19.27■□□□□ 0.68
SHMT2-225ENST00000556798 EFNA5P52803 228 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms