RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 TMCO2Q7Z6W1 182 aaPredicted RBP10.73□□□□□ -0.69
SRP54-210ENST00000556380 RHPN2Q8IUC4 686 aa10.73□□□□□ -0.69
SRP54-210ENST00000556380 ASAP3Q8TDY4 903 aa10.73□□□□□ -0.69
SRP54-210ENST00000556380 TCP11Q8WWU5 503 aa10.73□□□□□ -0.69
SRP54-210ENST00000556380 PSPC1Q8WXF1 523 aaKnown RBP10.73□□□□□ -0.69
SRP54-210ENST00000556380 TOP1MTQ969P6 601 aa10.73□□□□□ -0.69
SRP54-210ENST00000556380 ZNF396Q96N95 335 aaPredicted RBP10.73□□□□□ -0.69
SRP54-210ENST00000556380 CLIC6Q96NY7 704 aa10.73□□□□□ -0.69
SRP54-210ENST00000556380 MTRQ99707 1265 aa10.73□□□□□ -0.69
SRP54-210ENST00000556380 FDXACB1Q9BRP7 624 aaPredicted RBP10.73□□□□□ -0.69
SRP54-210ENST00000556380 FTHL17Q9BXU8 183 aa10.73□□□□□ -0.69
SRP54-210ENST00000556380 GCOM2Q9BZD3 368 aaPredicted RBP10.73□□□□□ -0.69
SRP54-210ENST00000556380 CCSER1Q9C0I3 900 aa10.73□□□□□ -0.69
SRP54-210ENST00000556380 CSRNP2Q9H175 543 aa10.73□□□□□ -0.69
SRP54-210ENST00000556380 BHMT2Q9H2M3 363 aa10.73□□□□□ -0.69
SRP54-210ENST00000556380 ATP6V0A4Q9HBG4 840 aa10.73□□□□□ -0.69
SRP54-210ENST00000556380 DNM3Q9UQ16 869 aa10.73□□□□□ -0.69
SRP54-210ENST00000556380 YBX2Q9Y2T7 364 aaKnown RBP10.73□□□□□ -0.69
SRP54-210ENST00000556380 COL4A3BPQ9Y5P4 624 aa10.73□□□□□ -0.69
SRP54-210ENST00000556380 ARHGEF35A5YM69 484 aa10.72□□□□□ -0.69
SRP54-210ENST00000556380 GPR182O15218 404 aa10.72□□□□□ -0.69
SRP54-210ENST00000556380 USO1O60763 962 aaKnown RBP10.72□□□□□ -0.69
SRP54-210ENST00000556380 YEATS4O95619 227 aa10.72□□□□□ -0.69
SRP54-210ENST00000556380 SRGAP2CP0DJJ0 459 aa10.72□□□□□ -0.69
SRP54-210ENST00000556380 MYOGP15173 224 aa10.72□□□□□ -0.69
SRP54-210ENST00000556380 DNAJB2P25686 324 aa10.72□□□□□ -0.69
SRP54-210ENST00000556380 UBA7P41226 1012 aa10.72□□□□□ -0.69
SRP54-210ENST00000556380 KCNJ6P48051 423 aa10.72□□□□□ -0.69
SRP54-210ENST00000556380 PTENP60484 403 aa10.72□□□□□ -0.69
SRP54-210ENST00000556380 POU5F1BQ06416 359 aa10.72□□□□□ -0.69
SRP54-210ENST00000556380 PAK2Q13177 524 aa10.72□□□□□ -0.69
SRP54-210ENST00000556380 MXD4Q14582 209 aaPredicted RBP10.72□□□□□ -0.69
SRP54-210ENST00000556380 ATL3Q6DD88 541 aa10.72□□□□□ -0.69
SRP54-210ENST00000556380 C1orf186Q6ZWK4 172 aa10.72□□□□□ -0.69
SRP54-210ENST00000556380 CABP7Q86V35 215 aa10.72□□□□□ -0.69
SRP54-210ENST00000556380 SYT2Q8N9I0 419 aaPredicted RBP10.72□□□□□ -0.69
SRP54-210ENST00000556380 TTC13Q8NBP0 860 aa10.72□□□□□ -0.69
SRP54-210ENST00000556380 MCPH1Q8NEM0 835 aa10.72□□□□□ -0.69
SRP54-210ENST00000556380 NLRP7Q8WX94 980 aa10.72□□□□□ -0.69
SRP54-210ENST00000556380 EPSTI1Q96J88 318 aa10.72□□□□□ -0.69
SRP54-210ENST00000556380 TTYH1Q9H313 450 aaPredicted RBP10.72□□□□□ -0.69
SRP54-210ENST00000556380 MINDY3Q9H8M7 445 aa10.72□□□□□ -0.69
SRP54-210ENST00000556380 GPRC5CQ9NQ84 441 aa10.72□□□□□ -0.69
SRP54-210ENST00000556380 RGS18Q9NS28 235 aa10.72□□□□□ -0.69
SRP54-210ENST00000556380 BLOC1S4Q9NUP1 217 aa10.72□□□□□ -0.69
SRP54-210ENST00000556380 RCOR1Q9UKL0 485 aa10.72□□□□□ -0.69
SRP54-210ENST00000556380 PCDHA11Q9Y5I1 949 aa10.72□□□□□ -0.69
SRP54-210ENST00000556380 SPTLC2O15270 562 aa10.71□□□□□ -0.69
SRP54-210ENST00000556380 PPP6R2O75170 966 aa10.71□□□□□ -0.69
SRP54-210ENST00000556380 ARHGEF15O94989 841 aa10.71□□□□□ -0.69
SRP54-210ENST00000556380 AMHP03971 560 aa10.71□□□□□ -0.69
SRP54-210ENST00000556380 FGFR4P22455 802 aa10.71□□□□□ -0.69
SRP54-210ENST00000556380 TTC3P53804 2025 aa10.71□□□□□ -0.69
SRP54-210ENST00000556380 SLC12A3P55017 1021 aa10.71□□□□□ -0.69
SRP54-210ENST00000556380 HTRA4P83105 476 aaPredicted RBP10.71□□□□□ -0.69
SRP54-210ENST00000556380 DNM1Q05193 864 aaKnown RBP10.71□□□□□ -0.69
SRP54-210ENST00000556380 NFX1Q12986 1120 aaKnown RBP10.71□□□□□ -0.69
SRP54-210ENST00000556380 CAPSQ13938 189 aa10.71□□□□□ -0.69
SRP54-210ENST00000556380 KARSQ15046 597 aaKnown RBP10.71□□□□□ -0.69
SRP54-210ENST00000556380 STK38Q15208 465 aa10.71□□□□□ -0.69
SRP54-210ENST00000556380 RAB30Q15771 203 aa10.71□□□□□ -0.69
SRP54-210ENST00000556380 ARSHQ5FYA8 562 aa10.71□□□□□ -0.69
SRP54-210ENST00000556380 SPECC1Q5M775 1068 aa10.71□□□□□ -0.69
SRP54-210ENST00000556380 ODR4Q5SWX8 454 aa10.71□□□□□ -0.69
SRP54-210ENST00000556380 AXDND1Q5T1B0 1012 aaPredicted RBP10.71□□□□□ -0.69
SRP54-210ENST00000556380 RINT1Q6NUQ1 792 aa10.71□□□□□ -0.69
SRP54-210ENST00000556380 SRGAP1Q7Z6B7 1085 aa10.71□□□□□ -0.69
SRP54-210ENST00000556380 DAW1Q8N136 415 aa10.71□□□□□ -0.69
SRP54-210ENST00000556380 KRI1Q8N9T8 703 aaKnown RBP10.71□□□□□ -0.69
SRP54-210ENST00000556380 BSNDQ8WZ55 320 aa10.71□□□□□ -0.69
SRP54-210ENST00000556380 TIFAQ96CG3 184 aa10.71□□□□□ -0.69
SRP54-210ENST00000556380 NLRP4Q96MN2 994 aa10.71□□□□□ -0.69
SRP54-210ENST00000556380 PLIN2Q99541 437 aa10.71□□□□□ -0.69
SRP54-210ENST00000556380 RAD9AQ99638 391 aa10.71□□□□□ -0.69
SRP54-210ENST00000556380 RUSC1Q9BVN2 902 aa10.71□□□□□ -0.69
SRP54-210ENST00000556380 NFKBIZQ9BYH8 718 aa10.71□□□□□ -0.69
SRP54-210ENST00000556380 NT5C3AQ9H0P0 336 aa10.71□□□□□ -0.69
SRP54-210ENST00000556380 POLR3FQ9H1D9 316 aaPredicted RBP10.71□□□□□ -0.69
SRP54-210ENST00000556380 SEMA6BQ9H3T3 888 aa10.71□□□□□ -0.69
SRP54-210ENST00000556380 POLD4Q9HCU8 107 aa10.71□□□□□ -0.69
SRP54-210ENST00000556380 TMEM265A0A087WTH1 108 aa10.7□□□□□ -0.7
SRP54-210ENST00000556380 C9IYK1 514 aa10.7□□□□□ -0.7
SRP54-210ENST00000556380 PLA2G4BP0C869 781 aa10.7□□□□□ -0.7
SRP54-210ENST00000556380 PLCG1P19174 1290 aa10.7□□□□□ -0.7
SRP54-210ENST00000556380 GUCY2CP25092 1073 aa10.7□□□□□ -0.7
SRP54-210ENST00000556380 HOXA11P31270 313 aaPredicted RBP10.7□□□□□ -0.7
SRP54-210ENST00000556380 MAPK7Q13164 816 aa10.7□□□□□ -0.7
SRP54-210ENST00000556380 ZRSR1Q15695 479 aaKnown RBP10.7□□□□□ -0.7
SRP54-210ENST00000556380 AMHR2Q16671 573 aa10.7□□□□□ -0.7
SRP54-210ENST00000556380 FOXD4L6Q3SYB3 417 aaPredicted RBP10.7□□□□□ -0.7
SRP54-210ENST00000556380 FAM102BQ5T8I3 360 aa10.7□□□□□ -0.7
SRP54-210ENST00000556380 FOXD4L3Q6VB84 417 aaPredicted RBP10.7□□□□□ -0.7
SRP54-210ENST00000556380 MAEAQ7L5Y9 396 aa10.7□□□□□ -0.7
SRP54-210ENST00000556380 MYOCDQ8IZQ8 938 aa10.7□□□□□ -0.7
SRP54-210ENST00000556380 RNF149Q8NC42 400 aa10.7□□□□□ -0.7
SRP54-210ENST00000556380 SYMPKQ92797 1274 aaKnown RBP10.7□□□□□ -0.7
SRP54-210ENST00000556380 CHAMP1Q96JM3 812 aa10.7□□□□□ -0.7
SRP54-210ENST00000556380 CCDC43Q96MW1 224 aaKnown RBP10.7□□□□□ -0.7
SRP54-210ENST00000556380 ADAM2Q99965 735 aa10.7□□□□□ -0.7
SRP54-210ENST00000556380 TRAIPQ9BWF2 469 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms