RNA–Protein interactions for RNA: ENST00000556607.1

SPTLC2-205, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-205ENST00000556607 EIF2AK1Q9BQI3 630 aaKnown RBP11.81□□□□□ -0.52
SPTLC2-205ENST00000556607 GBP3Q9H0R5 595 aa11.81□□□□□ -0.52
SPTLC2-205ENST00000556607 TTC12Q9H892 705 aaPredicted RBP11.81□□□□□ -0.52
SPTLC2-205ENST00000556607 FAM105AQ9NUU6 356 aa11.81□□□□□ -0.52
SPTLC2-205ENST00000556607 RNF19AQ9NV58 838 aa11.81□□□□□ -0.52
SPTLC2-205ENST00000556607 FSD2A1L4K1 749 aa11.8□□□□□ -0.52
SPTLC2-205ENST00000556607 ZBTB39O15060 712 aa11.8□□□□□ -0.52
SPTLC2-205ENST00000556607 GAS2O43903 313 aaKnown RBP11.8□□□□□ -0.52
SPTLC2-205ENST00000556607 ERLIN2O94905 339 aa11.8□□□□□ -0.52
SPTLC2-205ENST00000556607 MCM7P33993 719 aa11.8□□□□□ -0.52
SPTLC2-205ENST00000556607 RAB27AP51159 221 aa11.8□□□□□ -0.52
SPTLC2-205ENST00000556607 BCAR1P56945 870 aa11.8□□□□□ -0.52
SPTLC2-205ENST00000556607 PLCB3Q01970 1234 aa11.8□□□□□ -0.52
SPTLC2-205ENST00000556607 LAMTOR4Q0VGL1 99 aa11.8□□□□□ -0.52
SPTLC2-205ENST00000556607 DUSP6Q16828 381 aa11.8□□□□□ -0.52
SPTLC2-205ENST00000556607 GLB1LQ6UWU2 654 aa11.8□□□□□ -0.52
SPTLC2-205ENST00000556607 SRGAP1Q7Z6B7 1085 aa11.8□□□□□ -0.52
SPTLC2-205ENST00000556607 ZNF598Q86UK7 904 aaKnown RBP11.8□□□□□ -0.52
SPTLC2-205ENST00000556607 RNF149Q8NC42 400 aa11.8□□□□□ -0.52
SPTLC2-205ENST00000556607 PGBD4Q96DM1 585 aa11.8□□□□□ -0.52
SPTLC2-205ENST00000556607 TMEM169Q96HH4 297 aa11.8□□□□□ -0.52
SPTLC2-205ENST00000556607 FAM193BQ96PV7 902 aaPredicted RBP11.8□□□□□ -0.52
SPTLC2-205ENST00000556607 CDCA3Q99618 268 aaPredicted RBP11.8□□□□□ -0.52
SPTLC2-205ENST00000556607 APOL5Q9BWW9 433 aa11.8□□□□□ -0.52
SPTLC2-205ENST00000556607 DHX33Q9H6R0 707 aaKnown RBP11.8□□□□□ -0.52
SPTLC2-205ENST00000556607 CLEC1BQ9P126 229 aa11.8□□□□□ -0.52
SPTLC2-205ENST00000556607 LIMCH1Q9UPQ0 1083 aa11.8□□□□□ -0.52
SPTLC2-205ENST00000556607 LZTS1Q9Y250 596 aa11.8□□□□□ -0.52
SPTLC2-205ENST00000556607 HCN4Q9Y3Q4 1203 aa11.8□□□□□ -0.52
SPTLC2-205ENST00000556607 PPME1Q9Y570 386 aa11.8□□□□□ -0.52
SPTLC2-205ENST00000556607 MYO7AQ13402 2215 aa11.8□□□□□ -0.52
SPTLC2-205ENST00000556607 ASAP2O43150 1006 aa11.79□□□□□ -0.52
SPTLC2-205ENST00000556607 DCXO43602 365 aa11.79□□□□□ -0.52
SPTLC2-205ENST00000556607 GPR37L1O60883 481 aa11.79□□□□□ -0.52
SPTLC2-205ENST00000556607 SLITRK3O94933 977 aa11.79□□□□□ -0.52
SPTLC2-205ENST00000556607 GLP2RO95838 553 aa11.79□□□□□ -0.52
SPTLC2-205ENST00000556607 ATF7P17544 494 aaPredicted RBP11.79□□□□□ -0.52
SPTLC2-205ENST00000556607 TECP42680 631 aa11.79□□□□□ -0.52
SPTLC2-205ENST00000556607 RBM10P98175 930 aaKnown RBP11.79□□□□□ -0.52
SPTLC2-205ENST00000556607 NCBP1Q09161 790 aaKnown RBP11.79□□□□□ -0.52
SPTLC2-205ENST00000556607 SMC1AQ14683 1233 aaKnown RBP11.79□□□□□ -0.52
SPTLC2-205ENST00000556607 FERMT3Q86UX7 667 aa11.79□□□□□ -0.52
SPTLC2-205ENST00000556607 FAM184AQ8NB25 1140 aa11.79□□□□□ -0.52
SPTLC2-205ENST00000556607 URGCPQ8TCY9 931 aa11.79□□□□□ -0.52
SPTLC2-205ENST00000556607 TNFRSF25Q93038 417 aa11.79□□□□□ -0.52
SPTLC2-205ENST00000556607 C8orf76Q96K31 380 aa11.79□□□□□ -0.52
SPTLC2-205ENST00000556607 MSLNLQ96KJ4 702 aa11.79□□□□□ -0.52
SPTLC2-205ENST00000556607 IFT122Q9HBG6 1241 aa11.79□□□□□ -0.52
SPTLC2-205ENST00000556607 NGRNQ9NPE2 291 aaKnown RBP11.79□□□□□ -0.52
SPTLC2-205ENST00000556607 MUC3AQ02505 3323 aa11.79□□□□□ -0.52
SPTLC2-205ENST00000556607 A0A087WWV3 80 aa11.78□□□□□ -0.52
SPTLC2-205ENST00000556607 HIDE1A8MVS5 230 aa11.78□□□□□ -0.52
SPTLC2-205ENST00000556607 INO80B-WBP1J3KQ70 363 aa11.78□□□□□ -0.52
SPTLC2-205ENST00000556607 FSCN2O14926 492 aa11.78□□□□□ -0.52
SPTLC2-205ENST00000556607 SPIRE1Q08AE8 756 aa11.78□□□□□ -0.52
SPTLC2-205ENST00000556607 COASYQ13057 564 aa11.78□□□□□ -0.52
SPTLC2-205ENST00000556607 TFDP1Q14186 410 aa11.78□□□□□ -0.52
SPTLC2-205ENST00000556607 MXD4Q14582 209 aaPredicted RBP11.78□□□□□ -0.52
SPTLC2-205ENST00000556607 NOMO2Q5JPE7 1267 aa11.78□□□□□ -0.52
SPTLC2-205ENST00000556607 MAEAQ7L5Y9 396 aa11.78□□□□□ -0.52
SPTLC2-205ENST00000556607 SLC39A11Q8N1S5 342 aa11.78□□□□□ -0.52
SPTLC2-205ENST00000556607 SMRP1Q8NCR6 262 aa11.78□□□□□ -0.52
SPTLC2-205ENST00000556607 RPGRIP1Q96KN7 1286 aa11.78□□□□□ -0.52
SPTLC2-205ENST00000556607 AGPAT5Q9NUQ2 364 aa11.78□□□□□ -0.52
SPTLC2-205ENST00000556607 USP15Q9Y4E8 981 aaPredicted RBP11.78□□□□□ -0.52
SPTLC2-205ENST00000556607 PCDHB2Q9Y5E7 798 aa11.78□□□□□ -0.52
SPTLC2-205ENST00000556607 POTEMA6NI47 508 aa11.77□□□□□ -0.53
SPTLC2-205ENST00000556607 C19orf67A6NJJ6 358 aa11.77□□□□□ -0.53
SPTLC2-205ENST00000556607 SPDYE4A6NLX3 237 aa11.77□□□□□ -0.53
SPTLC2-205ENST00000556607 MEIS3P2A8K0S8 358 aa11.77□□□□□ -0.53
SPTLC2-205ENST00000556607 WNT7AO00755 349 aa11.77□□□□□ -0.53
SPTLC2-205ENST00000556607 USO1O60763 962 aaKnown RBP11.77□□□□□ -0.53
SPTLC2-205ENST00000556607 OFD1O75665 1012 aa11.77□□□□□ -0.53
SPTLC2-205ENST00000556607 DGAT1O75907 488 aa11.77□□□□□ -0.53
SPTLC2-205ENST00000556607 EYA4O95677 639 aa11.77□□□□□ -0.53
SPTLC2-205ENST00000556607 CXCL14O95715 111 aa11.77□□□□□ -0.53
SPTLC2-205ENST00000556607 ZNF174Q15697 407 aa11.77□□□□□ -0.53
SPTLC2-205ENST00000556607 RNF135Q8IUD6 432 aa11.77□□□□□ -0.53
SPTLC2-205ENST00000556607 VPS52Q8N1B4 723 aa11.77□□□□□ -0.53
SPTLC2-205ENST00000556607 PIGOQ8TEQ8 1089 aa11.77□□□□□ -0.53
SPTLC2-205ENST00000556607 FAM122AQ96E09 287 aa11.77□□□□□ -0.53
SPTLC2-205ENST00000556607 CPB2Q96IY4 423 aa11.77□□□□□ -0.53
SPTLC2-205ENST00000556607 ZSCAN31Q96LW9 406 aaPredicted RBP11.77□□□□□ -0.53
SPTLC2-205ENST00000556607 TRAIPQ9BWF2 469 aa11.77□□□□□ -0.53
SPTLC2-205ENST00000556607 APOL6Q9BWW8 343 aa11.77□□□□□ -0.53
SPTLC2-205ENST00000556607 TRIM6Q9C030 488 aaPredicted RBP11.77□□□□□ -0.53
SPTLC2-205ENST00000556607 NRDE2Q9H7Z3 1164 aa11.77□□□□□ -0.53
SPTLC2-205ENST00000556607 MINDY3Q9H8M7 445 aa11.77□□□□□ -0.53
SPTLC2-205ENST00000556607 RSAD1Q9HA92 442 aa11.77□□□□□ -0.53
SPTLC2-205ENST00000556607 TBC1D13Q9NVG8 400 aa11.77□□□□□ -0.53
SPTLC2-205ENST00000556607 MUTYHQ9UIF7 546 aa11.77□□□□□ -0.53
SPTLC2-205ENST00000556607 TDRD15B5MCY1 1934 aaKnown RBP11.77□□□□□ -0.53
SPTLC2-205ENST00000556607 CUL9Q8IWT3 2517 aa11.77□□□□□ -0.53
SPTLC2-205ENST00000556607 BRWD1Q9NSI6 2320 aa11.76□□□□□ -0.53
SPTLC2-205ENST00000556607 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.76□□□□□ -0.53
SPTLC2-205ENST00000556607 CARNS1A5YM72 827 aa11.76□□□□□ -0.53
SPTLC2-205ENST00000556607 PRR33A8MZF0 331 aa11.76□□□□□ -0.53
SPTLC2-205ENST00000556607 ZNF623O75123 536 aa11.76□□□□□ -0.53
SPTLC2-205ENST00000556607 POMCP01189 267 aa11.76□□□□□ -0.53
SPTLC2-205ENST00000556607 SSBP05455 408 aaKnown RBP eCLIP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms