RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 TMEM62Q0P6H9 643 aa6.71□□□□□ -1.34
TDP1-215ENST00000556498 AP1B1Q10567 949 aa6.71□□□□□ -1.34
TDP1-215ENST00000556498 NFIAQ12857 509 aa6.71□□□□□ -1.34
TDP1-215ENST00000556498 OASLQ15646 514 aaKnown RBP6.71□□□□□ -1.34
TDP1-215ENST00000556498 CFAP100Q494V2 611 aa6.71□□□□□ -1.34
TDP1-215ENST00000556498 GRAMD4Q6IC98 578 aa6.71□□□□□ -1.34
TDP1-215ENST00000556498 PLBD1Q6P4A8 553 aa6.71□□□□□ -1.34
TDP1-215ENST00000556498 C16orf54Q6UWD8 224 aa6.71□□□□□ -1.34
TDP1-215ENST00000556498 CRELD2Q6UXH1 353 aaPredicted RBP6.71□□□□□ -1.34
TDP1-215ENST00000556498 ZNF365Q70YC5 407 aa6.71□□□□□ -1.34
TDP1-215ENST00000556498 HS2ST1Q7LGA3 356 aa6.71□□□□□ -1.34
TDP1-215ENST00000556498 KRT28Q7Z3Y7 464 aa6.71□□□□□ -1.34
TDP1-215ENST00000556498 MRPL10Q7Z7H8 261 aaKnown RBP6.71□□□□□ -1.34
TDP1-215ENST00000556498 NLRP10Q86W26 655 aa6.71□□□□□ -1.34
TDP1-215ENST00000556498 FAM20CQ8IXL6 584 aa6.71□□□□□ -1.34
TDP1-215ENST00000556498 BBOF1Q8ND07 529 aa6.71□□□□□ -1.34
TDP1-215ENST00000556498 FNIP1Q8TF40 1166 aa6.71□□□□□ -1.34
TDP1-215ENST00000556498 ARL5BQ96KC2 179 aa6.71□□□□□ -1.34
TDP1-215ENST00000556498 TBC1D32Q96NH3 1257 aa6.71□□□□□ -1.34
TDP1-215ENST00000556498 TRAPPC9Q96Q05 1148 aa6.71□□□□□ -1.34
TDP1-215ENST00000556498 NUF2Q9BZD4 464 aa6.71□□□□□ -1.34
TDP1-215ENST00000556498 PUS3Q9BZE2 481 aaKnown RBP6.71□□□□□ -1.34
TDP1-215ENST00000556498 OSBPL2Q9H1P3 480 aa6.71□□□□□ -1.34
TDP1-215ENST00000556498 EHMT1Q9H9B1 1298 aa6.71□□□□□ -1.34
TDP1-215ENST00000556498 VPS37BQ9H9H4 285 aa6.71□□□□□ -1.34
TDP1-215ENST00000556498 C12orf10Q9HB07 376 aa6.71□□□□□ -1.34
TDP1-215ENST00000556498 RRAGCQ9HB90 399 aa6.71□□□□□ -1.34
TDP1-215ENST00000556498 WDR35Q9P2L0 1181 aa6.71□□□□□ -1.34
TDP1-215ENST00000556498 CRNNQ9UBG3 495 aaPredicted RBP6.71□□□□□ -1.34
TDP1-215ENST00000556498 LAMP5Q9UJQ1 280 aa6.71□□□□□ -1.34
TDP1-215ENST00000556498 AGTPBP1Q9UPW5 1226 aa6.71□□□□□ -1.34
TDP1-215ENST00000556498 PCDHB4Q9Y5E5 795 aa6.71□□□□□ -1.34
TDP1-215ENST00000556498 FADS3Q9Y5Q0 445 aa6.71□□□□□ -1.34
TDP1-215ENST00000556498 ERCC6Q03468 1493 aa6.71□□□□□ -1.34
TDP1-215ENST00000556498 USP19O94966 1318 aa6.71□□□□□ -1.34
TDP1-215ENST00000556498 KDM2BQ8NHM5 1336 aa6.71□□□□□ -1.34
TDP1-215ENST00000556498 ERICH3Q5RHP9 1530 aa6.71□□□□□ -1.34
TDP1-215ENST00000556498 TOPBP1Q92547 1522 aa6.71□□□□□ -1.34
TDP1-215ENST00000556498 SOGA1O94964 1423 aa6.7□□□□□ -1.34
TDP1-215ENST00000556498 BIVM-ERCC5R4GMW8 1640 aa6.7□□□□□ -1.34
TDP1-215ENST00000556498 OR6C65A6NJZ3 312 aa6.7□□□□□ -1.34
TDP1-215ENST00000556498 PLOD2O00469 737 aa6.7□□□□□ -1.34
TDP1-215ENST00000556498 PSMD14O00487 310 aa6.7□□□□□ -1.34
TDP1-215ENST00000556498 SRGAP3O43295 1099 aa6.7□□□□□ -1.34
TDP1-215ENST00000556498 ZBTB14O43829 449 aa6.7□□□□□ -1.34
TDP1-215ENST00000556498 GUCY1B2O75343 617 aa6.7□□□□□ -1.34
TDP1-215ENST00000556498 APOEP02649 317 aa6.7□□□□□ -1.34
TDP1-215ENST00000556498 CYP17A1P05093 508 aa6.7□□□□□ -1.34
TDP1-215ENST00000556498 TUBBP07437 444 aa6.7□□□□□ -1.34
TDP1-215ENST00000556498 DLATP10515 647 aaKnown RBP6.7□□□□□ -1.34
TDP1-215ENST00000556498 CDC25BP30305 580 aa6.7□□□□□ -1.34
TDP1-215ENST00000556498 TRIM23P36406 574 aa6.7□□□□□ -1.34
TDP1-215ENST00000556498 ATP6V1E1P36543 226 aa6.7□□□□□ -1.34
TDP1-215ENST00000556498 NR2C2P49116 596 aa6.7□□□□□ -1.34
TDP1-215ENST00000556498 ETV1P50549 477 aa6.7□□□□□ -1.34
TDP1-215ENST00000556498 GPC3P51654 580 aa6.7□□□□□ -1.34
TDP1-215ENST00000556498 THOP1P52888 689 aa6.7□□□□□ -1.34
TDP1-215ENST00000556498 MTTPP55157 894 aa6.7□□□□□ -1.34
TDP1-215ENST00000556498 PPP2R3AQ06190 1150 aa6.7□□□□□ -1.34
TDP1-215ENST00000556498 PPP2R5CQ13362 524 aa6.7□□□□□ -1.34
TDP1-215ENST00000556498 ANO4Q32M45 955 aa6.7□□□□□ -1.34
TDP1-215ENST00000556498 TRAPPC3LQ5T215 181 aa6.7□□□□□ -1.34
TDP1-215ENST00000556498 TMTC4Q5T4D3 741 aa6.7□□□□□ -1.34
TDP1-215ENST00000556498 RNASEH2BQ5TBB1 312 aaKnown RBP6.7□□□□□ -1.34
TDP1-215ENST00000556498 FBXW10Q5XX13 1052 aa6.7□□□□□ -1.34
TDP1-215ENST00000556498 LINC00114Q6XXX2 140 aa6.7□□□□□ -1.34
TDP1-215ENST00000556498 ZNF600Q6ZNG1 722 aa6.7□□□□□ -1.34
TDP1-215ENST00000556498 C3orf62Q6ZUJ4 267 aa6.7□□□□□ -1.34
TDP1-215ENST00000556498 TAOK1Q7L7X3 1001 aa6.7□□□□□ -1.34
TDP1-215ENST00000556498 ERMP1Q7Z2K6 904 aa6.7□□□□□ -1.34
TDP1-215ENST00000556498 LRRTM3Q86VH5 581 aa6.7□□□□□ -1.34
TDP1-215ENST00000556498 NLRP14Q86W24 1093 aa6.7□□□□□ -1.34
TDP1-215ENST00000556498 DMRTC2Q8IXT2 367 aaPredicted RBP6.7□□□□□ -1.34
TDP1-215ENST00000556498 NPLOC4Q8TAT6 608 aa6.7□□□□□ -1.34
TDP1-215ENST00000556498 DQX1Q8TE96 717 aaKnown RBP6.7□□□□□ -1.34
TDP1-215ENST00000556498 ZNF606Q8WXB4 792 aa6.7□□□□□ -1.34
TDP1-215ENST00000556498 LPIN2Q92539 896 aa6.7□□□□□ -1.34
TDP1-215ENST00000556498 WNT8BQ93098 351 aa6.7□□□□□ -1.34
TDP1-215ENST00000556498 TSR2Q969E8 191 aaKnown RBP6.7□□□□□ -1.34
TDP1-215ENST00000556498 ACSBG1Q96GR2 724 aa6.7□□□□□ -1.34
TDP1-215ENST00000556498 MED30Q96HR3 178 aa6.7□□□□□ -1.34
TDP1-215ENST00000556498 MPHOSPH9Q99550 1183 aa6.7□□□□□ -1.34
TDP1-215ENST00000556498 RSRP1Q9BUV0 290 aa6.7□□□□□ -1.34
TDP1-215ENST00000556498 FOXP3Q9BZS1 431 aa6.7□□□□□ -1.34
TDP1-215ENST00000556498 GBP3Q9H0R5 595 aa6.7□□□□□ -1.34
TDP1-215ENST00000556498 GOLPH3LQ9H4A5 285 aa6.7□□□□□ -1.34
TDP1-215ENST00000556498 CLSTN2Q9H4D0 955 aa6.7□□□□□ -1.34
TDP1-215ENST00000556498 SOX17Q9H6I2 414 aaPredicted RBP6.7□□□□□ -1.34
TDP1-215ENST00000556498 CYP4F12Q9HCS2 524 aa6.7□□□□□ -1.34
TDP1-215ENST00000556498 XAB2Q9HCS7 855 aaKnown RBP6.7□□□□□ -1.34
TDP1-215ENST00000556498 SLC39A2Q9NP94 309 aa6.7□□□□□ -1.34
TDP1-215ENST00000556498 NGRNQ9NPE2 291 aaKnown RBP6.7□□□□□ -1.34
TDP1-215ENST00000556498 CHST12Q9NRB3 414 aa6.7□□□□□ -1.34
TDP1-215ENST00000556498 KIF17Q9P2E2 1029 aa6.7□□□□□ -1.34
TDP1-215ENST00000556498 GGT7Q9UJ14 662 aa6.7□□□□□ -1.34
TDP1-215ENST00000556498 RIMKLBQ9ULI2 386 aa6.7□□□□□ -1.34
TDP1-215ENST00000556498 ADAMTS8Q9UP79 889 aa6.7□□□□□ -1.34
TDP1-215ENST00000556498 CFL2Q9Y281 166 aa6.7□□□□□ -1.34
TDP1-215ENST00000556498 FGD5Q6ZNL6 1462 aa6.69□□□□□ -1.34
TDP1-215ENST00000556498 MACROD2A1Z1Q3 448 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms