RNA–Protein interactions for RNA: ENST00000555816.5

ATXN3-233, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-233ENST00000555816 GRAPQ13588 217 aa6.36□□□□□ -1.39
ATXN3-233ENST00000555816 DCTN1Q14203 1278 aa6.36□□□□□ -1.39
ATXN3-233ENST00000555816 MBLAC2Q68D91 279 aa6.36□□□□□ -1.39
ATXN3-233ENST00000555816 FBXO46Q6PJ61 603 aaPredicted RBP6.36□□□□□ -1.39
ATXN3-233ENST00000555816 PLEKHH3Q7Z736 793 aa6.36□□□□□ -1.39
ATXN3-233ENST00000555816 TXNDC5Q8NBS9 432 aaKnown RBP6.36□□□□□ -1.39
ATXN3-233ENST00000555816 GRAPLQ8TC17 118 aaPredicted RBP6.36□□□□□ -1.39
ATXN3-233ENST00000555816 FRS2Q8WU20 508 aa6.36□□□□□ -1.39
ATXN3-233ENST00000555816 LCORQ96JN0 433 aaPredicted RBP6.36□□□□□ -1.39
ATXN3-233ENST00000555816 CFAP53Q96M91 514 aa6.36□□□□□ -1.39
ATXN3-233ENST00000555816 INVSQ9Y283 1065 aa6.36□□□□□ -1.39
ATXN3-233ENST00000555816 INPP5FQ9Y2H2 1132 aa6.36□□□□□ -1.39
ATXN3-233ENST00000555816 SCN7AQ01118 1682 aa6.36□□□□□ -1.39
ATXN3-233ENST00000555816 U2AF1L5P0DN76 240 aaPredicted RBP6.35□□□□□ -1.39
ATXN3-233ENST00000555816 TM4SF4P48230 202 aa6.35□□□□□ -1.39
ATXN3-233ENST00000555816 ITGA1P56199 1179 aa6.35□□□□□ -1.39
ATXN3-233ENST00000555816 EIF4A1P60842 406 aaKnown RBP6.35□□□□□ -1.39
ATXN3-233ENST00000555816 U2AF1Q01081 240 aaKnown RBP eCLIP6.35□□□□□ -1.39
ATXN3-233ENST00000555816 INF2Q27J81 1249 aa6.35□□□□□ -1.39
ATXN3-233ENST00000555816 HSP90AB3PQ58FF7 597 aa6.35□□□□□ -1.39
ATXN3-233ENST00000555816 ACBD5Q5T8D3 534 aaPredicted RBP6.35□□□□□ -1.39
ATXN3-233ENST00000555816 GLB1LQ6UWU2 654 aa6.35□□□□□ -1.39
ATXN3-233ENST00000555816 RASAL3Q86YV0 1011 aa6.35□□□□□ -1.39
ATXN3-233ENST00000555816 TEX2Q8IWB9 1127 aa6.35□□□□□ -1.39
ATXN3-233ENST00000555816 SLC43A3Q8NBI5 491 aa6.35□□□□□ -1.39
ATXN3-233ENST00000555816 DIO2Q92813 273 aa6.35□□□□□ -1.39
ATXN3-233ENST00000555816 CDCA5Q96FF9 252 aa6.35□□□□□ -1.39
ATXN3-233ENST00000555816 TRMT2BQ96GJ1 504 aaKnown RBP6.35□□□□□ -1.39
ATXN3-233ENST00000555816 LOXL4Q96JB6 756 aa6.35□□□□□ -1.39
ATXN3-233ENST00000555816 CASP8AP2Q9UKL3 1982 aa6.35□□□□□ -1.39
ATXN3-233ENST00000555816 PDE4DIPQ5VU43 2346 aa6.34□□□□□ -1.39
ATXN3-233ENST00000555816 UBR2Q8IWV8 1755 aa6.34□□□□□ -1.39
ATXN3-233ENST00000555816 CLSPNQ9HAW4 1339 aa6.34□□□□□ -1.39
ATXN3-233ENST00000555816 H7BY64 318 aa6.34□□□□□ -1.39
ATXN3-233ENST00000555816 HGSO14964 777 aaPredicted RBP6.34□□□□□ -1.39
ATXN3-233ENST00000555816 VIL1P09327 827 aaKnown RBP6.34□□□□□ -1.39
ATXN3-233ENST00000555816 TNFRSF1AP19438 455 aa6.34□□□□□ -1.39
ATXN3-233ENST00000555816 CEP68Q76N32 757 aa6.34□□□□□ -1.39
ATXN3-233ENST00000555816 CHST13Q8NET6 341 aa6.34□□□□□ -1.39
ATXN3-233ENST00000555816 SREK1Q8WXA9 508 aaKnown RBP6.34□□□□□ -1.39
ATXN3-233ENST00000555816 DVL3Q92997 716 aaPredicted RBP6.34□□□□□ -1.39
ATXN3-233ENST00000555816 TMEM169Q96HH4 297 aa6.34□□□□□ -1.39
ATXN3-233ENST00000555816 WRNIP1Q96S55 665 aa6.34□□□□□ -1.39
ATXN3-233ENST00000555816 EYA3Q99504 573 aa6.34□□□□□ -1.39
ATXN3-233ENST00000555816 DBNDD1Q9H9R9 158 aa6.34□□□□□ -1.39
ATXN3-233ENST00000555816 COA3Q9Y2R0 106 aaPredicted RBP6.34□□□□□ -1.39
ATXN3-233ENST00000555816 ZNF536O15090 1300 aa6.33□□□□□ -1.4
ATXN3-233ENST00000555816 UBE2Q2LH0YL09 131 aa6.33□□□□□ -1.4
ATXN3-233ENST00000555816 ECE2O60344 883 aa6.33□□□□□ -1.4
ATXN3-233ENST00000555816 ZNF20P17024 532 aa6.33□□□□□ -1.4
ATXN3-233ENST00000555816 ZNF280AP59817 542 aaPredicted RBP6.33□□□□□ -1.4
ATXN3-233ENST00000555816 TCIRG1Q13488 830 aa6.33□□□□□ -1.4
ATXN3-233ENST00000555816 CNGB1Q14028 1251 aaPredicted RBP6.33□□□□□ -1.4
ATXN3-233ENST00000555816 MCTP2Q6DN12 878 aa6.33□□□□□ -1.4
ATXN3-233ENST00000555816 NLRP10Q86W26 655 aa6.33□□□□□ -1.4
ATXN3-233ENST00000555816 FAM169BQ8N8A8 192 aa6.33□□□□□ -1.4
ATXN3-233ENST00000555816 AGBL3Q8NEM8 1001 aa6.33□□□□□ -1.4
ATXN3-233ENST00000555816 TOE1Q96GM8 510 aaKnown RBP6.33□□□□□ -1.4
ATXN3-233ENST00000555816 YIPF4Q9BSR8 244 aa6.33□□□□□ -1.4
ATXN3-233ENST00000555816 GGA3Q9NZ52 723 aa6.33□□□□□ -1.4
ATXN3-233ENST00000555816 HSPBP1Q9NZL4 362 aa6.33□□□□□ -1.4
ATXN3-233ENST00000555816 POLLQ9UGP5 575 aa6.33□□□□□ -1.4
ATXN3-233ENST00000555816 TRMT112Q9UI30 125 aaKnown RBP6.33□□□□□ -1.4
ATXN3-233ENST00000555816 ARFGEF2Q9Y6D5 1785 aa6.33□□□□□ -1.4
ATXN3-233ENST00000555816 ASTN2O75129 1339 aaPredicted RBP6.32□□□□□ -1.4
ATXN3-233ENST00000555816 SH3TC1Q8TE82 1336 aa6.32□□□□□ -1.4
ATXN3-233ENST00000555816 DDX3XO00571 662 aaKnown RBP eCLIP6.32□□□□□ -1.4
ATXN3-233ENST00000555816 MEFVO15553 781 aaPredicted RBP6.32□□□□□ -1.4
ATXN3-233ENST00000555816 FXR1P51114 621 aaKnown RBP eCLIP6.32□□□□□ -1.4
ATXN3-233ENST00000555816 INHBEP58166 350 aa6.32□□□□□ -1.4
ATXN3-233ENST00000555816 GPSM2P81274 684 aa6.32□□□□□ -1.4
ATXN3-233ENST00000555816 ZXDAP98168 799 aa6.32□□□□□ -1.4
ATXN3-233ENST00000555816 SREBF2Q12772 1141 aa6.32□□□□□ -1.4
ATXN3-233ENST00000555816 LSAMPQ13449 338 aa6.32□□□□□ -1.4
ATXN3-233ENST00000555816 GNL2Q13823 731 aaKnown RBP6.32□□□□□ -1.4
ATXN3-233ENST00000555816 SF3B3Q15393 1217 aaKnown RBP6.32□□□□□ -1.4
ATXN3-233ENST00000555816 CR1LQ2VPA4 569 aa6.32□□□□□ -1.4
ATXN3-233ENST00000555816 TNNI3KQ59H18 835 aa6.32□□□□□ -1.4
ATXN3-233ENST00000555816 LRP10Q7Z4F1 713 aa6.32□□□□□ -1.4
ATXN3-233ENST00000555816 VPS37DQ86XT2 251 aa6.32□□□□□ -1.4
ATXN3-233ENST00000555816 FAM26EQ8N5C1 309 aa6.32□□□□□ -1.4
ATXN3-233ENST00000555816 TBC1D16Q8TBP0 767 aa6.32□□□□□ -1.4
ATXN3-233ENST00000555816 PPP1R14AQ96A00 147 aa6.32□□□□□ -1.4
ATXN3-233ENST00000555816 DRC1Q96MC2 740 aa6.32□□□□□ -1.4
ATXN3-233ENST00000555816 C8orf49Q96NF6 230 aa6.32□□□□□ -1.4
ATXN3-233ENST00000555816 CLIC6Q96NY7 704 aa6.32□□□□□ -1.4
ATXN3-233ENST00000555816 CDK5RAP1Q96SZ6 601 aaKnown RBP6.32□□□□□ -1.4
ATXN3-233ENST00000555816 THUMPD2Q9BTF0 503 aaKnown RBP6.32□□□□□ -1.4
ATXN3-233ENST00000555816 SSBP3Q9BWW4 388 aaPredicted RBP6.32□□□□□ -1.4
ATXN3-233ENST00000555816 KRTAP3-1Q9BYR8 98 aa6.32□□□□□ -1.4
ATXN3-233ENST00000555816 CACNA1SQ13698 1873 aa6.32□□□□□ -1.4
ATXN3-233ENST00000555816 RTL9Q8NET4 1388 aa6.31□□□□□ -1.4
ATXN3-233ENST00000555816 COL3A1P02461 1466 aaPredicted RBP6.31□□□□□ -1.4
ATXN3-233ENST00000555816 MAFKO60675 156 aa6.31□□□□□ -1.4
ATXN3-233ENST00000555816 ZNF28P17035 718 aa6.31□□□□□ -1.4
ATXN3-233ENST00000555816 EIF2S2P20042 333 aaKnown RBP6.31□□□□□ -1.4
ATXN3-233ENST00000555816 LTBRP36941 435 aa6.31□□□□□ -1.4
ATXN3-233ENST00000555816 BCL6P41182 706 aa6.31□□□□□ -1.4
ATXN3-233ENST00000555816 RPS8P62241 208 aaKnown RBP6.31□□□□□ -1.4
ATXN3-233ENST00000555816 CYP4F3Q08477 520 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms