RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 PPP2R3BQ9Y5P8 575 aa26.41■■□□□ 1.82
TMEM260-207ENST00000555497 GOLGA8IPA6NC78 632 aa26.41■■□□□ 1.82
TMEM260-207ENST00000555497 GOLGA8JA6NMD2 632 aa26.41■■□□□ 1.82
TMEM260-207ENST00000555497 ADSSP30520 456 aa26.41■■□□□ 1.82
TMEM260-207ENST00000555497 MATR3P43243 847 aaKnown RBP eCLIP26.41■■□□□ 1.82
TMEM260-207ENST00000555497 MRPS25P82663 173 aaKnown RBP26.41■■□□□ 1.82
TMEM260-207ENST00000555497 CCDC169A6NNP5 214 aa26.4■■□□□ 1.82
TMEM260-207ENST00000555497 H3BQF6 201 aa26.4■■□□□ 1.82
TMEM260-207ENST00000555497 ADRB2P07550 413 aa26.4■■□□□ 1.82
TMEM260-207ENST00000555497 MYBL2P10244 700 aa26.4■■□□□ 1.82
TMEM260-207ENST00000555497 OAS2P29728 719 aaKnown RBP26.4■■□□□ 1.82
TMEM260-207ENST00000555497 GCLMP48507 274 aa26.4■■□□□ 1.82
TMEM260-207ENST00000555497 FSTL1Q12841 308 aa26.4■■□□□ 1.82
TMEM260-207ENST00000555497 CASP8Q14790 479 aa26.4■■□□□ 1.82
TMEM260-207ENST00000555497 ARHGAP44Q17R89 818 aa26.4■■□□□ 1.82
TMEM260-207ENST00000555497 PPP1R3FQ6ZSY5 799 aaPredicted RBP26.4■■□□□ 1.82
TMEM260-207ENST00000555497 HOXC10Q9NYD6 342 aa26.4■■□□□ 1.82
TMEM260-207ENST00000555497 TBX20Q9UMR3 447 aa26.4■■□□□ 1.82
TMEM260-207ENST00000555497 ARID2Q68CP9 1835 aa26.4■■□□□ 1.82
TMEM260-207ENST00000555497 DICER1Q9UPY3 1922 aaKnown RBP26.4■■□□□ 1.82
TMEM260-207ENST00000555497 POLR3GO15318 223 aaPredicted RBP26.39■■□□□ 1.82
TMEM260-207ENST00000555497 CCDC181Q5TID7 509 aa26.39■■□□□ 1.82
TMEM260-207ENST00000555497 CCDC60Q8IWA6 550 aaPredicted RBP26.39■■□□□ 1.82
TMEM260-207ENST00000555497 CNKSR2Q8WXI2 1034 aa26.39■■□□□ 1.82
TMEM260-207ENST00000555497 CEP170P1Q96L14 293 aa26.39■■□□□ 1.82
TMEM260-207ENST00000555497 SNCAIPQ9Y6H5 919 aa26.39■■□□□ 1.82
TMEM260-207ENST00000555497 PFASO15067 1338 aa26.39■■□□□ 1.82
TMEM260-207ENST00000555497 SUPT20HL1Q3ZLR7 823 aa26.39■■□□□ 1.81
TMEM260-207ENST00000555497 SH3D19Q5HYK7 790 aa26.39■■□□□ 1.81
TMEM260-207ENST00000555497 GLYCTKQ8IVS8 523 aa26.39■■□□□ 1.81
TMEM260-207ENST00000555497 LRRC57Q8N9N7 239 aa26.39■■□□□ 1.81
TMEM260-207ENST00000555497 JPH1Q9HDC5 661 aaPredicted RBP26.39■■□□□ 1.81
TMEM260-207ENST00000555497 RBM12Q9NTZ6 932 aaKnown RBP26.39■■□□□ 1.81
TMEM260-207ENST00000555497 LRRIQ3A6PVS8 624 aaPredicted RBP26.38■■□□□ 1.81
TMEM260-207ENST00000555497 SPATA31C2B4DYI2 1134 aa26.38■■□□□ 1.81
TMEM260-207ENST00000555497 FOXN3O00409 490 aaPredicted RBP26.38■■□□□ 1.81
TMEM260-207ENST00000555497 SP2Q02086 613 aa26.38■■□□□ 1.81
TMEM260-207ENST00000555497 VGLL4Q14135 290 aa26.38■■□□□ 1.81
TMEM260-207ENST00000555497 TREML2Q5T2D2 321 aa26.38■■□□□ 1.81
TMEM260-207ENST00000555497 VPS36Q86VN1 386 aa26.38■■□□□ 1.81
TMEM260-207ENST00000555497 ARHGEF19Q8IW93 802 aa26.38■■□□□ 1.81
TMEM260-207ENST00000555497 GSPT2Q8IYD1 628 aaKnown RBP26.38■■□□□ 1.81
TMEM260-207ENST00000555497 DMGDHQ9UI17 866 aaKnown RBP26.38■■□□□ 1.81
TMEM260-207ENST00000555497 H2AFZP0C0S5 128 aa26.38■■□□□ 1.81
TMEM260-207ENST00000555497 PAFAH1B1P43034 410 aa26.38■■□□□ 1.81
TMEM260-207ENST00000555497 ACTR2P61160 394 aa26.38■■□□□ 1.81
TMEM260-207ENST00000555497 EPC2Q52LR7 807 aa26.38■■□□□ 1.81
TMEM260-207ENST00000555497 CCNI2Q6ZMN8 369 aaPredicted RBP26.38■■□□□ 1.81
TMEM260-207ENST00000555497 H2AFVQ71UI9 128 aa26.38■■□□□ 1.81
TMEM260-207ENST00000555497 PDE11AQ9HCR9 933 aa26.38■■□□□ 1.81
TMEM260-207ENST00000555497 SLC9A2Q9UBY0 812 aa26.38■■□□□ 1.81
TMEM260-207ENST00000555497 PTPRFP10586 1907 aa26.37■■□□□ 1.81
TMEM260-207ENST00000555497 NFASCO94856 1347 aa26.37■■□□□ 1.81
TMEM260-207ENST00000555497 NOP2P46087 812 aaKnown RBP26.37■■□□□ 1.81
TMEM260-207ENST00000555497 CNTN2Q02246 1040 aa26.37■■□□□ 1.81
TMEM260-207ENST00000555497 ABHD15Q6UXT9 468 aa26.37■■□□□ 1.81
TMEM260-207ENST00000555497 OTUD6AQ7L8S5 288 aa26.37■■□□□ 1.81
TMEM260-207ENST00000555497 CBWD2Q8IUF1 395 aa26.37■■□□□ 1.81
TMEM260-207ENST00000555497 PDLIM7Q9NR12 457 aa26.37■■□□□ 1.81
TMEM260-207ENST00000555497 DENND3A2RUS2 1198 aa26.37■■□□□ 1.81
TMEM260-207ENST00000555497 PSAPP07602 524 aa26.37■■□□□ 1.81
TMEM260-207ENST00000555497 LMNB1P20700 586 aa26.37■■□□□ 1.81
TMEM260-207ENST00000555497 GALCP54803 685 aa26.37■■□□□ 1.81
TMEM260-207ENST00000555497 SLC39A4Q6P5W5 647 aa26.37■■□□□ 1.81
TMEM260-207ENST00000555497 MAP4K3Q8IVH8 894 aa26.37■■□□□ 1.81
TMEM260-207ENST00000555497 TPCN2Q8NHX9 752 aa26.37■■□□□ 1.81
TMEM260-207ENST00000555497 ATP6V0A1Q93050 837 aa26.37■■□□□ 1.81
TMEM260-207ENST00000555497 SAAL1Q96ER3 474 aa26.37■■□□□ 1.81
TMEM260-207ENST00000555497 IWS1Q96ST2 819 aa26.37■■□□□ 1.81
TMEM260-207ENST00000555497 XPNPEP1Q9NQW7 623 aa26.37■■□□□ 1.81
TMEM260-207ENST00000555497 LOC285556D6RIA3 1793 aa26.36■■□□□ 1.81
TMEM260-207ENST00000555497 ADGRA3Q8IWK6 1321 aa26.36■■□□□ 1.81
TMEM260-207ENST00000555497 FAM170AA1A519 330 aa26.36■■□□□ 1.81
TMEM260-207ENST00000555497 SNRPFP62306 86 aaKnown RBP26.36■■□□□ 1.81
TMEM260-207ENST00000555497 DMP1Q13316 513 aaPredicted RBP26.36■■□□□ 1.81
TMEM260-207ENST00000555497 PTPROQ16827 1216 aa26.36■■□□□ 1.81
TMEM260-207ENST00000555497 CFAP221Q4G0U5 840 aa26.36■■□□□ 1.81
TMEM260-207ENST00000555497 NTPCRQ9BSD7 190 aaKnown RBP26.36■■□□□ 1.81
TMEM260-207ENST00000555497 UBE2TQ9NPD8 197 aaPredicted RBP26.36■■□□□ 1.81
TMEM260-207ENST00000555497 KMT5AQ9NQR1 393 aa26.36■■□□□ 1.81
TMEM260-207ENST00000555497 ATP8B3O60423 1300 aa26.36■■□□□ 1.81
TMEM260-207ENST00000555497 MAPK13O15264 365 aa26.35■■□□□ 1.81
TMEM260-207ENST00000555497 DDNO94850 711 aaPredicted RBP26.35■■□□□ 1.81
TMEM260-207ENST00000555497 MCM3P25205 808 aa26.35■■□□□ 1.81
TMEM260-207ENST00000555497 CNGA1P29973 690 aa26.35■■□□□ 1.81
TMEM260-207ENST00000555497 SMTNP53814 917 aa26.35■■□□□ 1.81
TMEM260-207ENST00000555497 SLC7A5Q01650 507 aa26.35■■□□□ 1.81
TMEM260-207ENST00000555497 TMEM117Q9H0C3 514 aa26.35■■□□□ 1.81
TMEM260-207ENST00000555497 SBF1O95248 1867 aa26.35■■□□□ 1.81
TMEM260-207ENST00000555497 MYPNQ86TC9 1320 aa26.35■■□□□ 1.81
TMEM260-207ENST00000555497 MYH9P35579 1960 aaKnown RBP26.35■■□□□ 1.81
TMEM260-207ENST00000555497 TMCO5BA8MYB1 307 aa26.35■■□□□ 1.81
TMEM260-207ENST00000555497 PRKCEQ02156 737 aa26.35■■□□□ 1.81
TMEM260-207ENST00000555497 PALB2Q86YC2 1186 aa26.35■■□□□ 1.81
TMEM260-207ENST00000555497 ZNF526Q8TF50 670 aaPredicted RBP26.35■■□□□ 1.81
TMEM260-207ENST00000555497 INTUQ9ULD6 942 aa26.35■■□□□ 1.81
TMEM260-207ENST00000555497 KIF22Q14807 665 aa26.34■■□□□ 1.81
TMEM260-207ENST00000555497 MSL3Q8N5Y2 521 aaKnown RBP26.34■■□□□ 1.81
TMEM260-207ENST00000555497 SLC17A8Q8NDX2 589 aa26.34■■□□□ 1.81
TMEM260-207ENST00000555497 SPIRE2Q8WWL2 714 aa26.34■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms