RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 BROXQ5VW32 411 aa7.15□□□□□ -1.26
VRK1-205ENST00000555402 RAVER1Q8IY67 606 aaKnown RBP7.15□□□□□ -1.26
VRK1-205ENST00000555402 THEMISQ8N1K5 641 aaPredicted RBP7.15□□□□□ -1.26
VRK1-205ENST00000555402 KIAA1958Q8N8K9 716 aa7.15□□□□□ -1.26
VRK1-205ENST00000555402 AHCYL2Q96HN2 611 aaKnown RBP7.15□□□□□ -1.26
VRK1-205ENST00000555402 KIAA1683Q9H0B3 1180 aa7.15□□□□□ -1.26
VRK1-205ENST00000555402 TOMM22Q9NS69 142 aa7.15□□□□□ -1.26
VRK1-205ENST00000555402 SRPK3Q9UPE1 567 aa7.15□□□□□ -1.26
VRK1-205ENST00000555402 ATP23Q9Y6H3 246 aa7.15□□□□□ -1.26
VRK1-205ENST00000555402 MAN2B1O00754 1011 aa7.14□□□□□ -1.27
VRK1-205ENST00000555402 FOXN1O15353 648 aa7.14□□□□□ -1.27
VRK1-205ENST00000555402 HMGCRP04035 888 aa7.14□□□□□ -1.27
VRK1-205ENST00000555402 ZBTB48P10074 688 aaPredicted RBP7.14□□□□□ -1.27
VRK1-205ENST00000555402 KCNQ1P51787 676 aa7.14□□□□□ -1.27
VRK1-205ENST00000555402 KIF11P52732 1056 aa7.14□□□□□ -1.27
VRK1-205ENST00000555402 SESN3P58005 492 aa7.14□□□□□ -1.27
VRK1-205ENST00000555402 FIGNQ5HY92 759 aa7.14□□□□□ -1.27
VRK1-205ENST00000555402 ADGRE4PQ86SQ3 457 aa7.14□□□□□ -1.27
VRK1-205ENST00000555402 ZBTB46Q86UZ6 589 aa7.14□□□□□ -1.27
VRK1-205ENST00000555402 GPR135Q8IZ08 494 aa7.14□□□□□ -1.27
VRK1-205ENST00000555402 SH3RF2Q8TEC5 729 aa7.14□□□□□ -1.27
VRK1-205ENST00000555402 AASDHPPTQ9NRN7 309 aa7.14□□□□□ -1.27
VRK1-205ENST00000555402 HECAQ9UBI9 543 aaPredicted RBP7.14□□□□□ -1.27
VRK1-205ENST00000555402 SPO11Q9Y5K1 396 aa7.14□□□□□ -1.27
VRK1-205ENST00000555402 KRTAP23-1A1A580 65 aa7.13□□□□□ -1.27
VRK1-205ENST00000555402 GABRDO14764 452 aa7.13□□□□□ -1.27
VRK1-205ENST00000555402 PEX11BO96011 259 aa7.13□□□□□ -1.27
VRK1-205ENST00000555402 BMP5P22003 454 aa7.13□□□□□ -1.27
VRK1-205ENST00000555402 TMEM132BQ14DG7 1078 aa7.13□□□□□ -1.27
VRK1-205ENST00000555402 PPP2R5AQ15172 486 aa7.13□□□□□ -1.27
VRK1-205ENST00000555402 CCDC181Q5TID7 509 aa7.13□□□□□ -1.27
VRK1-205ENST00000555402 CREB3L3Q68CJ9 461 aa7.13□□□□□ -1.27
VRK1-205ENST00000555402 NOSTRINQ8IVI9 506 aa7.13□□□□□ -1.27
VRK1-205ENST00000555402 CLRN3Q8NCR9 226 aa7.13□□□□□ -1.27
VRK1-205ENST00000555402 CCDC136Q96JN2 1154 aa7.13□□□□□ -1.27
VRK1-205ENST00000555402 ELF4Q99607 663 aaPredicted RBP7.13□□□□□ -1.27
VRK1-205ENST00000555402 VTA1Q9NP79 307 aa7.13□□□□□ -1.27
VRK1-205ENST00000555402 NOC2LQ9Y3T9 749 aaKnown RBP7.13□□□□□ -1.27
VRK1-205ENST00000555402 WASHC2AQ641Q2 1341 aa7.12□□□□□ -1.27
VRK1-205ENST00000555402 TGM5O43548 720 aa7.12□□□□□ -1.27
VRK1-205ENST00000555402 CLASP2O75122 1294 aaKnown RBP7.12□□□□□ -1.27
VRK1-205ENST00000555402 MYBL2P10244 700 aa7.12□□□□□ -1.27
VRK1-205ENST00000555402 CCND1P24385 295 aa7.12□□□□□ -1.27
VRK1-205ENST00000555402 LSP1P33241 339 aa7.12□□□□□ -1.27
VRK1-205ENST00000555402 MCL1Q07820 350 aa7.12□□□□□ -1.27
VRK1-205ENST00000555402 PTPN21Q16825 1174 aa7.12□□□□□ -1.27
VRK1-205ENST00000555402 BTBD8Q5XKL5 378 aa7.12□□□□□ -1.27
VRK1-205ENST00000555402 SPTY2D1Q68D10 685 aaPredicted RBP7.12□□□□□ -1.27
VRK1-205ENST00000555402 FSTL4Q6MZW2 842 aa7.12□□□□□ -1.27
VRK1-205ENST00000555402 CXXC5Q7LFL8 322 aaKnown RBP7.12□□□□□ -1.27
VRK1-205ENST00000555402 WDR75Q8IWA0 830 aaKnown RBP7.12□□□□□ -1.27
VRK1-205ENST00000555402 CHMP4CQ96CF2 233 aa7.12□□□□□ -1.27
VRK1-205ENST00000555402 NAF1Q96HR8 494 aaKnown RBP7.12□□□□□ -1.27
VRK1-205ENST00000555402 ACSS2Q9NR19 701 aa7.12□□□□□ -1.27
VRK1-205ENST00000555402 RIC8BQ9NVN3 520 aa7.12□□□□□ -1.27
VRK1-205ENST00000555402 FBXO10Q9UK96 956 aa7.12□□□□□ -1.27
VRK1-205ENST00000555402 SPEF1Q9Y4P9 236 aa7.12□□□□□ -1.27
VRK1-205ENST00000555402 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.11□□□□□ -1.27
VRK1-205ENST00000555402 CAPN14A8MX76 684 aa7.11□□□□□ -1.27
VRK1-205ENST00000555402 DVL2O14641 736 aa7.11□□□□□ -1.27
VRK1-205ENST00000555402 IL12RB1P42701 662 aa7.11□□□□□ -1.27
VRK1-205ENST00000555402 RAB27AP51159 221 aa7.11□□□□□ -1.27
VRK1-205ENST00000555402 IL13RA1P78552 427 aa7.11□□□□□ -1.27
VRK1-205ENST00000555402 EIF4HQ15056 248 aaKnown RBP7.11□□□□□ -1.27
VRK1-205ENST00000555402 ABCB5Q2M3G0 1257 aa7.11□□□□□ -1.27
VRK1-205ENST00000555402 LAIR1Q6GTX8 287 aa7.11□□□□□ -1.27
VRK1-205ENST00000555402 D2HGDHQ8N465 521 aa7.11□□□□□ -1.27
VRK1-205ENST00000555402 KCNH7Q9NS40 1196 aa7.11□□□□□ -1.27
VRK1-205ENST00000555402 C14orf119Q9NWQ9 140 aa7.11□□□□□ -1.27
VRK1-205ENST00000555402 ARHGAP28Q9P2N2 729 aa7.11□□□□□ -1.27
VRK1-205ENST00000555402 B3GALT1Q9Y5Z6 326 aa7.11□□□□□ -1.27
VRK1-205ENST00000555402 TNKSO95271 1327 aa7.1□□□□□ -1.27
VRK1-205ENST00000555402 TMEM191CA6NGB0 347 aa7.1□□□□□ -1.27
VRK1-205ENST00000555402 CYP27B1O15528 508 aa7.1□□□□□ -1.27
VRK1-205ENST00000555402 MT-CO1P00395 513 aa7.1□□□□□ -1.27
VRK1-205ENST00000555402 CYP17A1P05093 508 aa7.1□□□□□ -1.27
VRK1-205ENST00000555402 PTPN1P18031 435 aaKnown RBP7.1□□□□□ -1.27
VRK1-205ENST00000555402 PTX3P26022 381 aaPredicted RBP7.1□□□□□ -1.27
VRK1-205ENST00000555402 GJA4P35212 333 aa7.1□□□□□ -1.27
VRK1-205ENST00000555402 ADCY8P40145 1251 aa7.1□□□□□ -1.27
VRK1-205ENST00000555402 KLF1Q13351 362 aaPredicted RBP7.1□□□□□ -1.27
VRK1-205ENST00000555402 RRP1BQ14684 758 aaKnown RBP7.1□□□□□ -1.27
VRK1-205ENST00000555402 PCOLCEQ15113 449 aa7.1□□□□□ -1.27
VRK1-205ENST00000555402 TERF2Q15554 542 aa7.1□□□□□ -1.27
VRK1-205ENST00000555402 NFE2Q16621 373 aaPredicted RBP7.1□□□□□ -1.27
VRK1-205ENST00000555402 TRIM68Q6AZZ1 485 aa7.1□□□□□ -1.27
VRK1-205ENST00000555402 TSR2Q969E8 191 aaKnown RBP7.1□□□□□ -1.27
VRK1-205ENST00000555402 HOOK2Q96ED9 719 aa7.1□□□□□ -1.27
VRK1-205ENST00000555402 TMEM176AQ96HP8 235 aa7.1□□□□□ -1.27
VRK1-205ENST00000555402 ZIM2Q9NZV7 527 aa7.1□□□□□ -1.27
VRK1-205ENST00000555402 CDC42EP3Q9UKI2 254 aa7.1□□□□□ -1.27
VRK1-205ENST00000555402 SHTN1A0MZ66 631 aa7.09□□□□□ -1.27
VRK1-205ENST00000555402 PRAMEF25A6NGN4 478 aa7.09□□□□□ -1.27
VRK1-205ENST00000555402 FAM90A27PA6NNH2 459 aa7.09□□□□□ -1.27
VRK1-205ENST00000555402 AKAP10O43572 662 aa7.09□□□□□ -1.27
VRK1-205ENST00000555402 IARSP41252 1262 aaKnown RBP7.09□□□□□ -1.27
VRK1-205ENST00000555402 ATXN1P54253 815 aaKnown RBP7.09□□□□□ -1.27
VRK1-205ENST00000555402 SCAND1P57086 179 aa7.09□□□□□ -1.27
VRK1-205ENST00000555402 PHC1P78364 1004 aa7.09□□□□□ -1.27
VRK1-205ENST00000555402 SMAD3P84022 425 aaKnown RBP7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms